RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 H3BS24 57 aa4.51□□□□□ -1.69
NPIPB3-207ENST00000535190 SPINK1P00995 79 aa4.51□□□□□ -1.69
NPIPB3-207ENST00000535190 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
NPIPB3-207ENST00000535190 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
NPIPB3-207ENST00000535190 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
NPIPB3-207ENST00000535190 UBL5Q9BZL1 73 aa4.5□□□□□ -1.69
NPIPB3-207ENST00000535190 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
NPIPB3-207ENST00000535190 A0A0U1RQV1 116 aa4.49□□□□□ -1.69
NPIPB3-207ENST00000535190 FAM240AA0A1B0GVK7 77 aa4.49□□□□□ -1.69
NPIPB3-207ENST00000535190 NREPQ16612 68 aa4.49□□□□□ -1.69
NPIPB3-207ENST00000535190 FP248Q71RG6 208 aaPredicted RBP4.49□□□□□ -1.69
NPIPB3-207ENST00000535190 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-207ENST00000535190 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
NPIPB3-207ENST00000535190 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
NPIPB3-207ENST00000535190 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
NPIPB3-207ENST00000535190 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
NPIPB3-207ENST00000535190 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
NPIPB3-207ENST00000535190 J3KT08 172 aa4.44□□□□□ -1.7
NPIPB3-207ENST00000535190 BPY2O14599 106 aa4.44□□□□□ -1.7
NPIPB3-207ENST00000535190 Q5XG85 94 aa4.44□□□□□ -1.7
NPIPB3-207ENST00000535190 Q6ZVQ6 151 aa4.44□□□□□ -1.7
NPIPB3-207ENST00000535190 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
NPIPB3-207ENST00000535190 NDUFB1O75438 58 aa4.42□□□□□ -1.7
NPIPB3-207ENST00000535190 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
NPIPB3-207ENST00000535190 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
NPIPB3-207ENST00000535190 LINC00643Q86TS7 51 aa4.41□□□□□ -1.7
NPIPB3-207ENST00000535190 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.71
NPIPB3-207ENST00000535190 CXCL6P80162 114 aa4.39□□□□□ -1.71
NPIPB3-207ENST00000535190 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
NPIPB3-207ENST00000535190 C1orf195Q5TG92 126 aa4.39□□□□□ -1.71
NPIPB3-207ENST00000535190 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
NPIPB3-207ENST00000535190 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
NPIPB3-207ENST00000535190 IGKV3D-7A0A0C4DH55 119 aa4.37□□□□□ -1.71
NPIPB3-207ENST00000535190 A8MWP4 228 aa4.37□□□□□ -1.71
NPIPB3-207ENST00000535190 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
NPIPB3-207ENST00000535190 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
NPIPB3-207ENST00000535190 Q96NJ1 140 aa4.36□□□□□ -1.71
NPIPB3-207ENST00000535190 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
NPIPB3-207ENST00000535190 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
NPIPB3-207ENST00000535190 K7EQZ3 153 aa4.34□□□□□ -1.71
NPIPB3-207ENST00000535190 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
NPIPB3-207ENST00000535190 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
NPIPB3-207ENST00000535190 DSCR10P59022 87 aa4.33□□□□□ -1.72
NPIPB3-207ENST00000535190 LINC00313P59037 77 aa4.33□□□□□ -1.72
NPIPB3-207ENST00000535190 Q8N9L7 120 aa4.32□□□□□ -1.72
NPIPB3-207ENST00000535190 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
NPIPB3-207ENST00000535190 PCOTHQ58A44 107 aa4.31□□□□□ -1.72
NPIPB3-207ENST00000535190 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
NPIPB3-207ENST00000535190 C9orf92A6NGG3 77 aa4.3□□□□□ -1.72
NPIPB3-207ENST00000535190 HCG22E2RYF7 251 aa4.3□□□□□ -1.72
NPIPB3-207ENST00000535190 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
NPIPB3-207ENST00000535190 C8orf17Q9NRJ1 99 aa4.3□□□□□ -1.72
NPIPB3-207ENST00000535190 hDV103S1A0JD37 113 aa4.29□□□□□ -1.72
NPIPB3-207ENST00000535190 MT1HP80294 61 aa4.29□□□□□ -1.72
NPIPB3-207ENST00000535190 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
NPIPB3-207ENST00000535190 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
NPIPB3-207ENST00000535190 SCGB1A1P11684 91 aa4.28□□□□□ -1.72
NPIPB3-207ENST00000535190 A0A087WVE0 104 aa4.27□□□□□ -1.73
NPIPB3-207ENST00000535190 MMP24-AS1A0A0U1RRL7 71 aa4.27□□□□□ -1.73
NPIPB3-207ENST00000535190 NDUFS5O43920 106 aa4.27□□□□□ -1.73
NPIPB3-207ENST00000535190 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
NPIPB3-207ENST00000535190 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
NPIPB3-207ENST00000535190 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
NPIPB3-207ENST00000535190 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
NPIPB3-207ENST00000535190 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-207ENST00000535190 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
NPIPB3-207ENST00000535190 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
NPIPB3-207ENST00000535190 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
NPIPB3-207ENST00000535190 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
NPIPB3-207ENST00000535190 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
NPIPB3-207ENST00000535190 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
NPIPB3-207ENST00000535190 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
NPIPB3-207ENST00000535190 ATOX1O00244 68 aa4.21□□□□□ -1.74
NPIPB3-207ENST00000535190 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
NPIPB3-207ENST00000535190 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.74
NPIPB3-207ENST00000535190 SMIM20Q8N5G0 67 aa4.21□□□□□ -1.74
NPIPB3-207ENST00000535190 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
NPIPB3-207ENST00000535190 Q75L30 129 aa4.2□□□□□ -1.74
NPIPB3-207ENST00000535190 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
NPIPB3-207ENST00000535190 C20orf166-AS1Q96NR2 134 aa4.2□□□□□ -1.74
NPIPB3-207ENST00000535190 A8MUU9 505 aa4.18□□□□□ -1.74
NPIPB3-207ENST00000535190 UQCRQO14949 82 aa4.18□□□□□ -1.74
NPIPB3-207ENST00000535190 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
NPIPB3-207ENST00000535190 MP68P56378 58 aa4.16□□□□□ -1.74
NPIPB3-207ENST00000535190 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
NPIPB3-207ENST00000535190 TRAV22A0A0B4J277 110 aa4.15□□□□□ -1.75
NPIPB3-207ENST00000535190 TRAV7A0A075B6U4 112 aa4.14□□□□□ -1.75
NPIPB3-207ENST00000535190 C5orf47Q569G3 176 aa4.14□□□□□ -1.75
NPIPB3-207ENST00000535190 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
NPIPB3-207ENST00000535190 H0Y9P7 68 aa4.13□□□□□ -1.75
NPIPB3-207ENST00000535190 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
NPIPB3-207ENST00000535190 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
NPIPB3-207ENST00000535190 SERP2Q8N6R1 65 aa4.12□□□□□ -1.75
NPIPB3-207ENST00000535190 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
NPIPB3-207ENST00000535190 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
NPIPB3-207ENST00000535190 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
NPIPB3-207ENST00000535190 H3BPC8 53 aa4.1□□□□□ -1.75
NPIPB3-207ENST00000535190 M0R2T5 61 aa4.1□□□□□ -1.75
NPIPB3-207ENST00000535190 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
NPIPB3-207ENST00000535190 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms