RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
CMTM1-220ENST00000534143 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
CMTM1-220ENST00000534143 NDUFB1O75438 58 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 UBE2BP63146 152 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 CD164Q04900 197 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 C6orf99Q4VX62 202 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 DIRC1Q969H9 104 aa3.78□□□□□ -1.8
CMTM1-220ENST00000534143 A0A1B0GW54 56 aa3.77□□□□□ -1.81
CMTM1-220ENST00000534143 COX7BP24311 80 aa3.77□□□□□ -1.81
CMTM1-220ENST00000534143 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
CMTM1-220ENST00000534143 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
CMTM1-220ENST00000534143 ELOF1P60002 83 aaKnown RBP3.76□□□□□ -1.81
CMTM1-220ENST00000534143 PSORS1C2Q9UIG4 136 aa3.76□□□□□ -1.81
CMTM1-220ENST00000534143 CDK2AP2O75956 126 aa3.75□□□□□ -1.81
CMTM1-220ENST00000534143 UBE2AP49459 152 aa3.75□□□□□ -1.81
CMTM1-220ENST00000534143 Q1T7F1 81 aa3.75□□□□□ -1.81
CMTM1-220ENST00000534143 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
CMTM1-220ENST00000534143 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 HERC1Q15751 4861 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 H0Y9J4 135 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 NDUFS5O43920 106 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 Q6ZQY7 126 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 Q6ZRX8 168 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 Q9BRP9 147 aa3.74□□□□□ -1.81
CMTM1-220ENST00000534143 SMR3BP02814 79 aaPredicted RBP3.73□□□□□ -1.81
CMTM1-220ENST00000534143 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
CMTM1-220ENST00000534143 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
CMTM1-220ENST00000534143 PRLHP81277 87 aa3.73□□□□□ -1.81
CMTM1-220ENST00000534143 C1orf137Q5JT78 98 aa3.73□□□□□ -1.81
CMTM1-220ENST00000534143 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
CMTM1-220ENST00000534143 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
CMTM1-220ENST00000534143 MP68P56378 58 aa3.72□□□□□ -1.81
CMTM1-220ENST00000534143 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
CMTM1-220ENST00000534143 ZNF861PO60384 105 aa3.71□□□□□ -1.82
CMTM1-220ENST00000534143 PRR26Q8N8Z3 221 aa3.71□□□□□ -1.82
CMTM1-220ENST00000534143 LIMD2Q9BT23 127 aa3.71□□□□□ -1.82
CMTM1-220ENST00000534143 DHRS4-AS1Q9P1J3 65 aa3.71□□□□□ -1.82
CMTM1-220ENST00000534143 IGKV4-1P06312 121 aa3.7□□□□□ -1.82
CMTM1-220ENST00000534143 RPL37AP61513 92 aaKnown RBP3.7□□□□□ -1.82
CMTM1-220ENST00000534143 HIGD2AQ9BW72 106 aa3.7□□□□□ -1.82
CMTM1-220ENST00000534143 OCR1Q9BZK8 76 aa3.7□□□□□ -1.82
CMTM1-220ENST00000534143 CYP4F30PQ9H0H9 118 aa3.7□□□□□ -1.82
CMTM1-220ENST00000534143 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
CMTM1-220ENST00000534143 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
CMTM1-220ENST00000534143 ST20-AS1Q8NBB2 130 aa3.69□□□□□ -1.82
CMTM1-220ENST00000534143 IGLV5-48A0A075B6I7 105 aa3.68□□□□□ -1.82
CMTM1-220ENST00000534143 H3BPC8 53 aa3.68□□□□□ -1.82
CMTM1-220ENST00000534143 SPRR1BP22528 89 aa3.68□□□□□ -1.82
CMTM1-220ENST00000534143 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
CMTM1-220ENST00000534143 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
CMTM1-220ENST00000534143 Q8N377 158 aa3.68□□□□□ -1.82
CMTM1-220ENST00000534143 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
CMTM1-220ENST00000534143 SPINK6Q6UWN8 80 aa3.67□□□□□ -1.82
CMTM1-220ENST00000534143 C1orf64Q8NEQ6 169 aa3.67□□□□□ -1.82
CMTM1-220ENST00000534143 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
CMTM1-220ENST00000534143 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 PSPHP1O15172 72 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 LINC00483Q53H64 154 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 Q5VSD8 79 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 ATP11AUNQ6ZP68 121 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 SMIM29Q86T20 159 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
CMTM1-220ENST00000534143 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.82
CMTM1-220ENST00000534143 HCG22E2RYF7 251 aa3.65□□□□□ -1.83
CMTM1-220ENST00000534143 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.83
CMTM1-220ENST00000534143 ZNF706Q9Y5V0 76 aaPredicted RBP3.65□□□□□ -1.83
CMTM1-220ENST00000534143 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.83
CMTM1-220ENST00000534143 LRP1Q07954 4544 aaKnown RBP3.64□□□□□ -1.83
CMTM1-220ENST00000534143 SPANXA2-OT1Q8N9U9 137 aa3.64□□□□□ -1.83
CMTM1-220ENST00000534143 LINC00208Q96KT6 92 aa3.64□□□□□ -1.83
CMTM1-220ENST00000534143 A6NED7 52 aa3.63□□□□□ -1.83
CMTM1-220ENST00000534143 MT3P25713 68 aa3.63□□□□□ -1.83
CMTM1-220ENST00000534143 SPTSSBQ8NFR3 76 aa3.63□□□□□ -1.83
CMTM1-220ENST00000534143 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
CMTM1-220ENST00000534143 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
CMTM1-220ENST00000534143 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
CMTM1-220ENST00000534143 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
CMTM1-220ENST00000534143 Q8N9L7 120 aa3.62□□□□□ -1.83
CMTM1-220ENST00000534143 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
CMTM1-220ENST00000534143 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
CMTM1-220ENST00000534143 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
CMTM1-220ENST00000534143 A8MUN3 132 aa3.61□□□□□ -1.83
CMTM1-220ENST00000534143 ZCCHC13Q8WW36 166 aaKnown RBP3.61□□□□□ -1.83
CMTM1-220ENST00000534143 A0A087X002 238 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 C7orf65Q6ZTY9 151 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 Q75L30 129 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 Q8NBF4 154 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 RBM12B-AS1Q9P1G2 102 aa3.6□□□□□ -1.83
CMTM1-220ENST00000534143 LCA10Q71F78 164 aa3.59□□□□□ -1.83
CMTM1-220ENST00000534143 SSBP3-AS1Q7Z2R9 100 aa3.59□□□□□ -1.83
CMTM1-220ENST00000534143 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
CMTM1-220ENST00000534143 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
CMTM1-220ENST00000534143 H0Y9P7 68 aa3.58□□□□□ -1.84
CMTM1-220ENST00000534143 MOBPQ13875 183 aa3.58□□□□□ -1.84
CMTM1-220ENST00000534143 Q5VV11 94 aa3.58□□□□□ -1.84
CMTM1-220ENST00000534143 IGFL1Q6UW32 110 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms