RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 TRIAP1O43715 76 aa4.05□□□□□ -1.76
CHFR-211ENST00000535897 DNAL4O96015 105 aa4.05□□□□□ -1.76
CHFR-211ENST00000535897 MT1FP04733 61 aa4.05□□□□□ -1.76
CHFR-211ENST00000535897 ACYP1P07311 99 aa4.05□□□□□ -1.76
CHFR-211ENST00000535897 LINC00575Q6W349 94 aa4.05□□□□□ -1.76
CHFR-211ENST00000535897 A0A1B0GX51 115 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 A8MUU9 505 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 H3BT86 120 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 ETDBQ3ZM63 59 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
CHFR-211ENST00000535897 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
CHFR-211ENST00000535897 H3BQ85 93 aa4.03□□□□□ -1.76
CHFR-211ENST00000535897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.03□□□□□ -1.76
CHFR-211ENST00000535897 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
CHFR-211ENST00000535897 C21orf62-AS1Q17RA5 79 aa4.02□□□□□ -1.77
CHFR-211ENST00000535897 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
CHFR-211ENST00000535897 IMUPQ9GZP8 106 aa4.02□□□□□ -1.77
CHFR-211ENST00000535897 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
CHFR-211ENST00000535897 DSCR10P59022 87 aa4.01□□□□□ -1.77
CHFR-211ENST00000535897 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
CHFR-211ENST00000535897 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
CHFR-211ENST00000535897 ORMDL1Q9P0S3 153 aa4□□□□□ -1.77
CHFR-211ENST00000535897 TMEM256-PLSCR3K7ERE1 68 aa3.99□□□□□ -1.77
CHFR-211ENST00000535897 TRACP01848 142 aa3.99□□□□□ -1.77
CHFR-211ENST00000535897 FAM218AQ96MZ4 157 aa3.99□□□□□ -1.77
CHFR-211ENST00000535897 A0A087WSZ3 146 aa3.98□□□□□ -1.77
CHFR-211ENST00000535897 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
CHFR-211ENST00000535897 C9JAW5 83 aa3.97□□□□□ -1.77
CHFR-211ENST00000535897 BAALC-AS2P0C853 105 aa3.96□□□□□ -1.78
CHFR-211ENST00000535897 LINC00313P59037 77 aa3.96□□□□□ -1.78
CHFR-211ENST00000535897 HRES1P13985 223 aa3.95□□□□□ -1.78
CHFR-211ENST00000535897 SMCPP49901 116 aaPredicted RBP3.95□□□□□ -1.78
CHFR-211ENST00000535897 NDUFV3P56181 108 aaKnown RBP3.95□□□□□ -1.78
CHFR-211ENST00000535897 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
CHFR-211ENST00000535897 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
CHFR-211ENST00000535897 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
CHFR-211ENST00000535897 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
CHFR-211ENST00000535897 LINC00643Q86TS7 51 aa3.93□□□□□ -1.78
CHFR-211ENST00000535897 JMJD7-PLA2G4BH0Y9G9 81 aa3.92□□□□□ -1.78
CHFR-211ENST00000535897 RBM3P98179 157 aaKnown RBP3.92□□□□□ -1.78
CHFR-211ENST00000535897 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
CHFR-211ENST00000535897 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
CHFR-211ENST00000535897 NEBP20929 6669 aa3.92□□□□□ -1.78
CHFR-211ENST00000535897 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
CHFR-211ENST00000535897 KRTAP3-3Q9BYR6 98 aa3.91□□□□□ -1.78
CHFR-211ENST00000535897 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
CHFR-211ENST00000535897 IGHV6-1A0A0B4J1U7 121 aa3.89□□□□□ -1.79
CHFR-211ENST00000535897 MT-ATP8P03928 68 aa3.89□□□□□ -1.79
CHFR-211ENST00000535897 PDE6GP18545 87 aa3.89□□□□□ -1.79
CHFR-211ENST00000535897 DEFB116Q30KQ4 102 aa3.89□□□□□ -1.79
CHFR-211ENST00000535897 ATP5EP2Q5VTU8 51 aa3.89□□□□□ -1.79
CHFR-211ENST00000535897 A0A1W2PNM2 257 aa3.88□□□□□ -1.79
CHFR-211ENST00000535897 A8MWP4 228 aa3.88□□□□□ -1.79
CHFR-211ENST00000535897 Q8N9P0 234 aaPredicted RBP3.88□□□□□ -1.79
CHFR-211ENST00000535897 CCKP06307 115 aa3.87□□□□□ -1.79
CHFR-211ENST00000535897 ATOX1O00244 68 aa3.86□□□□□ -1.79
CHFR-211ENST00000535897 UQCRQO14949 82 aa3.86□□□□□ -1.79
CHFR-211ENST00000535897 SPINK7P58062 85 aa3.86□□□□□ -1.79
CHFR-211ENST00000535897 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
CHFR-211ENST00000535897 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
CHFR-211ENST00000535897 SMIM20Q8N5G0 67 aa3.85□□□□□ -1.79
CHFR-211ENST00000535897 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
CHFR-211ENST00000535897 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
CHFR-211ENST00000535897 ZCCHC13Q8WW36 166 aaKnown RBP3.84□□□□□ -1.79
CHFR-211ENST00000535897 A0A1B0GW54 56 aa3.83□□□□□ -1.8
CHFR-211ENST00000535897 Q6ZQT0 140 aa3.83□□□□□ -1.8
CHFR-211ENST00000535897 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
CHFR-211ENST00000535897 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
CHFR-211ENST00000535897 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
CHFR-211ENST00000535897 C8orf87E5RJ46 101 aa3.82□□□□□ -1.8
CHFR-211ENST00000535897 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
CHFR-211ENST00000535897 COX7CP15954 63 aa3.8□□□□□ -1.8
CHFR-211ENST00000535897 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
CHFR-211ENST00000535897 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
CHFR-211ENST00000535897 NREPQ16612 68 aa3.79□□□□□ -1.8
CHFR-211ENST00000535897 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
CHFR-211ENST00000535897 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
CHFR-211ENST00000535897 J3KT08 172 aa3.78□□□□□ -1.8
CHFR-211ENST00000535897 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
CHFR-211ENST00000535897 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
CHFR-211ENST00000535897 TMEM258P61165 79 aa3.77□□□□□ -1.81
CHFR-211ENST00000535897 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
CHFR-211ENST00000535897 NDUFC1O43677 76 aa3.76□□□□□ -1.81
CHFR-211ENST00000535897 NDUFB1O75438 58 aa3.76□□□□□ -1.81
CHFR-211ENST00000535897 CXCL6P80162 114 aa3.76□□□□□ -1.81
CHFR-211ENST00000535897 A6NN06 94 aa3.74□□□□□ -1.81
CHFR-211ENST00000535897 CCDC179H3BU77 68 aa3.74□□□□□ -1.81
CHFR-211ENST00000535897 BPY2O14599 106 aa3.74□□□□□ -1.81
CHFR-211ENST00000535897 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
CHFR-211ENST00000535897 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
CHFR-211ENST00000535897 IGKV3D-7A0A0C4DH55 119 aa3.72□□□□□ -1.81
CHFR-211ENST00000535897 Q6ZVQ6 151 aa3.72□□□□□ -1.81
CHFR-211ENST00000535897 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
CHFR-211ENST00000535897 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
CHFR-211ENST00000535897 KLKP1Q107X0 134 aa3.68□□□□□ -1.82
CHFR-211ENST00000535897 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
CHFR-211ENST00000535897 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
CHFR-211ENST00000535897 NDUFS5O43920 106 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms