RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 Q9BRP9 147 aa5.25□□□□□ -1.57
CHMP4A-205ENST00000531158 PRLHP81277 87 aa5.24□□□□□ -1.57
CHMP4A-205ENST00000531158 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
CHMP4A-205ENST00000531158 Q8NBF4 154 aa5.22□□□□□ -1.57
CHMP4A-205ENST00000531158 UBE2AP49459 152 aa5.21□□□□□ -1.58
CHMP4A-205ENST00000531158 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
CHMP4A-205ENST00000531158 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
CHMP4A-205ENST00000531158 NREPQ16612 68 aa5.2□□□□□ -1.58
CHMP4A-205ENST00000531158 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
CHMP4A-205ENST00000531158 J3KT08 172 aa5.19□□□□□ -1.58
CHMP4A-205ENST00000531158 IGKV4-1P06312 121 aa5.19□□□□□ -1.58
CHMP4A-205ENST00000531158 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
CHMP4A-205ENST00000531158 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
CHMP4A-205ENST00000531158 IGLV8-61A0A075B6I0 122 aa5.18□□□□□ -1.58
CHMP4A-205ENST00000531158 A0A1W2PNM2 257 aa5.18□□□□□ -1.58
CHMP4A-205ENST00000531158 F8WEM9 126 aa5.18□□□□□ -1.58
CHMP4A-205ENST00000531158 BPY2O14599 106 aa5.18□□□□□ -1.58
CHMP4A-205ENST00000531158 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
CHMP4A-205ENST00000531158 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-205ENST00000531158 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-205ENST00000531158 ST20-AS1Q8NBB2 130 aa5.17□□□□□ -1.58
CHMP4A-205ENST00000531158 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
CHMP4A-205ENST00000531158 SPRR1BP22528 89 aa5.16□□□□□ -1.58
CHMP4A-205ENST00000531158 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
CHMP4A-205ENST00000531158 SMIM29Q86T20 159 aa5.16□□□□□ -1.58
CHMP4A-205ENST00000531158 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
CHMP4A-205ENST00000531158 NDUFC1O43677 76 aa5.15□□□□□ -1.59
CHMP4A-205ENST00000531158 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
CHMP4A-205ENST00000531158 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-205ENST00000531158 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
CHMP4A-205ENST00000531158 FAM236DA0A1B0GTK5 79 aa5.12□□□□□ -1.59
CHMP4A-205ENST00000531158 H7BZZ5 65 aa5.12□□□□□ -1.59
CHMP4A-205ENST00000531158 FAM236CP0DP71 79 aa5.12□□□□□ -1.59
CHMP4A-205ENST00000531158 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
CHMP4A-205ENST00000531158 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
CHMP4A-205ENST00000531158 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
CHMP4A-205ENST00000531158 Q8N9L7 120 aa5.11□□□□□ -1.59
CHMP4A-205ENST00000531158 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-205ENST00000531158 MT1HP80294 61 aa5.1□□□□□ -1.59
CHMP4A-205ENST00000531158 DSCR10P59022 87 aa5.09□□□□□ -1.59
CHMP4A-205ENST00000531158 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
CHMP4A-205ENST00000531158 XP32Q5T750 250 aa5.09□□□□□ -1.59
CHMP4A-205ENST00000531158 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
CHMP4A-205ENST00000531158 SPINK1P00995 79 aa5.07□□□□□ -1.6
CHMP4A-205ENST00000531158 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
CHMP4A-205ENST00000531158 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
CHMP4A-205ENST00000531158 HCG22E2RYF7 251 aa5.06□□□□□ -1.6
CHMP4A-205ENST00000531158 H3BS24 57 aa5.06□□□□□ -1.6
CHMP4A-205ENST00000531158 K7EQZ3 153 aa5.06□□□□□ -1.6
CHMP4A-205ENST00000531158 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
CHMP4A-205ENST00000531158 A0A087WSZ3 146 aa5.05□□□□□ -1.6
CHMP4A-205ENST00000531158 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
CHMP4A-205ENST00000531158 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-205ENST00000531158 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
CHMP4A-205ENST00000531158 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-205ENST00000531158 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-205ENST00000531158 MOBPQ13875 183 aa5.03□□□□□ -1.6
CHMP4A-205ENST00000531158 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
CHMP4A-205ENST00000531158 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
CHMP4A-205ENST00000531158 USH2AO75445 5202 aa5.02□□□□□ -1.61
CHMP4A-205ENST00000531158 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
CHMP4A-205ENST00000531158 A8MWP4 228 aa5□□□□□ -1.61
CHMP4A-205ENST00000531158 C5orf47Q569G3 176 aa5□□□□□ -1.61
CHMP4A-205ENST00000531158 PCOTHQ58A44 107 aa5□□□□□ -1.61
CHMP4A-205ENST00000531158 PRR15Q8IV56 129 aa5□□□□□ -1.61
CHMP4A-205ENST00000531158 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
CHMP4A-205ENST00000531158 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
CHMP4A-205ENST00000531158 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
CHMP4A-205ENST00000531158 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
CHMP4A-205ENST00000531158 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
CHMP4A-205ENST00000531158 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
CHMP4A-205ENST00000531158 H3BPC8 53 aa4.98□□□□□ -1.61
CHMP4A-205ENST00000531158 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
CHMP4A-205ENST00000531158 NDUFB1O75438 58 aa4.97□□□□□ -1.61
CHMP4A-205ENST00000531158 MP68P56378 58 aa4.96□□□□□ -1.62
CHMP4A-205ENST00000531158 Q5XG85 94 aa4.96□□□□□ -1.62
CHMP4A-205ENST00000531158 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
CHMP4A-205ENST00000531158 M0R2T5 61 aa4.95□□□□□ -1.62
CHMP4A-205ENST00000531158 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
CHMP4A-205ENST00000531158 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
CHMP4A-205ENST00000531158 C9orf92A6NGG3 77 aa4.94□□□□□ -1.62
CHMP4A-205ENST00000531158 Q96NJ1 140 aa4.94□□□□□ -1.62
CHMP4A-205ENST00000531158 DEFB116Q30KQ4 102 aa4.93□□□□□ -1.62
CHMP4A-205ENST00000531158 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
CHMP4A-205ENST00000531158 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
CHMP4A-205ENST00000531158 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
CHMP4A-205ENST00000531158 SPANXA2-OT1Q8N9U9 137 aa4.91□□□□□ -1.62
CHMP4A-205ENST00000531158 H0Y9P7 68 aa4.9□□□□□ -1.63
CHMP4A-205ENST00000531158 CD164Q04900 197 aa4.9□□□□□ -1.63
CHMP4A-205ENST00000531158 TP53AIP1Q9HCN2 124 aa4.9□□□□□ -1.63
CHMP4A-205ENST00000531158 HRCT1Q6UXD1 115 aa4.89□□□□□ -1.63
CHMP4A-205ENST00000531158 C8orf17Q9NRJ1 99 aa4.89□□□□□ -1.63
CHMP4A-205ENST00000531158 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
CHMP4A-205ENST00000531158 LINC00208Q96KT6 92 aa4.88□□□□□ -1.63
CHMP4A-205ENST00000531158 C4orf26Q17RF5 130 aa4.87□□□□□ -1.63
CHMP4A-205ENST00000531158 LIMD2Q9BT23 127 aa4.86□□□□□ -1.63
CHMP4A-205ENST00000531158 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-205ENST00000531158 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
CHMP4A-205ENST00000531158 C1orf64Q8NEQ6 169 aa4.84□□□□□ -1.63
CHMP4A-205ENST00000531158 MRPL34Q9BQ48 92 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms