RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
CLSTN3-206ENST00000535668 hADV29S1A0JD25 119 aa5.84□□□□□ -1.47
CLSTN3-206ENST00000535668 Q6JHZ5 121 aa5.84□□□□□ -1.47
CLSTN3-206ENST00000535668 COX6B2Q6YFQ2 88 aa5.84□□□□□ -1.47
CLSTN3-206ENST00000535668 A0A1B0GW54 56 aa5.81□□□□□ -1.48
CLSTN3-206ENST00000535668 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
CLSTN3-206ENST00000535668 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
CLSTN3-206ENST00000535668 A0A0G2JQZ4 141 aa5.8□□□□□ -1.48
CLSTN3-206ENST00000535668 TRBV7-7A0A0K0K1E9 115 aa5.8□□□□□ -1.48
CLSTN3-206ENST00000535668 USH2AO75445 5202 aa5.79□□□□□ -1.48
CLSTN3-206ENST00000535668 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
CLSTN3-206ENST00000535668 A0A1B0GV72 72 aa5.79□□□□□ -1.48
CLSTN3-206ENST00000535668 CCKP06307 115 aa5.79□□□□□ -1.48
CLSTN3-206ENST00000535668 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
CLSTN3-206ENST00000535668 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.78□□□□□ -1.48
CLSTN3-206ENST00000535668 RBM3P98179 157 aaKnown RBP5.78□□□□□ -1.48
CLSTN3-206ENST00000535668 ATP11AUNQ6ZP68 121 aa5.78□□□□□ -1.48
CLSTN3-206ENST00000535668 F8WEM9 126 aa5.77□□□□□ -1.49
CLSTN3-206ENST00000535668 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
CLSTN3-206ENST00000535668 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
CLSTN3-206ENST00000535668 MT-ATP8P03928 68 aa5.76□□□□□ -1.49
CLSTN3-206ENST00000535668 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
CLSTN3-206ENST00000535668 DSCR8Q96T75 97 aa5.76□□□□□ -1.49
CLSTN3-206ENST00000535668 A8MUU9 505 aa5.75□□□□□ -1.49
CLSTN3-206ENST00000535668 Q6ZQY7 126 aa5.74□□□□□ -1.49
CLSTN3-206ENST00000535668 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
CLSTN3-206ENST00000535668 C14orf132Q9NPU4 83 aa5.72□□□□□ -1.49
CLSTN3-206ENST00000535668 Q6ZQT0 140 aa5.71□□□□□ -1.5
CLSTN3-206ENST00000535668 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
CLSTN3-206ENST00000535668 NDUFV3P56181 108 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-206ENST00000535668 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
CLSTN3-206ENST00000535668 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-206ENST00000535668 MPLKIPQ8TAP9 179 aa5.68□□□□□ -1.5
CLSTN3-206ENST00000535668 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
CLSTN3-206ENST00000535668 CXCL6P80162 114 aa5.67□□□□□ -1.5
CLSTN3-206ENST00000535668 LINC00846Q9NV44 126 aa5.67□□□□□ -1.5
CLSTN3-206ENST00000535668 ATOX1O00244 68 aa5.66□□□□□ -1.5
CLSTN3-206ENST00000535668 Q96NJ1 140 aa5.66□□□□□ -1.5
CLSTN3-206ENST00000535668 MT2AP02795 61 aa5.65□□□□□ -1.5
CLSTN3-206ENST00000535668 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-206ENST00000535668 SMIM20Q8N5G0 67 aa5.64□□□□□ -1.51
CLSTN3-206ENST00000535668 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
CLSTN3-206ENST00000535668 LCE2BO14633 110 aa5.62□□□□□ -1.51
CLSTN3-206ENST00000535668 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
CLSTN3-206ENST00000535668 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
CLSTN3-206ENST00000535668 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
CLSTN3-206ENST00000535668 UQCRQO14949 82 aa5.6□□□□□ -1.51
CLSTN3-206ENST00000535668 MT1FP04733 61 aa5.59□□□□□ -1.51
CLSTN3-206ENST00000535668 Q6ZVQ6 151 aa5.59□□□□□ -1.51
CLSTN3-206ENST00000535668 HRES1P13985 223 aa5.58□□□□□ -1.52
CLSTN3-206ENST00000535668 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
CLSTN3-206ENST00000535668 A0A087WSZ3 146 aa5.57□□□□□ -1.52
CLSTN3-206ENST00000535668 NREPQ16612 68 aa5.57□□□□□ -1.52
CLSTN3-206ENST00000535668 COX7CP15954 63 aa5.56□□□□□ -1.52
CLSTN3-206ENST00000535668 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
CLSTN3-206ENST00000535668 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
CLSTN3-206ENST00000535668 LINC00313P59037 77 aa5.55□□□□□ -1.52
CLSTN3-206ENST00000535668 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
CLSTN3-206ENST00000535668 A0A1W2PNM2 257 aa5.54□□□□□ -1.52
CLSTN3-206ENST00000535668 LINC00472Q9H8W2 130 aa5.53□□□□□ -1.52
CLSTN3-206ENST00000535668 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
CLSTN3-206ENST00000535668 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-206ENST00000535668 BPY2O14599 106 aa5.52□□□□□ -1.53
CLSTN3-206ENST00000535668 DSCR10P59022 87 aa5.52□□□□□ -1.53
CLSTN3-206ENST00000535668 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
CLSTN3-206ENST00000535668 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
CLSTN3-206ENST00000535668 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
CLSTN3-206ENST00000535668 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
CLSTN3-206ENST00000535668 J3KT08 172 aa5.48□□□□□ -1.53
CLSTN3-206ENST00000535668 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
CLSTN3-206ENST00000535668 NDUFC1O43677 76 aa5.47□□□□□ -1.53
CLSTN3-206ENST00000535668 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
CLSTN3-206ENST00000535668 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
CLSTN3-206ENST00000535668 CCDC179H3BU77 68 aa5.46□□□□□ -1.54
CLSTN3-206ENST00000535668 A0A087WVE0 104 aa5.45□□□□□ -1.54
CLSTN3-206ENST00000535668 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
CLSTN3-206ENST00000535668 TMEM258P61165 79 aa5.44□□□□□ -1.54
CLSTN3-206ENST00000535668 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
CLSTN3-206ENST00000535668 A8MWP4 228 aa5.41□□□□□ -1.54
CLSTN3-206ENST00000535668 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
CLSTN3-206ENST00000535668 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
CLSTN3-206ENST00000535668 A0A1B0GVX0 72 aa5.4□□□□□ -1.54
CLSTN3-206ENST00000535668 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
CLSTN3-206ENST00000535668 ZCCHC13Q8WW36 166 aaKnown RBP5.4□□□□□ -1.54
CLSTN3-206ENST00000535668 NDUFB1O75438 58 aa5.39□□□□□ -1.55
CLSTN3-206ENST00000535668 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
CLSTN3-206ENST00000535668 SPINK7P58062 85 aa5.39□□□□□ -1.55
CLSTN3-206ENST00000535668 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
CLSTN3-206ENST00000535668 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
CLSTN3-206ENST00000535668 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
CLSTN3-206ENST00000535668 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
CLSTN3-206ENST00000535668 H3BPC8 53 aa5.36□□□□□ -1.55
CLSTN3-206ENST00000535668 DEFB116Q30KQ4 102 aa5.35□□□□□ -1.55
CLSTN3-206ENST00000535668 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
CLSTN3-206ENST00000535668 C20orf197Q8N268 126 aa5.34□□□□□ -1.55
CLSTN3-206ENST00000535668 TMEM254Q8TBM7 123 aa5.33□□□□□ -1.56
CLSTN3-206ENST00000535668 TP53AIP1Q9HCN2 124 aa5.32□□□□□ -1.56
CLSTN3-206ENST00000535668 K7EQZ3 153 aa5.31□□□□□ -1.56
CLSTN3-206ENST00000535668 MP68P56378 58 aa5.3□□□□□ -1.56
CLSTN3-206ENST00000535668 H7BZZ5 65 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms