RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 LIMD2Q9BT23 127 aa5.88□□□□□ -1.47
RTL1-201ENST00000534062 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
RTL1-201ENST00000534062 A0A1B0GW54 56 aa5.87□□□□□ -1.47
RTL1-201ENST00000534062 A6NED7 52 aa5.87□□□□□ -1.47
RTL1-201ENST00000534062 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
RTL1-201ENST00000534062 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
RTL1-201ENST00000534062 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
RTL1-201ENST00000534062 Q75L30 129 aa5.85□□□□□ -1.47
RTL1-201ENST00000534062 DNAH11Q96DT5 4516 aa5.84□□□□□ -1.47
RTL1-201ENST00000534062 K7EQZ3 153 aa5.84□□□□□ -1.47
RTL1-201ENST00000534062 LINC00208Q96KT6 92 aa5.84□□□□□ -1.47
RTL1-201ENST00000534062 DSCR10P59022 87 aa5.84□□□□□ -1.48
RTL1-201ENST00000534062 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
RTL1-201ENST00000534062 Q6ZSA8 131 aa5.83□□□□□ -1.48
RTL1-201ENST00000534062 SPRR4Q96PI1 79 aa5.83□□□□□ -1.48
RTL1-201ENST00000534062 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
RTL1-201ENST00000534062 DNAH6Q9C0G6 4158 aa5.82□□□□□ -1.48
RTL1-201ENST00000534062 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
RTL1-201ENST00000534062 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
RTL1-201ENST00000534062 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
RTL1-201ENST00000534062 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
RTL1-201ENST00000534062 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
RTL1-201ENST00000534062 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
RTL1-201ENST00000534062 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
RTL1-201ENST00000534062 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
RTL1-201ENST00000534062 RYR2Q92736 4967 aa5.79□□□□□ -1.48
RTL1-201ENST00000534062 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
RTL1-201ENST00000534062 DNAH5Q8TE73 4624 aa5.78□□□□□ -1.48
RTL1-201ENST00000534062 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
RTL1-201ENST00000534062 H0Y9P7 68 aa5.77□□□□□ -1.49
RTL1-201ENST00000534062 LINC00313P59037 77 aa5.77□□□□□ -1.49
RTL1-201ENST00000534062 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
RTL1-201ENST00000534062 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
RTL1-201ENST00000534062 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
RTL1-201ENST00000534062 SPANXA2-OT1Q8N9U9 137 aa5.76□□□□□ -1.49
RTL1-201ENST00000534062 SPINK7P58062 85 aa5.75□□□□□ -1.49
RTL1-201ENST00000534062 A8MWP4 228 aa5.75□□□□□ -1.49
RTL1-201ENST00000534062 COA5Q86WW8 74 aa5.74□□□□□ -1.49
RTL1-201ENST00000534062 PRR26Q8N8Z3 221 aa5.74□□□□□ -1.49
RTL1-201ENST00000534062 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
RTL1-201ENST00000534062 PKD1P98161 4303 aa5.72□□□□□ -1.49
RTL1-201ENST00000534062 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
RTL1-201ENST00000534062 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
RTL1-201ENST00000534062 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.49
RTL1-201ENST00000534062 SPRR1BP22528 89 aa5.71□□□□□ -1.5
RTL1-201ENST00000534062 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
RTL1-201ENST00000534062 DNAH8Q96JB1 4490 aa5.71□□□□□ -1.5
RTL1-201ENST00000534062 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
RTL1-201ENST00000534062 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
RTL1-201ENST00000534062 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
RTL1-201ENST00000534062 RYR3Q15413 4870 aa5.7□□□□□ -1.5
RTL1-201ENST00000534062 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
RTL1-201ENST00000534062 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
RTL1-201ENST00000534062 Q96NJ1 140 aa5.68□□□□□ -1.5
RTL1-201ENST00000534062 A0A087X002 238 aa5.68□□□□□ -1.5
RTL1-201ENST00000534062 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
RTL1-201ENST00000534062 Q5VSD8 79 aa5.67□□□□□ -1.5
RTL1-201ENST00000534062 C8orf17Q9NRJ1 99 aa5.67□□□□□ -1.5
RTL1-201ENST00000534062 A0A1B0GVX0 72 aa5.67□□□□□ -1.5
RTL1-201ENST00000534062 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
RTL1-201ENST00000534062 J3QL48 77 aa5.67□□□□□ -1.5
RTL1-201ENST00000534062 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
RTL1-201ENST00000534062 IGLV8-61A0A075B6I0 122 aa5.65□□□□□ -1.51
RTL1-201ENST00000534062 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
RTL1-201ENST00000534062 SPINK1P00995 79 aa5.64□□□□□ -1.51
RTL1-201ENST00000534062 FAT1Q14517 4588 aa5.64□□□□□ -1.51
RTL1-201ENST00000534062 H3BPC8 53 aa5.63□□□□□ -1.51
RTL1-201ENST00000534062 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
RTL1-201ENST00000534062 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
RTL1-201ENST00000534062 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
RTL1-201ENST00000534062 VPS13BQ7Z7G8 4022 aa5.61□□□□□ -1.51
RTL1-201ENST00000534062 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
RTL1-201ENST00000534062 HRES1P13985 223 aa5.58□□□□□ -1.52
RTL1-201ENST00000534062 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
RTL1-201ENST00000534062 KIAA1109Q2LD37 5005 aa5.57□□□□□ -1.52
RTL1-201ENST00000534062 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
RTL1-201ENST00000534062 Q8N1X5 172 aa5.54□□□□□ -1.52
RTL1-201ENST00000534062 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
RTL1-201ENST00000534062 LINC00472Q9H8W2 130 aa5.53□□□□□ -1.52
RTL1-201ENST00000534062 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
RTL1-201ENST00000534062 ACYP2P14621 99 aa5.5□□□□□ -1.53
RTL1-201ENST00000534062 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
RTL1-201ENST00000534062 ASB16-AS1Q495Z4 193 aa5.48□□□□□ -1.53
RTL1-201ENST00000534062 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
RTL1-201ENST00000534062 RYR1P21817 5038 aa5.47□□□□□ -1.53
RTL1-201ENST00000534062 HSPG2P98160 4391 aa5.47□□□□□ -1.53
RTL1-201ENST00000534062 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
RTL1-201ENST00000534062 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
RTL1-201ENST00000534062 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
RTL1-201ENST00000534062 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
RTL1-201ENST00000534062 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
RTL1-201ENST00000534062 A0A1B0GU69 56 aa5.37□□□□□ -1.55
RTL1-201ENST00000534062 K7ERS5 55 aa5.37□□□□□ -1.55
RTL1-201ENST00000534062 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
RTL1-201ENST00000534062 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
RTL1-201ENST00000534062 COX6B2Q6YFQ2 88 aa5.37□□□□□ -1.55
RTL1-201ENST00000534062 ROMO1P60602 79 aa5.35□□□□□ -1.55
RTL1-201ENST00000534062 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
RTL1-201ENST00000534062 UQCR11O14957 56 aa5.33□□□□□ -1.56
RTL1-201ENST00000534062 Q5W150 140 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms