RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	ANKRD29	Q8N6D5	301 aa		4.91	□□□□□ -1.62
PPFIA1-223	ENST00000532793	RBM12B-AS1	Q9P1G2	102 aa		4.91	□□□□□ -1.62
PPFIA1-223	ENST00000532793	PRO1854	Q9UHT4	67 aa		4.91	□□□□□ -1.62
PPFIA1-223	ENST00000532793		H3BQ85	93 aa		4.9	□□□□□ -1.63
PPFIA1-223	ENST00000532793	CEND1	Q8N111	149 aa		4.9	□□□□□ -1.63
PPFIA1-223	ENST00000532793	VAMP8	Q9BV40	100 aa		4.9	□□□□□ -1.63
PPFIA1-223	ENST00000532793	FLG	P20930	4061 aa	Predicted RBP	4.89	□□□□□ -1.63
PPFIA1-223	ENST00000532793	FXYD2	P54710	66 aa		4.89	□□□□□ -1.63
PPFIA1-223	ENST00000532793	ORMDL1	Q9P0S3	153 aa		4.89	□□□□□ -1.63
PPFIA1-223	ENST00000532793		A0A1B0GV72	72 aa		4.88	□□□□□ -1.63
PPFIA1-223	ENST00000532793	PSMB2	P49721	201 aa		4.88	□□□□□ -1.63
PPFIA1-223	ENST00000532793	TRBV7-4	A0A0J9YYF1	115 aa		4.87	□□□□□ -1.63
PPFIA1-223	ENST00000532793		A0A1W2PNM2	257 aa		4.87	□□□□□ -1.63
PPFIA1-223	ENST00000532793	TRAC	P01848	142 aa		4.87	□□□□□ -1.63
PPFIA1-223	ENST00000532793	COX6C	P09669	75 aa		4.87	□□□□□ -1.63
PPFIA1-223	ENST00000532793	LCE1E	Q5T753	118 aa		4.87	□□□□□ -1.63
PPFIA1-223	ENST00000532793	TMEM256-PLSCR3	K7ERE1	68 aa		4.86	□□□□□ -1.63
PPFIA1-223	ENST00000532793	TRIAP1	O43715	76 aa		4.86	□□□□□ -1.63
PPFIA1-223	ENST00000532793	KRTAP5-4	Q6L8H1	288 aa		4.86	□□□□□ -1.63
PPFIA1-223	ENST00000532793	MTURN	Q8N3F0	131 aa		4.86	□□□□□ -1.63
PPFIA1-223	ENST00000532793	IGHV6-1	A0A0B4J1U7	121 aa		4.85	□□□□□ -1.63
PPFIA1-223	ENST00000532793	CCK	P06307	115 aa		4.85	□□□□□ -1.63
PPFIA1-223	ENST00000532793	KRTAP4-4	Q9BYR3	166 aa		4.85	□□□□□ -1.63
PPFIA1-223	ENST00000532793	DEFB116	Q30KQ4	102 aa		4.84	□□□□□ -1.63
PPFIA1-223	ENST00000532793	VPS25	Q9BRG1	176 aa		4.84	□□□□□ -1.63
PPFIA1-223	ENST00000532793	KRTAP16-1	A8MUX0	517 aa		4.83	□□□□□ -1.64
PPFIA1-223	ENST00000532793		K7ERJ3	54 aa		4.83	□□□□□ -1.64
PPFIA1-223	ENST00000532793	C8orf87	E5RJ46	101 aa		4.82	□□□□□ -1.64
PPFIA1-223	ENST00000532793	TMA7	Q9Y2S6	64 aa	Known RBP	4.82	□□□□□ -1.64
PPFIA1-223	ENST00000532793	HSD52	Q0P140	79 aa		4.81	□□□□□ -1.64
PPFIA1-223	ENST00000532793	LINC00472	Q9H8W2	130 aa		4.81	□□□□□ -1.64
PPFIA1-223	ENST00000532793	HRES1	P13985	223 aa		4.8	□□□□□ -1.64
PPFIA1-223	ENST00000532793	UBE2V1	Q13404	147 aa		4.8	□□□□□ -1.64
PPFIA1-223	ENST00000532793	C21orf62-AS1	Q17RA5	79 aa		4.8	□□□□□ -1.64
PPFIA1-223	ENST00000532793	NOTCH2NL	Q7Z3S9	236 aa		4.8	□□□□□ -1.64
PPFIA1-223	ENST00000532793	DSCR8	Q96T75	97 aa		4.8	□□□□□ -1.64
PPFIA1-223	ENST00000532793		A0A1B0GVX0	72 aa		4.79	□□□□□ -1.64
PPFIA1-223	ENST00000532793	MT2A	P02795	61 aa		4.79	□□□□□ -1.64
PPFIA1-223	ENST00000532793	KRTAP10-10	P60014	251 aa		4.79	□□□□□ -1.64
PPFIA1-223	ENST00000532793	RBM3	P98179	157 aa	Known RBP	4.79	□□□□□ -1.64
PPFIA1-223	ENST00000532793		J3KT08	172 aa		4.78	□□□□□ -1.64
PPFIA1-223	ENST00000532793	SCGB1C2	P0DMR2	95 aa		4.78	□□□□□ -1.64
PPFIA1-223	ENST00000532793	LYRM7	Q5U5X0	104 aa		4.78	□□□□□ -1.64
PPFIA1-223	ENST00000532793	KRTAP2-2	Q9BYT5	123 aa		4.78	□□□□□ -1.64
PPFIA1-223	ENST00000532793	NDUFB1	O75438	58 aa		4.77	□□□□□ -1.65
PPFIA1-223	ENST00000532793	MPLKIP	Q8TAP9	179 aa		4.77	□□□□□ -1.65
PPFIA1-223	ENST00000532793	ZCCHC13	Q8WW36	166 aa	Known RBP	4.76	□□□□□ -1.65
PPFIA1-223	ENST00000532793	LINC00846	Q9NV44	126 aa		4.76	□□□□□ -1.65
PPFIA1-223	ENST00000532793	UQCR10	Q9UDW1	63 aa		4.76	□□□□□ -1.65
PPFIA1-223	ENST00000532793		C9JAW5	83 aa		4.75	□□□□□ -1.65
PPFIA1-223	ENST00000532793	MT1F	P04733	61 aa		4.75	□□□□□ -1.65
PPFIA1-223	ENST00000532793	SPINK7	P58062	85 aa		4.74	□□□□□ -1.65
PPFIA1-223	ENST00000532793	BAALC-AS2	P0C853	105 aa		4.71	□□□□□ -1.66
PPFIA1-223	ENST00000532793		A8MWP4	228 aa		4.7	□□□□□ -1.66
PPFIA1-223	ENST00000532793		Q6ZQT0	140 aa		4.7	□□□□□ -1.66
PPFIA1-223	ENST00000532793	WFDC13	Q8IUB5	93 aa		4.7	□□□□□ -1.66
PPFIA1-223	ENST00000532793	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.69	□□□□□ -1.66
PPFIA1-223	ENST00000532793		Q8N9P0	234 aa	Predicted RBP	4.69	□□□□□ -1.66
PPFIA1-223	ENST00000532793		A0A1B0GW54	56 aa		4.68	□□□□□ -1.66
PPFIA1-223	ENST00000532793	NAA38	Q9BRA0	125 aa	Known RBP	4.68	□□□□□ -1.66
PPFIA1-223	ENST00000532793	C8orf17	Q9NRJ1	99 aa		4.68	□□□□□ -1.66
PPFIA1-223	ENST00000532793	ATXN8	Q156A1	80 aa		4.67	□□□□□ -1.66
PPFIA1-223	ENST00000532793	PDE6G	P18545	87 aa		4.66	□□□□□ -1.66
PPFIA1-223	ENST00000532793	USH2A	O75445	5202 aa		4.66	□□□□□ -1.66
PPFIA1-223	ENST00000532793	SSPO	A2VEC9	5147 aa		4.65	□□□□□ -1.66
PPFIA1-223	ENST00000532793		Q6ZVQ6	151 aa		4.65	□□□□□ -1.67
PPFIA1-223	ENST00000532793	LOC110117498	A0A087WWA1	95 aa		4.64	□□□□□ -1.67
PPFIA1-223	ENST00000532793	IGKV3D-7	A0A0C4DH55	119 aa		4.64	□□□□□ -1.67
PPFIA1-223	ENST00000532793		M0R143	59 aa		4.63	□□□□□ -1.67
PPFIA1-223	ENST00000532793	NDUFS5	O43920	106 aa		4.63	□□□□□ -1.67
PPFIA1-223	ENST00000532793	NREP	Q16612	68 aa		4.63	□□□□□ -1.67
PPFIA1-223	ENST00000532793	LOC105371267	A0A1B0GV96	52 aa		4.62	□□□□□ -1.67
PPFIA1-223	ENST00000532793	SMIM6	P0DI80	62 aa		4.62	□□□□□ -1.67
PPFIA1-223	ENST00000532793	C14orf132	Q9NPU4	83 aa		4.62	□□□□□ -1.67
PPFIA1-223	ENST00000532793	PRR15	Q8IV56	129 aa		4.61	□□□□□ -1.67
PPFIA1-223	ENST00000532793	TMEM254	Q8TBM7	123 aa		4.61	□□□□□ -1.67
PPFIA1-223	ENST00000532793	MRPL34	Q9BQ48	92 aa	Known RBP	4.61	□□□□□ -1.67
PPFIA1-223	ENST00000532793	KRTAP19-6	Q3LI70	58 aa		4.6	□□□□□ -1.67
PPFIA1-223	ENST00000532793	H1FX-AS1	Q4G0G2	97 aa		4.59	□□□□□ -1.67
PPFIA1-223	ENST00000532793	hDV103S1	A0JD37	113 aa		4.58	□□□□□ -1.68
PPFIA1-223	ENST00000532793	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.57	□□□□□ -1.68
PPFIA1-223	ENST00000532793	MMP24-AS1	A0A0U1RRL7	71 aa		4.57	□□□□□ -1.68
PPFIA1-223	ENST00000532793	IGKV2D-30	A0A075B6S6	120 aa		4.56	□□□□□ -1.68
PPFIA1-223	ENST00000532793	IGKV2-30	P06310	120 aa		4.56	□□□□□ -1.68
PPFIA1-223	ENST00000532793	C7orf65	Q6ZTY9	151 aa		4.56	□□□□□ -1.68
PPFIA1-223	ENST00000532793	TAX1BP3	O14907	124 aa		4.55	□□□□□ -1.68
PPFIA1-223	ENST00000532793	KRTAP23-1	A1A580	65 aa		4.54	□□□□□ -1.68
PPFIA1-223	ENST00000532793		K7EQZ3	153 aa		4.54	□□□□□ -1.68
PPFIA1-223	ENST00000532793	BATF	Q16520	125 aa		4.54	□□□□□ -1.68
PPFIA1-223	ENST00000532793	BPY2	O14599	106 aa		4.53	□□□□□ -1.68
PPFIA1-223	ENST00000532793	TSTD3	H0UI37	97 aa		4.52	□□□□□ -1.69
PPFIA1-223	ENST00000532793	FAM236A	A0A1B0GUQ0	79 aa		4.5	□□□□□ -1.69
PPFIA1-223	ENST00000532793	FAM236B	A0A1B0GV22	79 aa		4.5	□□□□□ -1.69
PPFIA1-223	ENST00000532793		H3BT86	120 aa		4.5	□□□□□ -1.69
PPFIA1-223	ENST00000532793	MACF1	Q9UPN3	7388 aa	Known RBP	4.5	□□□□□ -1.69
PPFIA1-223	ENST00000532793		A0A1W2PPM0	123 aa		4.49	□□□□□ -1.69
PPFIA1-223	ENST00000532793	HCG22	E2RYF7	251 aa		4.49	□□□□□ -1.69
PPFIA1-223	ENST00000532793	CASC2	Q6XLA1	102 aa		4.49	□□□□□ -1.69
PPFIA1-223	ENST00000532793	CXCL6	P80162	114 aa		4.47	□□□□□ -1.69
PPFIA1-223	ENST00000532793	C4orf26	Q17RF5	130 aa		4.47	□□□□□ -1.69

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