RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 IMUPQ9GZP8 106 aa6.78□□□□□ -1.32
CAPN1-223ENST00000533079 LINC00846Q9NV44 126 aa6.78□□□□□ -1.32
CAPN1-223ENST00000533079 Q6Q795 121 aa6.77□□□□□ -1.33
CAPN1-223ENST00000533079 F8WEM9 126 aa6.76□□□□□ -1.33
CAPN1-223ENST00000533079 MT-ATP8P03928 68 aa6.76□□□□□ -1.33
CAPN1-223ENST00000533079 Q6JHZ5 121 aa6.76□□□□□ -1.33
CAPN1-223ENST00000533079 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
CAPN1-223ENST00000533079 A0A1B0GV72 72 aa6.75□□□□□ -1.33
CAPN1-223ENST00000533079 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
CAPN1-223ENST00000533079 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
CAPN1-223ENST00000533079 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
CAPN1-223ENST00000533079 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
CAPN1-223ENST00000533079 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
CAPN1-223ENST00000533079 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
CAPN1-223ENST00000533079 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
CAPN1-223ENST00000533079 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
CAPN1-223ENST00000533079 Q6ZVQ6 151 aa6.69□□□□□ -1.34
CAPN1-223ENST00000533079 CXCL6P80162 114 aa6.68□□□□□ -1.34
CAPN1-223ENST00000533079 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
CAPN1-223ENST00000533079 NREPQ16612 68 aa6.66□□□□□ -1.34
CAPN1-223ENST00000533079 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
CAPN1-223ENST00000533079 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
CAPN1-223ENST00000533079 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
CAPN1-223ENST00000533079 CD164Q04900 197 aa6.6□□□□□ -1.35
CAPN1-223ENST00000533079 PCP4P48539 62 aa6.59□□□□□ -1.35
CAPN1-223ENST00000533079 A0A087WSZ3 146 aa6.58□□□□□ -1.36
CAPN1-223ENST00000533079 BPY2O14599 106 aa6.58□□□□□ -1.36
CAPN1-223ENST00000533079 USH2AO75445 5202 aa6.57□□□□□ -1.36
CAPN1-223ENST00000533079 SSPOA2VEC9 5147 aa6.57□□□□□ -1.36
CAPN1-223ENST00000533079 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
CAPN1-223ENST00000533079 Q5XG85 94 aa6.56□□□□□ -1.36
CAPN1-223ENST00000533079 HRCT1Q6UXD1 115 aa6.56□□□□□ -1.36
CAPN1-223ENST00000533079 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
CAPN1-223ENST00000533079 SS18L2Q9UHA2 77 aa6.55□□□□□ -1.36
CAPN1-223ENST00000533079 J3KT08 172 aa6.54□□□□□ -1.36
CAPN1-223ENST00000533079 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
CAPN1-223ENST00000533079 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
CAPN1-223ENST00000533079 ATOX1O00244 68 aa6.52□□□□□ -1.37
CAPN1-223ENST00000533079 DSCR10P59022 87 aa6.52□□□□□ -1.37
CAPN1-223ENST00000533079 A0A087WVE0 104 aa6.51□□□□□ -1.37
CAPN1-223ENST00000533079 IGKV4-1P06312 121 aa6.51□□□□□ -1.37
CAPN1-223ENST00000533079 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
CAPN1-223ENST00000533079 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
CAPN1-223ENST00000533079 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
CAPN1-223ENST00000533079 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
CAPN1-223ENST00000533079 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
CAPN1-223ENST00000533079 Q96NJ1 140 aa6.48□□□□□ -1.37
CAPN1-223ENST00000533079 A8MWP4 228 aa6.47□□□□□ -1.37
CAPN1-223ENST00000533079 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
CAPN1-223ENST00000533079 Q8N9L7 120 aa6.45□□□□□ -1.38
CAPN1-223ENST00000533079 NDUFB1O75438 58 aa6.44□□□□□ -1.38
CAPN1-223ENST00000533079 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
CAPN1-223ENST00000533079 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
CAPN1-223ENST00000533079 K7EQZ3 153 aa6.43□□□□□ -1.38
CAPN1-223ENST00000533079 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
CAPN1-223ENST00000533079 COX7CP15954 63 aa6.42□□□□□ -1.38
CAPN1-223ENST00000533079 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
CAPN1-223ENST00000533079 ATP11AUNQ6ZP68 121 aa6.42□□□□□ -1.38
CAPN1-223ENST00000533079 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
CAPN1-223ENST00000533079 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
CAPN1-223ENST00000533079 UQCRQO14949 82 aa6.41□□□□□ -1.38
CAPN1-223ENST00000533079 Q75L30 129 aa6.4□□□□□ -1.38
CAPN1-223ENST00000533079 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
CAPN1-223ENST00000533079 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
CAPN1-223ENST00000533079 MT2AP02795 61 aa6.35□□□□□ -1.39
CAPN1-223ENST00000533079 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
CAPN1-223ENST00000533079 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
CAPN1-223ENST00000533079 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
CAPN1-223ENST00000533079 LCE2BO14633 110 aa6.34□□□□□ -1.39
CAPN1-223ENST00000533079 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
CAPN1-223ENST00000533079 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
CAPN1-223ENST00000533079 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
CAPN1-223ENST00000533079 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
CAPN1-223ENST00000533079 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
CAPN1-223ENST00000533079 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
CAPN1-223ENST00000533079 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
CAPN1-223ENST00000533079 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
CAPN1-223ENST00000533079 MT1FP04733 61 aa6.29□□□□□ -1.4
CAPN1-223ENST00000533079 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
CAPN1-223ENST00000533079 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
CAPN1-223ENST00000533079 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
CAPN1-223ENST00000533079 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
CAPN1-223ENST00000533079 LINC00313P59037 77 aa6.26□□□□□ -1.41
CAPN1-223ENST00000533079 H3BPC8 53 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 NDUFC1O43677 76 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
CAPN1-223ENST00000533079 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
CAPN1-223ENST00000533079 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
CAPN1-223ENST00000533079 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
CAPN1-223ENST00000533079 A8MUU9 505 aa6.21□□□□□ -1.42
CAPN1-223ENST00000533079 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
CAPN1-223ENST00000533079 MP68P56378 58 aa6.21□□□□□ -1.42
CAPN1-223ENST00000533079 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
CAPN1-223ENST00000533079 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
CAPN1-223ENST00000533079 TMEM258P61165 79 aa6.18□□□□□ -1.42
CAPN1-223ENST00000533079 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms