RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 C4orf3Q8WVX3 66 aa5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 DEFB131BA0A096LNP1 70 aa5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 KRTAP7-1Q8IUC3 87 aa5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
CAPRIN1-209ENST00000530820 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
CAPRIN1-209ENST00000530820 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
CAPRIN1-209ENST00000530820 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
CAPRIN1-209ENST00000530820 PRR34Q9NV39 138 aa5.22□□□□□ -1.57
CAPRIN1-209ENST00000530820 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
CAPRIN1-209ENST00000530820 A0A1B0GW54 56 aa5.21□□□□□ -1.58
CAPRIN1-209ENST00000530820 KRTAP11-1Q8IUC1 163 aa5.2□□□□□ -1.58
CAPRIN1-209ENST00000530820 ZNF469Q96JG9 3925 aaPredicted RBP5.2□□□□□ -1.58
CAPRIN1-209ENST00000530820 H0YAA0 97 aa5.18□□□□□ -1.58
CAPRIN1-209ENST00000530820 TENM4Q6N022 2769 aa5.18□□□□□ -1.58
CAPRIN1-209ENST00000530820 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
CAPRIN1-209ENST00000530820 ASB16-AS1Q495Z4 193 aa5.18□□□□□ -1.58
CAPRIN1-209ENST00000530820 SPART-AS1P0CW21 52 aa5.17□□□□□ -1.58
CAPRIN1-209ENST00000530820 A0A087WTM6 91 aa5.17□□□□□ -1.58
CAPRIN1-209ENST00000530820 C14orf177Q52M58 125 aa5.17□□□□□ -1.58
CAPRIN1-209ENST00000530820 CIRBP-AS1Q8TBR5 109 aa5.17□□□□□ -1.58
CAPRIN1-209ENST00000530820 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
CAPRIN1-209ENST00000530820 Q96NJ1 140 aa5.16□□□□□ -1.58
CAPRIN1-209ENST00000530820 K7ERS5 55 aa5.15□□□□□ -1.59
CAPRIN1-209ENST00000530820 Q6ZSA8 131 aa5.15□□□□□ -1.59
CAPRIN1-209ENST00000530820 KRTAP10-9P60411 292 aa5.14□□□□□ -1.59
CAPRIN1-209ENST00000530820 KMT2BQ9UMN6 2715 aaPredicted RBP5.13□□□□□ -1.59
CAPRIN1-209ENST00000530820 NUPR2A6NF83 97 aa5.13□□□□□ -1.59
CAPRIN1-209ENST00000530820 APLNQ9ULZ1 77 aa5.12□□□□□ -1.59
CAPRIN1-209ENST00000530820 SPRR1AP35321 89 aa5.12□□□□□ -1.59
CAPRIN1-209ENST00000530820 TPRXLQ17RH7 258 aa5.12□□□□□ -1.59
CAPRIN1-209ENST00000530820 A0A1B0GU33 70 aa5.11□□□□□ -1.59
CAPRIN1-209ENST00000530820 J3QKU1 62 aa5.09□□□□□ -1.59
CAPRIN1-209ENST00000530820 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
CAPRIN1-209ENST00000530820 PANO1I0J062 215 aa5.05□□□□□ -1.6
CAPRIN1-209ENST00000530820 LYSTQ99698 3801 aa5.05□□□□□ -1.6
CAPRIN1-209ENST00000530820 NBDYA0A0U1RRE5 68 aa5.04□□□□□ -1.6
CAPRIN1-209ENST00000530820 SMR3AQ99954 134 aa5.03□□□□□ -1.6
CAPRIN1-209ENST00000530820 LINC01556Q5JQF7 62 aa5.03□□□□□ -1.6
CAPRIN1-209ENST00000530820 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
CAPRIN1-209ENST00000530820 LY6G6CO95867 125 aa4.99□□□□□ -1.61
CAPRIN1-209ENST00000530820 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.62
CAPRIN1-209ENST00000530820 DNAH10Q8IVF4 4471 aa4.96□□□□□ -1.62
CAPRIN1-209ENST00000530820 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
CAPRIN1-209ENST00000530820 FAM229AH3BQW9 127 aa4.95□□□□□ -1.62
CAPRIN1-209ENST00000530820 WWC2-AS2Q96NR7 200 aa4.93□□□□□ -1.62
CAPRIN1-209ENST00000530820 ALMS1Q8TCU4 4167 aa4.93□□□□□ -1.62
CAPRIN1-209ENST00000530820 J3QL48 77 aa4.91□□□□□ -1.62
CAPRIN1-209ENST00000530820 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.63
CAPRIN1-209ENST00000530820 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.63
CAPRIN1-209ENST00000530820 KRTAP10-3P60369 221 aa4.89□□□□□ -1.63
CAPRIN1-209ENST00000530820 UBE2DNLQ8IWF7 75 aa4.87□□□□□ -1.63
CAPRIN1-209ENST00000530820 KRTAP24-1Q3LI83 254 aa4.86□□□□□ -1.63
CAPRIN1-209ENST00000530820 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.85□□□□□ -1.63
CAPRIN1-209ENST00000530820 SEC61BP60468 96 aaKnown RBP4.85□□□□□ -1.63
CAPRIN1-209ENST00000530820 RPL37P61927 97 aaKnown RBP4.84□□□□□ -1.63
CAPRIN1-209ENST00000530820 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
CAPRIN1-209ENST00000530820 FRAS1Q86XX4 4008 aa4.84□□□□□ -1.64
CAPRIN1-209ENST00000530820 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
CAPRIN1-209ENST00000530820 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
CAPRIN1-209ENST00000530820 SPRR1BP22528 89 aa4.81□□□□□ -1.64
CAPRIN1-209ENST00000530820 ANK2Q01484 3957 aa4.78□□□□□ -1.64
CAPRIN1-209ENST00000530820 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
CAPRIN1-209ENST00000530820 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
CAPRIN1-209ENST00000530820 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
CAPRIN1-209ENST00000530820 ANK3Q12955 4377 aaKnown RBP4.7□□□□□ -1.66
CAPRIN1-209ENST00000530820 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CAPRIN1-209ENST00000530820 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
CAPRIN1-209ENST00000530820 S4R3F8 94 aa4.69□□□□□ -1.66
CAPRIN1-209ENST00000530820 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
CAPRIN1-209ENST00000530820 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
CAPRIN1-209ENST00000530820 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.66
CAPRIN1-209ENST00000530820 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
CAPRIN1-209ENST00000530820 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
CAPRIN1-209ENST00000530820 H3BNG1 76 aa4.61□□□□□ -1.67
CAPRIN1-209ENST00000530820 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
CAPRIN1-209ENST00000530820 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
CAPRIN1-209ENST00000530820 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
CAPRIN1-209ENST00000530820 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
CAPRIN1-209ENST00000530820 CMYA5Q8N3K9 4069 aa4.52□□□□□ -1.69
CAPRIN1-209ENST00000530820 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
CAPRIN1-209ENST00000530820 KMT2AQ03164 3969 aa4.49□□□□□ -1.69
CAPRIN1-209ENST00000530820 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
CAPRIN1-209ENST00000530820 Q6ZRN7 208 aaPredicted RBP4.48□□□□□ -1.69
CAPRIN1-209ENST00000530820 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
CAPRIN1-209ENST00000530820 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
CAPRIN1-209ENST00000530820 R4GN34 69 aa4.45□□□□□ -1.7
CAPRIN1-209ENST00000530820 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
CAPRIN1-209ENST00000530820 XP32Q5T750 250 aa4.42□□□□□ -1.7
CAPRIN1-209ENST00000530820 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
CAPRIN1-209ENST00000530820 MYCBP2O75592 4640 aa4.4□□□□□ -1.7
CAPRIN1-209ENST00000530820 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
CAPRIN1-209ENST00000530820 SMR3BP02814 79 aaPredicted RBP4.37□□□□□ -1.71
CAPRIN1-209ENST00000530820 M0QZ58 72 aa4.36□□□□□ -1.71
CAPRIN1-209ENST00000530820 KRTAP3-3Q9BYR6 98 aa4.33□□□□□ -1.72
CAPRIN1-209ENST00000530820 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
CAPRIN1-209ENST00000530820 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
CAPRIN1-209ENST00000530820 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
CAPRIN1-209ENST00000530820 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms