RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 LAMTOR3Q9UHA4 124 aa4.88□□□□□ -1.63
PACS1-214ENST00000533811 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
PACS1-214ENST00000533811 SPRR1BP22528 89 aa4.87□□□□□ -1.63
PACS1-214ENST00000533811 RBM3P98179 157 aaKnown RBP4.87□□□□□ -1.63
PACS1-214ENST00000533811 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
PACS1-214ENST00000533811 A0A1B0GW54 56 aa4.86□□□□□ -1.63
PACS1-214ENST00000533811 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
PACS1-214ENST00000533811 DSCR8Q96T75 97 aa4.86□□□□□ -1.63
PACS1-214ENST00000533811 USH2AO75445 5202 aa4.85□□□□□ -1.63
PACS1-214ENST00000533811 F8WEM9 126 aa4.85□□□□□ -1.63
PACS1-214ENST00000533811 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
PACS1-214ENST00000533811 CD164Q04900 197 aa4.84□□□□□ -1.63
PACS1-214ENST00000533811 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
PACS1-214ENST00000533811 TRBV7-4A0A0J9YYF1 115 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 CCKP06307 115 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 Q6JHZ5 121 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 SMIM29Q86T20 159 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 C14orf132Q9NPU4 83 aa4.82□□□□□ -1.64
PACS1-214ENST00000533811 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
PACS1-214ENST00000533811 A0A0G2JQZ4 141 aa4.81□□□□□ -1.64
PACS1-214ENST00000533811 Q6ZQT0 140 aa4.81□□□□□ -1.64
PACS1-214ENST00000533811 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
PACS1-214ENST00000533811 VPS25Q9BRG1 176 aa4.8□□□□□ -1.64
PACS1-214ENST00000533811 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
PACS1-214ENST00000533811 Q5XG85 94 aa4.79□□□□□ -1.64
PACS1-214ENST00000533811 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
PACS1-214ENST00000533811 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
PACS1-214ENST00000533811 LINC00643Q86TS7 51 aa4.77□□□□□ -1.65
PACS1-214ENST00000533811 UBL5Q9BZL1 73 aa4.77□□□□□ -1.65
PACS1-214ENST00000533811 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
PACS1-214ENST00000533811 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
PACS1-214ENST00000533811 SCGB1A1P11684 91 aa4.74□□□□□ -1.65
PACS1-214ENST00000533811 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
PACS1-214ENST00000533811 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
PACS1-214ENST00000533811 TRBV7-7A0A0K0K1E9 115 aa4.73□□□□□ -1.65
PACS1-214ENST00000533811 MT2AP02795 61 aa4.73□□□□□ -1.65
PACS1-214ENST00000533811 Q75L30 129 aa4.73□□□□□ -1.65
PACS1-214ENST00000533811 SIGMAR1Q99720 223 aa4.73□□□□□ -1.65
PACS1-214ENST00000533811 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
PACS1-214ENST00000533811 A0A1B0GV72 72 aa4.72□□□□□ -1.65
PACS1-214ENST00000533811 SS18L2Q9UHA2 77 aa4.71□□□□□ -1.66
PACS1-214ENST00000533811 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
PACS1-214ENST00000533811 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
PACS1-214ENST00000533811 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
PACS1-214ENST00000533811 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
PACS1-214ENST00000533811 CXCL6P80162 114 aa4.7□□□□□ -1.66
PACS1-214ENST00000533811 MT1FP04733 61 aa4.69□□□□□ -1.66
PACS1-214ENST00000533811 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
PACS1-214ENST00000533811 NREPQ16612 68 aa4.69□□□□□ -1.66
PACS1-214ENST00000533811 Q6ZVQ6 151 aa4.69□□□□□ -1.66
PACS1-214ENST00000533811 Q96NJ1 140 aa4.69□□□□□ -1.66
PACS1-214ENST00000533811 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
PACS1-214ENST00000533811 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
PACS1-214ENST00000533811 J3KT08 172 aa4.66□□□□□ -1.66
PACS1-214ENST00000533811 A0A087WSZ3 146 aa4.65□□□□□ -1.67
PACS1-214ENST00000533811 BPY2O14599 106 aa4.65□□□□□ -1.67
PACS1-214ENST00000533811 MT-ATP8P03928 68 aa4.65□□□□□ -1.67
PACS1-214ENST00000533811 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
PACS1-214ENST00000533811 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
PACS1-214ENST00000533811 A8MUU9 505 aa4.61□□□□□ -1.67
PACS1-214ENST00000533811 IGKV3D-7A0A0C4DH55 119 aa4.6□□□□□ -1.67
PACS1-214ENST00000533811 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
PACS1-214ENST00000533811 NDUFB1O75438 58 aa4.59□□□□□ -1.67
PACS1-214ENST00000533811 HIST1H4AP62805 103 aaKnown RBP4.59□□□□□ -1.67
PACS1-214ENST00000533811 LINC00472Q9H8W2 130 aa4.59□□□□□ -1.67
PACS1-214ENST00000533811 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
PACS1-214ENST00000533811 ATOX1O00244 68 aa4.58□□□□□ -1.68
PACS1-214ENST00000533811 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PACS1-214ENST00000533811 SMIM20Q8N5G0 67 aa4.58□□□□□ -1.68
PACS1-214ENST00000533811 A8MWP4 228 aa4.57□□□□□ -1.68
PACS1-214ENST00000533811 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
PACS1-214ENST00000533811 DSCR10P59022 87 aa4.57□□□□□ -1.68
PACS1-214ENST00000533811 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
PACS1-214ENST00000533811 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
PACS1-214ENST00000533811 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
PACS1-214ENST00000533811 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
PACS1-214ENST00000533811 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
PACS1-214ENST00000533811 HRES1P13985 223 aa4.54□□□□□ -1.68
PACS1-214ENST00000533811 DEFB116Q30KQ4 102 aa4.54□□□□□ -1.68
PACS1-214ENST00000533811 HCG22E2RYF7 251 aa4.53□□□□□ -1.68
PACS1-214ENST00000533811 C8orf87E5RJ46 101 aa4.53□□□□□ -1.68
PACS1-214ENST00000533811 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
PACS1-214ENST00000533811 A0A087WVE0 104 aa4.52□□□□□ -1.69
PACS1-214ENST00000533811 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
PACS1-214ENST00000533811 K7EQZ3 153 aa4.52□□□□□ -1.69
PACS1-214ENST00000533811 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
PACS1-214ENST00000533811 LINC00313P59037 77 aa4.51□□□□□ -1.69
PACS1-214ENST00000533811 MPLKIPQ8TAP9 179 aa4.51□□□□□ -1.69
PACS1-214ENST00000533811 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
PACS1-214ENST00000533811 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
PACS1-214ENST00000533811 SERP2Q8N6R1 65 aa4.49□□□□□ -1.69
PACS1-214ENST00000533811 Q8N9L7 120 aa4.49□□□□□ -1.69
PACS1-214ENST00000533811 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
PACS1-214ENST00000533811 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
PACS1-214ENST00000533811 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
PACS1-214ENST00000533811 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
PACS1-214ENST00000533811 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
PACS1-214ENST00000533811 UQCRQO14949 82 aa4.47□□□□□ -1.69
PACS1-214ENST00000533811 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms