RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 LCE2BO14633 110 aa5.27□□□□□ -1.57
CHD7-208ENST00000528280 CCKP06307 115 aa5.27□□□□□ -1.57
CHD7-208ENST00000528280 C1orf195Q5TG92 126 aa5.27□□□□□ -1.57
CHD7-208ENST00000528280 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
CHD7-208ENST00000528280 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
CHD7-208ENST00000528280 C14orf132Q9NPU4 83 aa5.25□□□□□ -1.57
CHD7-208ENST00000528280 C9orf92A6NGG3 77 aa5.24□□□□□ -1.57
CHD7-208ENST00000528280 A0A0G2JQZ4 141 aa5.23□□□□□ -1.57
CHD7-208ENST00000528280 RBM3P98179 157 aaKnown RBP5.23□□□□□ -1.57
CHD7-208ENST00000528280 IGFL1Q6UW32 110 aa5.22□□□□□ -1.57
CHD7-208ENST00000528280 UQCRQO14949 82 aa5.21□□□□□ -1.58
CHD7-208ENST00000528280 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
CHD7-208ENST00000528280 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
CHD7-208ENST00000528280 LINC00846Q9NV44 126 aa5.21□□□□□ -1.58
CHD7-208ENST00000528280 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
CHD7-208ENST00000528280 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
CHD7-208ENST00000528280 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
CHD7-208ENST00000528280 Q6ZQT0 140 aa5.2□□□□□ -1.58
CHD7-208ENST00000528280 DSCR8Q96T75 97 aa5.2□□□□□ -1.58
CHD7-208ENST00000528280 SS18L2Q9UHA2 77 aa5.2□□□□□ -1.58
CHD7-208ENST00000528280 A0A1B0GW54 56 aa5.19□□□□□ -1.58
CHD7-208ENST00000528280 ATOX1O00244 68 aa5.19□□□□□ -1.58
CHD7-208ENST00000528280 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
CHD7-208ENST00000528280 TRBV7-4A0A0J9YYF1 115 aa5.18□□□□□ -1.58
CHD7-208ENST00000528280 FAM236AA0A1B0GUQ0 79 aa5.18□□□□□ -1.58
CHD7-208ENST00000528280 FAM236BA0A1B0GV22 79 aa5.18□□□□□ -1.58
CHD7-208ENST00000528280 CCDC179H3BU77 68 aa5.17□□□□□ -1.58
CHD7-208ENST00000528280 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
CHD7-208ENST00000528280 COX7CP15954 63 aa5.15□□□□□ -1.59
CHD7-208ENST00000528280 CXCL6P80162 114 aa5.15□□□□□ -1.59
CHD7-208ENST00000528280 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
CHD7-208ENST00000528280 IGKV3D-7A0A0C4DH55 119 aa5.12□□□□□ -1.59
CHD7-208ENST00000528280 Q75L30 129 aa5.12□□□□□ -1.59
CHD7-208ENST00000528280 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
CHD7-208ENST00000528280 TMEM258P61165 79 aa5.11□□□□□ -1.59
CHD7-208ENST00000528280 Q6ZVQ6 151 aa5.11□□□□□ -1.59
CHD7-208ENST00000528280 A0A087WSZ3 146 aa5.1□□□□□ -1.59
CHD7-208ENST00000528280 J3KT08 172 aa5.1□□□□□ -1.59
CHD7-208ENST00000528280 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
CHD7-208ENST00000528280 Q96NJ1 140 aa5.1□□□□□ -1.59
CHD7-208ENST00000528280 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
CHD7-208ENST00000528280 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
CHD7-208ENST00000528280 A0A1W2PNM2 257 aa5.06□□□□□ -1.6
CHD7-208ENST00000528280 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
CHD7-208ENST00000528280 A0A087WVE0 104 aa5.05□□□□□ -1.6
CHD7-208ENST00000528280 NREPQ16612 68 aa5.05□□□□□ -1.6
CHD7-208ENST00000528280 C20orf166-AS1Q96NR2 134 aa5.05□□□□□ -1.6
CHD7-208ENST00000528280 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 A8MUU9 505 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 IGKV4-1P06312 121 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 LINC00313P59037 77 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 MT1HP80294 61 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 C5orf47Q569G3 176 aa5.04□□□□□ -1.6
CHD7-208ENST00000528280 M0R2T5 61 aa5.03□□□□□ -1.6
CHD7-208ENST00000528280 BPY2O14599 106 aa5.01□□□□□ -1.61
CHD7-208ENST00000528280 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
CHD7-208ENST00000528280 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
CHD7-208ENST00000528280 NDUFC1O43677 76 aa4.99□□□□□ -1.61
CHD7-208ENST00000528280 DSCR10P59022 87 aa4.99□□□□□ -1.61
CHD7-208ENST00000528280 ATP5EP56381 51 aaPredicted RBP4.98□□□□□ -1.61
CHD7-208ENST00000528280 KLKP1Q107X0 134 aa4.98□□□□□ -1.61
CHD7-208ENST00000528280 C8orf87E5RJ46 101 aa4.97□□□□□ -1.61
CHD7-208ENST00000528280 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
CHD7-208ENST00000528280 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
CHD7-208ENST00000528280 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
CHD7-208ENST00000528280 NDUFB1O75438 58 aa4.95□□□□□ -1.62
CHD7-208ENST00000528280 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
CHD7-208ENST00000528280 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
CHD7-208ENST00000528280 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
CHD7-208ENST00000528280 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
CHD7-208ENST00000528280 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
CHD7-208ENST00000528280 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
CHD7-208ENST00000528280 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
CHD7-208ENST00000528280 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
CHD7-208ENST00000528280 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
CHD7-208ENST00000528280 FAM236DA0A1B0GTK5 79 aa4.9□□□□□ -1.63
CHD7-208ENST00000528280 H7BZZ5 65 aa4.9□□□□□ -1.63
CHD7-208ENST00000528280 FAM236CP0DP71 79 aa4.9□□□□□ -1.63
CHD7-208ENST00000528280 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
CHD7-208ENST00000528280 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
CHD7-208ENST00000528280 Q8N9L7 120 aa4.88□□□□□ -1.63
CHD7-208ENST00000528280 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
CHD7-208ENST00000528280 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
CHD7-208ENST00000528280 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
CHD7-208ENST00000528280 A8MWP4 228 aa4.87□□□□□ -1.63
CHD7-208ENST00000528280 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
CHD7-208ENST00000528280 K7EQZ3 153 aa4.86□□□□□ -1.63
CHD7-208ENST00000528280 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
CHD7-208ENST00000528280 ZCCHC13Q8WW36 166 aaKnown RBP4.86□□□□□ -1.63
CHD7-208ENST00000528280 USH2AO75445 5202 aa4.86□□□□□ -1.63
CHD7-208ENST00000528280 H3BPC8 53 aa4.84□□□□□ -1.63
CHD7-208ENST00000528280 PRR15Q8IV56 129 aa4.84□□□□□ -1.63
CHD7-208ENST00000528280 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
CHD7-208ENST00000528280 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
CHD7-208ENST00000528280 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
CHD7-208ENST00000528280 HRES1P13985 223 aa4.82□□□□□ -1.64
CHD7-208ENST00000528280 SPINK7P58062 85 aa4.82□□□□□ -1.64
CHD7-208ENST00000528280 SNURFQ9Y675 71 aa4.82□□□□□ -1.64
CHD7-208ENST00000528280 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
CHD7-208ENST00000528280 MP68P56378 58 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms