RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 H3BPC8 53 aa11.61□□□□□ -0.55
CAPN1-226ENST00000533820 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
CAPN1-226ENST00000533820 A0A087X002 238 aa11.61□□□□□ -0.55
CAPN1-226ENST00000533820 NOTCH2NLQ7Z3S9 236 aa11.61□□□□□ -0.55
CAPN1-226ENST00000533820 C8orf17Q9NRJ1 99 aa11.6□□□□□ -0.55
CAPN1-226ENST00000533820 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
CAPN1-226ENST00000533820 A0A087WTM6 91 aa11.57□□□□□ -0.56
CAPN1-226ENST00000533820 FRAS1Q86XX4 4008 aa11.57□□□□□ -0.56
CAPN1-226ENST00000533820 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
CAPN1-226ENST00000533820 WWC2-AS2Q96NR7 200 aa11.56□□□□□ -0.56
CAPN1-226ENST00000533820 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
CAPN1-226ENST00000533820 NUPR2A6NF83 97 aa11.55□□□□□ -0.56
CAPN1-226ENST00000533820 RTL8CO15255 209 aa11.55□□□□□ -0.56
CAPN1-226ENST00000533820 MEGF8Q7Z7M0 2845 aa11.55□□□□□ -0.56
CAPN1-226ENST00000533820 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
CAPN1-226ENST00000533820 A0A1B0GVX0 72 aa11.53□□□□□ -0.56
CAPN1-226ENST00000533820 IGLV5-52A0A0A0MRZ9 124 aa11.51□□□□□ -0.57
CAPN1-226ENST00000533820 PLA2G1BP04054 148 aaKnown RBP11.49□□□□□ -0.57
CAPN1-226ENST00000533820 FBN3Q75N90 2809 aa11.49□□□□□ -0.57
CAPN1-226ENST00000533820 LINC00483Q53H64 154 aa11.49□□□□□ -0.57
CAPN1-226ENST00000533820 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
CAPN1-226ENST00000533820 CIRBP-AS1Q8TBR5 109 aa11.48□□□□□ -0.57
CAPN1-226ENST00000533820 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
CAPN1-226ENST00000533820 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
CAPN1-226ENST00000533820 ZNF706Q9Y5V0 76 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-226ENST00000533820 ZNF861PO60384 105 aa11.46□□□□□ -0.57
CAPN1-226ENST00000533820 MRPL34Q9BQ48 92 aaKnown RBP11.46□□□□□ -0.57
CAPN1-226ENST00000533820 HRES1P13985 223 aa11.46□□□□□ -0.57
CAPN1-226ENST00000533820 ASB16-AS1Q495Z4 193 aa11.46□□□□□ -0.58
CAPN1-226ENST00000533820 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
CAPN1-226ENST00000533820 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
CAPN1-226ENST00000533820 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
CAPN1-226ENST00000533820 HECTD4Q9Y4D8 3996 aa11.42□□□□□ -0.58
CAPN1-226ENST00000533820 Q6ZR54 194 aa11.41□□□□□ -0.58
CAPN1-226ENST00000533820 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
CAPN1-226ENST00000533820 Q5W150 140 aa11.4□□□□□ -0.58
CAPN1-226ENST00000533820 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
CAPN1-226ENST00000533820 DNAH2Q9P225 4427 aa11.35□□□□□ -0.59
CAPN1-226ENST00000533820 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
CAPN1-226ENST00000533820 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
CAPN1-226ENST00000533820 LY6G6CO95867 125 aa11.3□□□□□ -0.6
CAPN1-226ENST00000533820 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
CAPN1-226ENST00000533820 DNAH6Q9C0G6 4158 aa11.25□□□□□ -0.61
CAPN1-226ENST00000533820 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
CAPN1-226ENST00000533820 DNHD1Q96M86 4753 aa11.17□□□□□ -0.62
CAPN1-226ENST00000533820 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
CAPN1-226ENST00000533820 A0A1B0GU69 56 aa11.16□□□□□ -0.62
CAPN1-226ENST00000533820 DNAH11Q96DT5 4516 aa11.15□□□□□ -0.62
CAPN1-226ENST00000533820 MIR22HGQ0VDD5 57 aa11.15□□□□□ -0.63
CAPN1-226ENST00000533820 SPATA8Q6RVD6 105 aa11.12□□□□□ -0.63
CAPN1-226ENST00000533820 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
CAPN1-226ENST00000533820 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
CAPN1-226ENST00000533820 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
CAPN1-226ENST00000533820 ACYP2P14621 99 aa11.09□□□□□ -0.63
CAPN1-226ENST00000533820 IGKV2D-30A0A075B6S6 120 aa11.05□□□□□ -0.64
CAPN1-226ENST00000533820 IGKV2-30P06310 120 aa11.05□□□□□ -0.64
CAPN1-226ENST00000533820 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
CAPN1-226ENST00000533820 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
CAPN1-226ENST00000533820 FAM229AH3BQW9 127 aa11.03□□□□□ -0.64
CAPN1-226ENST00000533820 UQCR11O14957 56 aa11.02□□□□□ -0.65
CAPN1-226ENST00000533820 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
CAPN1-226ENST00000533820 ROMO1P60602 79 aa11.01□□□□□ -0.65
CAPN1-226ENST00000533820 DMAC1Q96GE9 116 aa10.99□□□□□ -0.65
CAPN1-226ENST00000533820 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.66
CAPN1-226ENST00000533820 KRTAP16-1A8MUX0 517 aa10.91□□□□□ -0.66
CAPN1-226ENST00000533820 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.67
CAPN1-226ENST00000533820 SPINK1P00995 79 aa10.88□□□□□ -0.67
CAPN1-226ENST00000533820 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
CAPN1-226ENST00000533820 VPS13BQ7Z7G8 4022 aa10.86□□□□□ -0.67
CAPN1-226ENST00000533820 TYMSOSQ8TAI1 123 aa10.85□□□□□ -0.67
CAPN1-226ENST00000533820 CRIPTQ9P021 101 aa10.85□□□□□ -0.67
CAPN1-226ENST00000533820 Q6ZSA8 131 aa10.83□□□□□ -0.68
CAPN1-226ENST00000533820 KRTAP25-1Q3LHN0 102 aa10.83□□□□□ -0.68
CAPN1-226ENST00000533820 Q8N1X5 172 aa10.82□□□□□ -0.68
CAPN1-226ENST00000533820 P0C880 135 aa10.81□□□□□ -0.68
CAPN1-226ENST00000533820 PKD1P98161 4303 aa10.79□□□□□ -0.68
CAPN1-226ENST00000533820 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.69
CAPN1-226ENST00000533820 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-226ENST00000533820 A8MUU9 505 aa10.71□□□□□ -0.69
CAPN1-226ENST00000533820 PKHD1P08F94 4074 aa10.7□□□□□ -0.7
CAPN1-226ENST00000533820 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
CAPN1-226ENST00000533820 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
CAPN1-226ENST00000533820 A0A0A0MQY5 61 aa10.64□□□□□ -0.71
CAPN1-226ENST00000533820 FAT1Q14517 4588 aa10.53□□□□□ -0.72
CAPN1-226ENST00000533820 H0YAA0 97 aa10.5□□□□□ -0.73
CAPN1-226ENST00000533820 NDUFAF8A1L188 74 aa10.49□□□□□ -0.73
CAPN1-226ENST00000533820 SPINT4Q6UDR6 99 aa10.47□□□□□ -0.73
CAPN1-226ENST00000533820 KRTAP3-1Q9BYR8 98 aa10.4□□□□□ -0.74
CAPN1-226ENST00000533820 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.75
CAPN1-226ENST00000533820 DMBT1Q9UGM3 2413 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-226ENST00000533820 KRTAP21-3Q3LHN1 58 aa10.36□□□□□ -0.75
CAPN1-226ENST00000533820 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
CAPN1-226ENST00000533820 RPS29P62273 56 aaKnown RBP10.33□□□□□ -0.76
CAPN1-226ENST00000533820 SACSQ9NZJ4 4579 aa10.33□□□□□ -0.76
CAPN1-226ENST00000533820 A0A1B0GU33 70 aa10.29□□□□□ -0.76
CAPN1-226ENST00000533820 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-226ENST00000533820 H1FX-AS1Q4G0G2 97 aa10.19□□□□□ -0.78
CAPN1-226ENST00000533820 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
CAPN1-226ENST00000533820 K7ERS5 55 aa10.17□□□□□ -0.78
CAPN1-226ENST00000533820 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms