RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IGLV8-61A0A075B6I0 122 aa6.88□□□□□ -1.31
CHD4-203ENST00000535717 TMEM256-PLSCR3K7ERE1 68 aa6.88□□□□□ -1.31
CHD4-203ENST00000535717 RPS29P62273 56 aaKnown RBP6.88□□□□□ -1.31
CHD4-203ENST00000535717 PRR4Q16378 134 aa6.88□□□□□ -1.31
CHD4-203ENST00000535717 HRCT1Q6UXD1 115 aa6.88□□□□□ -1.31
CHD4-203ENST00000535717 DSCR8Q96T75 97 aa6.88□□□□□ -1.31
CHD4-203ENST00000535717 TRAV7A0A075B6U4 112 aa6.87□□□□□ -1.31
CHD4-203ENST00000535717 NDUFC1O43677 76 aa6.87□□□□□ -1.31
CHD4-203ENST00000535717 CD164Q04900 197 aa6.86□□□□□ -1.31
CHD4-203ENST00000535717 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
CHD4-203ENST00000535717 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
CHD4-203ENST00000535717 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
CHD4-203ENST00000535717 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
CHD4-203ENST00000535717 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
CHD4-203ENST00000535717 LRP2P98164 4655 aa6.84□□□□□ -1.31
CHD4-203ENST00000535717 H7BZZ5 65 aa6.83□□□□□ -1.32
CHD4-203ENST00000535717 LPAP08519 4548 aa6.83□□□□□ -1.32
CHD4-203ENST00000535717 A0A087WVE0 104 aa6.82□□□□□ -1.32
CHD4-203ENST00000535717 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
CHD4-203ENST00000535717 LIMD2Q9BT23 127 aa6.81□□□□□ -1.32
CHD4-203ENST00000535717 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
CHD4-203ENST00000535717 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
CHD4-203ENST00000535717 PDE6GP18545 87 aa6.8□□□□□ -1.32
CHD4-203ENST00000535717 CXCL6P80162 114 aa6.8□□□□□ -1.32
CHD4-203ENST00000535717 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
CHD4-203ENST00000535717 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
CHD4-203ENST00000535717 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
CHD4-203ENST00000535717 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
CHD4-203ENST00000535717 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
CHD4-203ENST00000535717 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
CHD4-203ENST00000535717 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
CHD4-203ENST00000535717 Q6ZQT0 140 aa6.74□□□□□ -1.33
CHD4-203ENST00000535717 TRBV7-4A0A0J9YYF1 115 aa6.72□□□□□ -1.33
CHD4-203ENST00000535717 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
CHD4-203ENST00000535717 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
CHD4-203ENST00000535717 A0A087WSZ3 146 aa6.69□□□□□ -1.34
CHD4-203ENST00000535717 Q6ZVQ6 151 aa6.68□□□□□ -1.34
CHD4-203ENST00000535717 V9GYY9 64 aa6.66□□□□□ -1.34
CHD4-203ENST00000535717 RNF213Q63HN8 5207 aa6.64□□□□□ -1.35
CHD4-203ENST00000535717 C9orf92A6NGG3 77 aa6.63□□□□□ -1.35
CHD4-203ENST00000535717 Q96NJ1 140 aa6.63□□□□□ -1.35
CHD4-203ENST00000535717 A0A0U1RQV1 116 aa6.62□□□□□ -1.35
CHD4-203ENST00000535717 A0A1B0GW54 56 aa6.62□□□□□ -1.35
CHD4-203ENST00000535717 NREPQ16612 68 aa6.62□□□□□ -1.35
CHD4-203ENST00000535717 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
CHD4-203ENST00000535717 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
CHD4-203ENST00000535717 XP32Q5T750 250 aa6.61□□□□□ -1.35
CHD4-203ENST00000535717 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
CHD4-203ENST00000535717 SEC61GP60059 68 aa6.59□□□□□ -1.35
CHD4-203ENST00000535717 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
CHD4-203ENST00000535717 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
CHD4-203ENST00000535717 DEFB116Q30KQ4 102 aa6.57□□□□□ -1.36
CHD4-203ENST00000535717 SNURFQ9Y675 71 aa6.57□□□□□ -1.36
CHD4-203ENST00000535717 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
CHD4-203ENST00000535717 IGKV4-1P06312 121 aa6.56□□□□□ -1.36
CHD4-203ENST00000535717 Q1T7F1 81 aa6.56□□□□□ -1.36
CHD4-203ENST00000535717 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
CHD4-203ENST00000535717 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
CHD4-203ENST00000535717 BPY2O14599 106 aa6.55□□□□□ -1.36
CHD4-203ENST00000535717 MUC2Q02817 5179 aa6.54□□□□□ -1.36
CHD4-203ENST00000535717 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
CHD4-203ENST00000535717 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
CHD4-203ENST00000535717 CYP4F30PQ9H0H9 118 aa6.52□□□□□ -1.37
CHD4-203ENST00000535717 DSCR10P59022 87 aa6.5□□□□□ -1.37
CHD4-203ENST00000535717 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
CHD4-203ENST00000535717 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
CHD4-203ENST00000535717 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
CHD4-203ENST00000535717 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
CHD4-203ENST00000535717 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
CHD4-203ENST00000535717 NOTCH2NLQ7Z3S9 236 aa6.47□□□□□ -1.37
CHD4-203ENST00000535717 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
CHD4-203ENST00000535717 LINC00313P59037 77 aa6.46□□□□□ -1.38
CHD4-203ENST00000535717 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
CHD4-203ENST00000535717 Q75L30 129 aa6.45□□□□□ -1.38
CHD4-203ENST00000535717 KRTAP16-1A8MUX0 517 aa6.44□□□□□ -1.38
CHD4-203ENST00000535717 A8MUU9 505 aa6.43□□□□□ -1.38
CHD4-203ENST00000535717 A8MWP4 228 aa6.43□□□□□ -1.38
CHD4-203ENST00000535717 NDUFB1O75438 58 aa6.43□□□□□ -1.38
CHD4-203ENST00000535717 C20orf166-AS1Q96NR2 134 aa6.43□□□□□ -1.38
CHD4-203ENST00000535717 C8orf87E5RJ46 101 aa6.42□□□□□ -1.38
CHD4-203ENST00000535717 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
CHD4-203ENST00000535717 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
CHD4-203ENST00000535717 H3BPC8 53 aa6.38□□□□□ -1.39
CHD4-203ENST00000535717 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
CHD4-203ENST00000535717 C1orf64Q8NEQ6 169 aa6.38□□□□□ -1.39
CHD4-203ENST00000535717 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
CHD4-203ENST00000535717 K7EQZ3 153 aa6.37□□□□□ -1.39
CHD4-203ENST00000535717 Q8N9L7 120 aa6.36□□□□□ -1.39
CHD4-203ENST00000535717 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
CHD4-203ENST00000535717 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
CHD4-203ENST00000535717 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
CHD4-203ENST00000535717 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
CHD4-203ENST00000535717 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
CHD4-203ENST00000535717 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
CHD4-203ENST00000535717 NDUFS5O43920 106 aa6.3□□□□□ -1.4
CHD4-203ENST00000535717 Q5VV11 94 aa6.29□□□□□ -1.4
CHD4-203ENST00000535717 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
CHD4-203ENST00000535717 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
CHD4-203ENST00000535717 MP68P56378 58 aa6.27□□□□□ -1.41
CHD4-203ENST00000535717 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms