RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 J3QL48 77 aa9.25□□□□□ -0.93
USP35-203ENST00000529308 UQCR11O14957 56 aa9.25□□□□□ -0.93
USP35-203ENST00000529308 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
USP35-203ENST00000529308 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
USP35-203ENST00000529308 HRES1P13985 223 aa9.22□□□□□ -0.93
USP35-203ENST00000529308 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
USP35-203ENST00000529308 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
USP35-203ENST00000529308 Q6ZR54 194 aa9.15□□□□□ -0.94
USP35-203ENST00000529308 A0A087X002 238 aa9.14□□□□□ -0.95
USP35-203ENST00000529308 KTN1-AS1Q86SY8 53 aa9.13□□□□□ -0.95
USP35-203ENST00000529308 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
USP35-203ENST00000529308 TRRAPQ9Y4A5 3859 aa9.13□□□□□ -0.95
USP35-203ENST00000529308 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
USP35-203ENST00000529308 A0A0D9SG42 100 aa9.1□□□□□ -0.95
USP35-203ENST00000529308 Q5W150 140 aa9.09□□□□□ -0.95
USP35-203ENST00000529308 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
USP35-203ENST00000529308 Q1T7F1 81 aa9.08□□□□□ -0.96
USP35-203ENST00000529308 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
USP35-203ENST00000529308 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
USP35-203ENST00000529308 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
USP35-203ENST00000529308 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
USP35-203ENST00000529308 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
USP35-203ENST00000529308 LCA10Q71F78 164 aa9□□□□□ -0.97
USP35-203ENST00000529308 FBN3Q75N90 2809 aa8.99□□□□□ -0.97
USP35-203ENST00000529308 CDC42SE1Q9NRR8 79 aa8.98□□□□□ -0.97
USP35-203ENST00000529308 LCE6AA0A183 80 aa8.97□□□□□ -0.97
USP35-203ENST00000529308 SPINK7P58062 85 aa8.97□□□□□ -0.97
USP35-203ENST00000529308 ZNF469Q96JG9 3925 aaPredicted RBP8.95□□□□□ -0.98
USP35-203ENST00000529308 Q5VV11 94 aa8.95□□□□□ -0.98
USP35-203ENST00000529308 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
USP35-203ENST00000529308 Q6ZSA8 131 aa8.93□□□□□ -0.98
USP35-203ENST00000529308 H3BS24 57 aa8.92□□□□□ -0.98
USP35-203ENST00000529308 Q5VSD8 79 aa8.92□□□□□ -0.98
USP35-203ENST00000529308 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
USP35-203ENST00000529308 PRAC1Q96KF2 57 aa8.91□□□□□ -0.98
USP35-203ENST00000529308 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
USP35-203ENST00000529308 KRTAP13-1Q8IUC0 172 aa8.88□□□□□ -0.99
USP35-203ENST00000529308 Q75L30 129 aa8.88□□□□□ -0.99
USP35-203ENST00000529308 A0A1B0GU33 70 aa8.88□□□□□ -0.99
USP35-203ENST00000529308 KRTAP13-2Q52LG2 175 aa8.86□□□□□ -0.99
USP35-203ENST00000529308 CRIPTQ9P021 101 aa8.78□□□□□ -1
USP35-203ENST00000529308 DMAC1Q96GE9 116 aa8.76□□□□□ -1.01
USP35-203ENST00000529308 ANK3Q12955 4377 aaKnown RBP8.72□□□□□ -1.01
USP35-203ENST00000529308 A8MU10 97 aa8.72□□□□□ -1.01
USP35-203ENST00000529308 AKAP9Q99996 3911 aa8.7□□□□□ -1.02
USP35-203ENST00000529308 MEGF8Q7Z7M0 2845 aa8.69□□□□□ -1.02
USP35-203ENST00000529308 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
USP35-203ENST00000529308 S4R3F8 94 aa8.65□□□□□ -1.02
USP35-203ENST00000529308 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
USP35-203ENST00000529308 ASB16-AS1Q495Z4 193 aa8.61□□□□□ -1.03
USP35-203ENST00000529308 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
USP35-203ENST00000529308 M0R2T5 61 aa8.59□□□□□ -1.03
USP35-203ENST00000529308 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
USP35-203ENST00000529308 R4GN34 69 aa8.54□□□□□ -1.04
USP35-203ENST00000529308 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
USP35-203ENST00000529308 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
USP35-203ENST00000529308 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
USP35-203ENST00000529308 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
USP35-203ENST00000529308 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
USP35-203ENST00000529308 M0QZ58 72 aa8.42□□□□□ -1.06
USP35-203ENST00000529308 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
USP35-203ENST00000529308 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
USP35-203ENST00000529308 A6NN06 94 aa8.34□□□□□ -1.07
USP35-203ENST00000529308 A8MUU9 505 aa8.3□□□□□ -1.08
USP35-203ENST00000529308 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
USP35-203ENST00000529308 ROMO1P60602 79 aa8.27□□□□□ -1.09
USP35-203ENST00000529308 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
USP35-203ENST00000529308 XP32Q5T750 250 aa8.17□□□□□ -1.1
USP35-203ENST00000529308 LUZP6Q538Z0 58 aa8.15□□□□□ -1.11
USP35-203ENST00000529308 DNAH10Q8IVF4 4471 aa8.04□□□□□ -1.12
USP35-203ENST00000529308 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
USP35-203ENST00000529308 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
USP35-203ENST00000529308 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
USP35-203ENST00000529308 NDUFAF8A1L188 74 aa8□□□□□ -1.13
USP35-203ENST00000529308 H0YAA0 97 aa8□□□□□ -1.13
USP35-203ENST00000529308 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
USP35-203ENST00000529308 ANK2Q01484 3957 aa7.94□□□□□ -1.14
USP35-203ENST00000529308 P0C880 135 aa7.94□□□□□ -1.14
USP35-203ENST00000529308 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
USP35-203ENST00000529308 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
USP35-203ENST00000529308 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
USP35-203ENST00000529308 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
USP35-203ENST00000529308 DNHD1Q96M86 4753 aa7.91□□□□□ -1.14
USP35-203ENST00000529308 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
USP35-203ENST00000529308 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
USP35-203ENST00000529308 LYSTQ99698 3801 aa7.77□□□□□ -1.16
USP35-203ENST00000529308 KRTAP3-1Q9BYR8 98 aa7.75□□□□□ -1.17
USP35-203ENST00000529308 DNAH9Q9NYC9 4486 aa7.73□□□□□ -1.17
USP35-203ENST00000529308 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
USP35-203ENST00000529308 DNAH1Q9P2D7 4330 aa7.64□□□□□ -1.19
USP35-203ENST00000529308 TNP1P09430 55 aa7.63□□□□□ -1.19
USP35-203ENST00000529308 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
USP35-203ENST00000529308 STARD9Q9P2P6 4700 aa7.56□□□□□ -1.2
USP35-203ENST00000529308 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
USP35-203ENST00000529308 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
USP35-203ENST00000529308 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
USP35-203ENST00000529308 FAT1Q14517 4588 aa7.52□□□□□ -1.21
USP35-203ENST00000529308 FRAS1Q86XX4 4008 aa7.51□□□□□ -1.21
USP35-203ENST00000529308 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
USP35-203ENST00000529308 CMYA5Q8N3K9 4069 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms