RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 HSD52Q0P140 79 aa3.73□□□□□ -1.81
ITGB1-218ENST00000528877 PYY3Q5JQD4 70 aa3.73□□□□□ -1.81
ITGB1-218ENST00000528877 TEN1Q86WV5 123 aa3.73□□□□□ -1.81
ITGB1-218ENST00000528877 LST1O00453 97 aa3.72□□□□□ -1.81
ITGB1-218ENST00000528877 H3BQ85 93 aa3.71□□□□□ -1.82
ITGB1-218ENST00000528877 OBSCN-AS1Q96MR7 158 aa3.71□□□□□ -1.82
ITGB1-218ENST00000528877 Q96NJ1 140 aa3.71□□□□□ -1.82
ITGB1-218ENST00000528877 H3BMG7 143 aa3.7□□□□□ -1.82
ITGB1-218ENST00000528877 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
ITGB1-218ENST00000528877 A0A087WSZ3 146 aa3.69□□□□□ -1.82
ITGB1-218ENST00000528877 K7ERJ3 54 aa3.69□□□□□ -1.82
ITGB1-218ENST00000528877 DNAL4O96015 105 aa3.69□□□□□ -1.82
ITGB1-218ENST00000528877 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
ITGB1-218ENST00000528877 TRBV7-4A0A0J9YYF1 115 aa3.68□□□□□ -1.82
ITGB1-218ENST00000528877 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
ITGB1-218ENST00000528877 A8MUU9 505 aa3.68□□□□□ -1.82
ITGB1-218ENST00000528877 FABP2P12104 132 aa3.68□□□□□ -1.82
ITGB1-218ENST00000528877 UQCR10Q9UDW1 63 aa3.68□□□□□ -1.82
ITGB1-218ENST00000528877 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
ITGB1-218ENST00000528877 TRACP01848 142 aa3.67□□□□□ -1.82
ITGB1-218ENST00000528877 COX6CP09669 75 aa3.67□□□□□ -1.82
ITGB1-218ENST00000528877 ATP11AUNQ6ZP68 121 aa3.67□□□□□ -1.82
ITGB1-218ENST00000528877 PSMB2P49721 201 aa3.66□□□□□ -1.82
ITGB1-218ENST00000528877 UBE2V1Q13404 147 aa3.65□□□□□ -1.83
ITGB1-218ENST00000528877 COX6B2Q6YFQ2 88 aa3.65□□□□□ -1.83
ITGB1-218ENST00000528877 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
ITGB1-218ENST00000528877 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
ITGB1-218ENST00000528877 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
ITGB1-218ENST00000528877 CCKP06307 115 aa3.63□□□□□ -1.83
ITGB1-218ENST00000528877 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
ITGB1-218ENST00000528877 DSCR10P59022 87 aa3.62□□□□□ -1.83
ITGB1-218ENST00000528877 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
ITGB1-218ENST00000528877 A0A1B0GV72 72 aa3.6□□□□□ -1.83
ITGB1-218ENST00000528877 M0R143 59 aa3.6□□□□□ -1.83
ITGB1-218ENST00000528877 M0R2T5 61 aa3.6□□□□□ -1.83
ITGB1-218ENST00000528877 LINC00313P59037 77 aa3.6□□□□□ -1.83
ITGB1-218ENST00000528877 RBM3P98179 157 aaKnown RBP3.6□□□□□ -1.83
ITGB1-218ENST00000528877 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
ITGB1-218ENST00000528877 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
ITGB1-218ENST00000528877 A0A1B0GW54 56 aa3.58□□□□□ -1.84
ITGB1-218ENST00000528877 C8orf87E5RJ46 101 aa3.58□□□□□ -1.84
ITGB1-218ENST00000528877 J3KT08 172 aa3.58□□□□□ -1.84
ITGB1-218ENST00000528877 SCGB1C2P0DMR2 95 aa3.58□□□□□ -1.84
ITGB1-218ENST00000528877 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
ITGB1-218ENST00000528877 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 LOC110117498A0A087WWA1 95 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 C9JAW5 83 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 ATXN8Q156A1 80 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 Q6ZQT0 140 aa3.57□□□□□ -1.84
ITGB1-218ENST00000528877 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
ITGB1-218ENST00000528877 JMJD7-PLA2G4BH0Y9G9 81 aa3.56□□□□□ -1.84
ITGB1-218ENST00000528877 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
ITGB1-218ENST00000528877 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
ITGB1-218ENST00000528877 HRES1P13985 223 aa3.55□□□□□ -1.84
ITGB1-218ENST00000528877 PDE6GP18545 87 aa3.55□□□□□ -1.84
ITGB1-218ENST00000528877 LYRM7Q5U5X0 104 aa3.55□□□□□ -1.84
ITGB1-218ENST00000528877 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
ITGB1-218ENST00000528877 A8MWP4 228 aa3.53□□□□□ -1.84
ITGB1-218ENST00000528877 TSTD3H0UI37 97 aa3.52□□□□□ -1.85
ITGB1-218ENST00000528877 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
ITGB1-218ENST00000528877 NAA38Q9BRA0 125 aaKnown RBP3.52□□□□□ -1.85
ITGB1-218ENST00000528877 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
ITGB1-218ENST00000528877 NDUFB1O75438 58 aa3.51□□□□□ -1.85
ITGB1-218ENST00000528877 USH2AO75445 5202 aa3.51□□□□□ -1.85
ITGB1-218ENST00000528877 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
ITGB1-218ENST00000528877 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
ITGB1-218ENST00000528877 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
ITGB1-218ENST00000528877 C14orf132Q9NPU4 83 aa3.5□□□□□ -1.85
ITGB1-218ENST00000528877 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
ITGB1-218ENST00000528877 FAM236DA0A1B0GTK5 79 aa3.49□□□□□ -1.85
ITGB1-218ENST00000528877 H3BT86 120 aa3.49□□□□□ -1.85
ITGB1-218ENST00000528877 MT2AP02795 61 aa3.49□□□□□ -1.85
ITGB1-218ENST00000528877 FAM236CP0DP71 79 aa3.49□□□□□ -1.85
ITGB1-218ENST00000528877 PRR15Q8IV56 129 aa3.48□□□□□ -1.85
ITGB1-218ENST00000528877 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
ITGB1-218ENST00000528877 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 A0A1W2PPM0 123 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 SPINK7P58062 85 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 Q6ZVQ6 151 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 MTURNQ8N3F0 131 aa3.47□□□□□ -1.85
ITGB1-218ENST00000528877 LOC105371267A0A1B0GV96 52 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 MT1FP04733 61 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 BATFQ16520 125 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 NREPQ16612 68 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
ITGB1-218ENST00000528877 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
ITGB1-218ENST00000528877 K7EQZ3 153 aa3.44□□□□□ -1.86
ITGB1-218ENST00000528877 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
ITGB1-218ENST00000528877 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ITGB1-218ENST00000528877 WFDC13Q8IUB5 93 aa3.43□□□□□ -1.86
ITGB1-218ENST00000528877 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
ITGB1-218ENST00000528877 BPY2O14599 106 aa3.4□□□□□ -1.87
ITGB1-218ENST00000528877 KRTAP10-10P60014 251 aa3.4□□□□□ -1.87
ITGB1-218ENST00000528877 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
ITGB1-218ENST00000528877 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms