RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 UQCR11O14957 56 aa5.62□□□□□ -1.51
BDNF-216ENST00000532997 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
BDNF-216ENST00000532997 SPINK7P58062 85 aa5.61□□□□□ -1.51
BDNF-216ENST00000532997 LY6G6CO95867 125 aa5.61□□□□□ -1.51
BDNF-216ENST00000532997 A6NN06 94 aa5.59□□□□□ -1.51
BDNF-216ENST00000532997 A8MU10 97 aa5.59□□□□□ -1.52
BDNF-216ENST00000532997 Q6ZRN7 208 aaPredicted RBP5.59□□□□□ -1.52
BDNF-216ENST00000532997 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
BDNF-216ENST00000532997 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
BDNF-216ENST00000532997 Q5W150 140 aa5.56□□□□□ -1.52
BDNF-216ENST00000532997 A0A087X002 238 aa5.55□□□□□ -1.52
BDNF-216ENST00000532997 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
BDNF-216ENST00000532997 STAB2Q8WWQ8 2551 aa5.55□□□□□ -1.52
BDNF-216ENST00000532997 PKD1L1Q8TDX9 2849 aa5.54□□□□□ -1.52
BDNF-216ENST00000532997 SPINK1P00995 79 aa5.53□□□□□ -1.52
BDNF-216ENST00000532997 ZNF469Q96JG9 3925 aaPredicted RBP5.52□□□□□ -1.53
BDNF-216ENST00000532997 K7ERS5 55 aa5.52□□□□□ -1.53
BDNF-216ENST00000532997 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
BDNF-216ENST00000532997 OTOGQ6ZRI0 2925 aa5.5□□□□□ -1.53
BDNF-216ENST00000532997 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.53
BDNF-216ENST00000532997 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
BDNF-216ENST00000532997 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
BDNF-216ENST00000532997 H3BS24 57 aa5.42□□□□□ -1.54
BDNF-216ENST00000532997 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
BDNF-216ENST00000532997 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
BDNF-216ENST00000532997 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
BDNF-216ENST00000532997 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
BDNF-216ENST00000532997 FBN1P35555 2871 aaKnown RBP5.4□□□□□ -1.54
BDNF-216ENST00000532997 Q8N1X5 172 aa5.39□□□□□ -1.55
BDNF-216ENST00000532997 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
BDNF-216ENST00000532997 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
BDNF-216ENST00000532997 SRRM2Q9UQ35 2752 aaKnown RBP5.32□□□□□ -1.56
BDNF-216ENST00000532997 A0A1B0GU33 70 aa5.31□□□□□ -1.56
BDNF-216ENST00000532997 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
BDNF-216ENST00000532997 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
BDNF-216ENST00000532997 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
BDNF-216ENST00000532997 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
BDNF-216ENST00000532997 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
BDNF-216ENST00000532997 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
BDNF-216ENST00000532997 Q6ZSA8 131 aa5.24□□□□□ -1.57
BDNF-216ENST00000532997 HUWE1Q7Z6Z7 4374 aaKnown RBP5.23□□□□□ -1.57
BDNF-216ENST00000532997 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
BDNF-216ENST00000532997 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
BDNF-216ENST00000532997 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
BDNF-216ENST00000532997 SMR3BP02814 79 aaPredicted RBP5.18□□□□□ -1.58
BDNF-216ENST00000532997 TGP01266 2768 aa5.17□□□□□ -1.58
BDNF-216ENST00000532997 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
BDNF-216ENST00000532997 A8MUU9 505 aa5.16□□□□□ -1.58
BDNF-216ENST00000532997 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
BDNF-216ENST00000532997 C20orf166-AS1Q96NR2 134 aa5.15□□□□□ -1.58
BDNF-216ENST00000532997 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
BDNF-216ENST00000532997 H0YAA0 97 aa5.11□□□□□ -1.59
BDNF-216ENST00000532997 DNAH1Q9P2D7 4330 aa5.1□□□□□ -1.59
BDNF-216ENST00000532997 RPL37P61927 97 aaKnown RBP5.1□□□□□ -1.59
BDNF-216ENST00000532997 ROMO1P60602 79 aa5.09□□□□□ -1.59
BDNF-216ENST00000532997 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
BDNF-216ENST00000532997 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
BDNF-216ENST00000532997 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
BDNF-216ENST00000532997 MEGF8Q7Z7M0 2845 aa5.07□□□□□ -1.6
BDNF-216ENST00000532997 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
BDNF-216ENST00000532997 A0A0D9SG42 100 aa5.07□□□□□ -1.6
BDNF-216ENST00000532997 DMBT1Q9UGM3 2413 aaPredicted RBP5.05□□□□□ -1.6
BDNF-216ENST00000532997 COL7A1Q02388 2944 aa5.05□□□□□ -1.6
BDNF-216ENST00000532997 DNAH9Q9NYC9 4486 aa5.05□□□□□ -1.6
BDNF-216ENST00000532997 S4R3F8 94 aa5.04□□□□□ -1.6
BDNF-216ENST00000532997 FBN3Q75N90 2809 aa5.04□□□□□ -1.6
BDNF-216ENST00000532997 ANK2Q01484 3957 aa4.99□□□□□ -1.61
BDNF-216ENST00000532997 CMYA5Q8N3K9 4069 aa4.99□□□□□ -1.61
BDNF-216ENST00000532997 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
BDNF-216ENST00000532997 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
BDNF-216ENST00000532997 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
BDNF-216ENST00000532997 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
BDNF-216ENST00000532997 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
BDNF-216ENST00000532997 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
BDNF-216ENST00000532997 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
BDNF-216ENST00000532997 J3QL48 77 aa4.94□□□□□ -1.62
BDNF-216ENST00000532997 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
BDNF-216ENST00000532997 DYNC2H1Q8NCM8 4307 aaKnown RBP4.93□□□□□ -1.62
BDNF-216ENST00000532997 Q5VSD8 79 aa4.86□□□□□ -1.63
BDNF-216ENST00000532997 M0QZ58 72 aa4.85□□□□□ -1.63
BDNF-216ENST00000532997 STARD9Q9P2P6 4700 aa4.83□□□□□ -1.64
BDNF-216ENST00000532997 XP32Q5T750 250 aa4.82□□□□□ -1.64
BDNF-216ENST00000532997 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
BDNF-216ENST00000532997 LYSTQ99698 3801 aa4.81□□□□□ -1.64
BDNF-216ENST00000532997 A0A1B0GVY2 172 aa4.8□□□□□ -1.64
BDNF-216ENST00000532997 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
BDNF-216ENST00000532997 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
BDNF-216ENST00000532997 DNAH11Q96DT5 4516 aa4.79□□□□□ -1.64
BDNF-216ENST00000532997 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
BDNF-216ENST00000532997 R4GN34 69 aa4.77□□□□□ -1.65
BDNF-216ENST00000532997 P0C880 135 aa4.77□□□□□ -1.65
BDNF-216ENST00000532997 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
BDNF-216ENST00000532997 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
BDNF-216ENST00000532997 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
BDNF-216ENST00000532997 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
BDNF-216ENST00000532997 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
BDNF-216ENST00000532997 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
BDNF-216ENST00000532997 TPRXLQ17RH7 258 aa4.71□□□□□ -1.65
BDNF-216ENST00000532997 KRTAP3-3Q9BYR6 98 aa4.71□□□□□ -1.65
BDNF-216ENST00000532997 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms