RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 KRTAP10-2P60368 255 aa8.81□□□□□ -1
SSH3-210ENST00000532881 A8MUN3 132 aa8.8□□□□□ -1
SSH3-210ENST00000532881 A0A1B0GVX0 72 aa8.8□□□□□ -1
SSH3-210ENST00000532881 A8MU10 97 aa8.8□□□□□ -1
SSH3-210ENST00000532881 CD164Q04900 197 aa8.79□□□□□ -1
SSH3-210ENST00000532881 Q1T7F1 81 aa8.79□□□□□ -1
SSH3-210ENST00000532881 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
SSH3-210ENST00000532881 ASB16-AS1Q495Z4 193 aa8.78□□□□□ -1
SSH3-210ENST00000532881 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
SSH3-210ENST00000532881 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
SSH3-210ENST00000532881 H3BPC8 53 aa8.74□□□□□ -1.01
SSH3-210ENST00000532881 PKD1P98161 4303 aa8.73□□□□□ -1.01
SSH3-210ENST00000532881 Q5W150 140 aa8.73□□□□□ -1.01
SSH3-210ENST00000532881 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
SSH3-210ENST00000532881 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
SSH3-210ENST00000532881 COA5Q86WW8 74 aa8.72□□□□□ -1.01
SSH3-210ENST00000532881 FAT2Q9NYQ8 4349 aa8.72□□□□□ -1.01
SSH3-210ENST00000532881 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.01
SSH3-210ENST00000532881 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
SSH3-210ENST00000532881 IGLV7-46A0A075B6I9 117 aa8.7□□□□□ -1.02
SSH3-210ENST00000532881 V9GYY9 64 aa8.69□□□□□ -1.02
SSH3-210ENST00000532881 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
SSH3-210ENST00000532881 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SSH3-210ENST00000532881 Q5VV11 94 aa8.68□□□□□ -1.02
SSH3-210ENST00000532881 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
SSH3-210ENST00000532881 KRTAP10-1P60331 282 aa8.66□□□□□ -1.02
SSH3-210ENST00000532881 KRTAP13-2Q52LG2 175 aa8.64□□□□□ -1.03
SSH3-210ENST00000532881 SPAG11AQ6PDA7 123 aa8.64□□□□□ -1.03
SSH3-210ENST00000532881 PKHD1P08F94 4074 aa8.63□□□□□ -1.03
SSH3-210ENST00000532881 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
SSH3-210ENST00000532881 HRES1P13985 223 aa8.62□□□□□ -1.03
SSH3-210ENST00000532881 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
SSH3-210ENST00000532881 C1orf195Q5TG92 126 aa8.58□□□□□ -1.04
SSH3-210ENST00000532881 PRR26Q8N8Z3 221 aa8.57□□□□□ -1.04
SSH3-210ENST00000532881 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
SSH3-210ENST00000532881 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
SSH3-210ENST00000532881 LINC00313P59037 77 aa8.53□□□□□ -1.04
SSH3-210ENST00000532881 KRTAP1-4P0C5Y4 121 aa8.51□□□□□ -1.05
SSH3-210ENST00000532881 LCA10Q71F78 164 aa8.51□□□□□ -1.05
SSH3-210ENST00000532881 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
SSH3-210ENST00000532881 A6NED7 52 aa8.5□□□□□ -1.05
SSH3-210ENST00000532881 Q6ZSA8 131 aa8.5□□□□□ -1.05
SSH3-210ENST00000532881 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
SSH3-210ENST00000532881 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
SSH3-210ENST00000532881 SPINK7P58062 85 aa8.45□□□□□ -1.06
SSH3-210ENST00000532881 Q75L30 129 aa8.45□□□□□ -1.06
SSH3-210ENST00000532881 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
SSH3-210ENST00000532881 FAT1Q14517 4588 aa8.44□□□□□ -1.06
SSH3-210ENST00000532881 C8orf87E5RJ46 101 aa8.43□□□□□ -1.06
SSH3-210ENST00000532881 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
SSH3-210ENST00000532881 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
SSH3-210ENST00000532881 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
SSH3-210ENST00000532881 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
SSH3-210ENST00000532881 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
SSH3-210ENST00000532881 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
SSH3-210ENST00000532881 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
SSH3-210ENST00000532881 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
SSH3-210ENST00000532881 DYNC1H1Q14204 4646 aaKnown RBP8.37□□□□□ -1.07
SSH3-210ENST00000532881 ACYP2P14621 99 aa8.36□□□□□ -1.07
SSH3-210ENST00000532881 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
SSH3-210ENST00000532881 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
SSH3-210ENST00000532881 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
SSH3-210ENST00000532881 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
SSH3-210ENST00000532881 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
SSH3-210ENST00000532881 Q8N1X5 172 aa8.26□□□□□ -1.09
SSH3-210ENST00000532881 ATP11AUNQ6ZP68 121 aa8.25□□□□□ -1.09
SSH3-210ENST00000532881 SPINK1P00995 79 aa8.24□□□□□ -1.09
SSH3-210ENST00000532881 C7orf65Q6ZTY9 151 aa8.24□□□□□ -1.09
SSH3-210ENST00000532881 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
SSH3-210ENST00000532881 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
SSH3-210ENST00000532881 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
SSH3-210ENST00000532881 A6NN06 94 aa8.21□□□□□ -1.1
SSH3-210ENST00000532881 A0A1B0GU69 56 aa8.2□□□□□ -1.1
SSH3-210ENST00000532881 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
SSH3-210ENST00000532881 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
SSH3-210ENST00000532881 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
SSH3-210ENST00000532881 RYR2Q92736 4967 aa8.12□□□□□ -1.11
SSH3-210ENST00000532881 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
SSH3-210ENST00000532881 A0A1B0GVY2 172 aa8.08□□□□□ -1.12
SSH3-210ENST00000532881 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
SSH3-210ENST00000532881 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
SSH3-210ENST00000532881 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
SSH3-210ENST00000532881 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
SSH3-210ENST00000532881 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
SSH3-210ENST00000532881 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
SSH3-210ENST00000532881 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
SSH3-210ENST00000532881 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
SSH3-210ENST00000532881 UQCR11O14957 56 aa8□□□□□ -1.13
SSH3-210ENST00000532881 HSPG2P98160 4391 aa7.99□□□□□ -1.13
SSH3-210ENST00000532881 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
SSH3-210ENST00000532881 A8MUU9 505 aa7.98□□□□□ -1.13
SSH3-210ENST00000532881 C20orf166-AS1Q96NR2 134 aa7.98□□□□□ -1.13
SSH3-210ENST00000532881 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
SSH3-210ENST00000532881 H3BS24 57 aa7.96□□□□□ -1.13
SSH3-210ENST00000532881 TNXBP22105 4242 aa7.95□□□□□ -1.14
SSH3-210ENST00000532881 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
SSH3-210ENST00000532881 RYR3Q15413 4870 aa7.93□□□□□ -1.14
SSH3-210ENST00000532881 KRTAP17-1Q9BYP8 105 aa7.87□□□□□ -1.15
SSH3-210ENST00000532881 H0YAA0 97 aa7.85□□□□□ -1.15
SSH3-210ENST00000532881 LPAP08519 4548 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms