RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 LOC110117498A0A087WWA1 95 aa10.24□□□□□ -0.77
UBXN1-212ENST00000531625 Q6ZQT0 140 aa10.24□□□□□ -0.77
UBXN1-212ENST00000531625 PDE6GP18545 87 aa10.23□□□□□ -0.77
UBXN1-212ENST00000531625 M0R2T5 61 aa10.19□□□□□ -0.78
UBXN1-212ENST00000531625 F8W1H4 67 aa10.16□□□□□ -0.78
UBXN1-212ENST00000531625 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.78
UBXN1-212ENST00000531625 A0A1B0GV90 55 aa10.13□□□□□ -0.79
UBXN1-212ENST00000531625 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
UBXN1-212ENST00000531625 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
UBXN1-212ENST00000531625 Q96NJ1 140 aa10.13□□□□□ -0.79
UBXN1-212ENST00000531625 A0A1B0GW54 56 aa10.12□□□□□ -0.79
UBXN1-212ENST00000531625 SIGMAR1Q99720 223 aa10.1□□□□□ -0.79
UBXN1-212ENST00000531625 DEFB116Q30KQ4 102 aa10.09□□□□□ -0.79
UBXN1-212ENST00000531625 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
UBXN1-212ENST00000531625 IGKV4-1P06312 121 aa10.08□□□□□ -0.8
UBXN1-212ENST00000531625 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
UBXN1-212ENST00000531625 NREPQ16612 68 aa10.03□□□□□ -0.8
UBXN1-212ENST00000531625 J3KT08 172 aa10□□□□□ -0.81
UBXN1-212ENST00000531625 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
UBXN1-212ENST00000531625 DSCR10P59022 87 aa9.96□□□□□ -0.82
UBXN1-212ENST00000531625 IGHV6-1A0A0B4J1U7 121 aa9.95□□□□□ -0.82
UBXN1-212ENST00000531625 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.95□□□□□ -0.82
UBXN1-212ENST00000531625 Q6ZVQ6 151 aa9.93□□□□□ -0.82
UBXN1-212ENST00000531625 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
UBXN1-212ENST00000531625 NDUFB1O75438 58 aa9.92□□□□□ -0.82
UBXN1-212ENST00000531625 LINC00846Q9NV44 126 aa9.92□□□□□ -0.82
UBXN1-212ENST00000531625 LINC00313P59037 77 aa9.91□□□□□ -0.82
UBXN1-212ENST00000531625 SSPOA2VEC9 5147 aa9.91□□□□□ -0.82
UBXN1-212ENST00000531625 A8MWP4 228 aa9.9□□□□□ -0.82
UBXN1-212ENST00000531625 UBL5Q9BZL1 73 aa9.9□□□□□ -0.82
UBXN1-212ENST00000531625 USH2AO75445 5202 aa9.9□□□□□ -0.82
UBXN1-212ENST00000531625 BPY2O14599 106 aa9.89□□□□□ -0.83
UBXN1-212ENST00000531625 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
UBXN1-212ENST00000531625 IGKV3D-7A0A0C4DH55 119 aa9.87□□□□□ -0.83
UBXN1-212ENST00000531625 C8orf87E5RJ46 101 aa9.87□□□□□ -0.83
UBXN1-212ENST00000531625 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
UBXN1-212ENST00000531625 Q75L30 129 aa9.85□□□□□ -0.83
UBXN1-212ENST00000531625 PRR15Q8IV56 129 aa9.83□□□□□ -0.84
UBXN1-212ENST00000531625 KRTAP9-8Q9BYQ0 159 aa9.83□□□□□ -0.84
UBXN1-212ENST00000531625 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
UBXN1-212ENST00000531625 ACYP1P07311 99 aa9.81□□□□□ -0.84
UBXN1-212ENST00000531625 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
UBXN1-212ENST00000531625 C8orf17Q9NRJ1 99 aa9.81□□□□□ -0.84
UBXN1-212ENST00000531625 K7EQZ3 153 aa9.8□□□□□ -0.84
UBXN1-212ENST00000531625 FAM240AA0A1B0GVK7 77 aa9.79□□□□□ -0.84
UBXN1-212ENST00000531625 A8MUU9 505 aa9.79□□□□□ -0.84
UBXN1-212ENST00000531625 Q8N9L7 120 aa9.77□□□□□ -0.85
UBXN1-212ENST00000531625 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
UBXN1-212ENST00000531625 MMP24-AS1A0A0U1RRL7 71 aa9.73□□□□□ -0.85
UBXN1-212ENST00000531625 CXCL6P80162 114 aa9.71□□□□□ -0.86
UBXN1-212ENST00000531625 J3QR89 54 aa9.7□□□□□ -0.86
UBXN1-212ENST00000531625 hDV103S1A0JD37 113 aa9.69□□□□□ -0.86
UBXN1-212ENST00000531625 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
UBXN1-212ENST00000531625 WFDC13Q8IUB5 93 aa9.66□□□□□ -0.86
UBXN1-212ENST00000531625 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
UBXN1-212ENST00000531625 MRPL34Q9BQ48 92 aaKnown RBP9.66□□□□□ -0.86
UBXN1-212ENST00000531625 ATP5EP2Q5VTU8 51 aa9.64□□□□□ -0.87
UBXN1-212ENST00000531625 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
UBXN1-212ENST00000531625 MT2AP02795 61 aa9.62□□□□□ -0.87
UBXN1-212ENST00000531625 HCG22E2RYF7 251 aa9.61□□□□□ -0.87
UBXN1-212ENST00000531625 NDUFS5O43920 106 aa9.61□□□□□ -0.87
UBXN1-212ENST00000531625 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
UBXN1-212ENST00000531625 KRTAP19-1Q8IUB9 90 aa9.6□□□□□ -0.87
UBXN1-212ENST00000531625 ZCCHC13Q8WW36 166 aaKnown RBP9.59□□□□□ -0.87
UBXN1-212ENST00000531625 LCE2BO14633 110 aa9.58□□□□□ -0.88
UBXN1-212ENST00000531625 HIST1H4AP62805 103 aaKnown RBP9.55□□□□□ -0.88
UBXN1-212ENST00000531625 K7ERU9 68 aa9.54□□□□□ -0.88
UBXN1-212ENST00000531625 MT1FP04733 61 aa9.54□□□□□ -0.88
UBXN1-212ENST00000531625 KRTAP9-3Q9BYQ3 159 aa9.54□□□□□ -0.88
UBXN1-212ENST00000531625 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
UBXN1-212ENST00000531625 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
UBXN1-212ENST00000531625 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
UBXN1-212ENST00000531625 MPLKIPQ8TAP9 179 aa9.47□□□□□ -0.89
UBXN1-212ENST00000531625 MACF1Q9UPN3 7388 aaKnown RBP9.47□□□□□ -0.89
UBXN1-212ENST00000531625 A0A087WVE0 104 aa9.45□□□□□ -0.9
UBXN1-212ENST00000531625 Q5W150 140 aa9.43□□□□□ -0.9
UBXN1-212ENST00000531625 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
UBXN1-212ENST00000531625 SPINK7P58062 85 aa9.42□□□□□ -0.9
UBXN1-212ENST00000531625 HRES1P13985 223 aa9.41□□□□□ -0.9
UBXN1-212ENST00000531625 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
UBXN1-212ENST00000531625 SYNE2Q8WXH0 6885 aaKnown RBP9.38□□□□□ -0.91
UBXN1-212ENST00000531625 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
UBXN1-212ENST00000531625 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
UBXN1-212ENST00000531625 KRTAP19-6Q3LI70 58 aa9.34□□□□□ -0.91
UBXN1-212ENST00000531625 MT-ATP8P03928 68 aa9.33□□□□□ -0.92
UBXN1-212ENST00000531625 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
UBXN1-212ENST00000531625 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
UBXN1-212ENST00000531625 UQCRQO14949 82 aa9.26□□□□□ -0.93
UBXN1-212ENST00000531625 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
UBXN1-212ENST00000531625 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
UBXN1-212ENST00000531625 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
UBXN1-212ENST00000531625 H0Y9P7 68 aa9.19□□□□□ -0.94
UBXN1-212ENST00000531625 KRTAP6-3Q3LI67 103 aa9.18□□□□□ -0.94
UBXN1-212ENST00000531625 ATOX1O00244 68 aa9.16□□□□□ -0.94
UBXN1-212ENST00000531625 FAM236AA0A1B0GUQ0 79 aa9.15□□□□□ -0.94
UBXN1-212ENST00000531625 FAM236BA0A1B0GV22 79 aa9.15□□□□□ -0.94
UBXN1-212ENST00000531625 LOC101927531A0A1B0GV80 90 aa9.15□□□□□ -0.94
UBXN1-212ENST00000531625 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
UBXN1-212ENST00000531625 CYP4F30PQ9H0H9 118 aa9.12□□□□□ -0.95
UBXN1-212ENST00000531625 MP68P56378 58 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms