RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.065e-6■■■■□ 22.8
NXF1-205ENST00000527497 LINC01549A6NIU2 74 aa2.16□□□□□ -2.06
NXF1-205ENST00000527497 ROS1P08922 2347 aa2.16□□□□□ -2.06
NXF1-205ENST00000527497 DEFB133Q30KQ1 61 aa2.15□□□□□ -2.07
NXF1-205ENST00000527497 CADP27708 2225 aa2.15□□□□□ -2.07
NXF1-205ENST00000527497 WNK1Q9H4A3 2382 aa2.15□□□□□ -2.07
NXF1-205ENST00000527497 COX7BP24311 80 aa2.14□□□□□ -2.07
NXF1-205ENST00000527497 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
NXF1-205ENST00000527497 RYR1P21817 5038 aa2.12□□□□□ -2.07
NXF1-205ENST00000527497 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
NXF1-205ENST00000527497 RYR3Q15413 4870 aa2.12□□□□□ -2.07
NXF1-205ENST00000527497 SPTY2D1-AS1A0A0U1RR47 76 aa2.11□□□□□ -2.07
NXF1-205ENST00000527497 ARL14EPLP0DKL9 152 aa2.11□□□□□ -2.07
NXF1-205ENST00000527497 RPL38P63173 70 aaKnown RBP2.11□□□□□ -2.07
NXF1-205ENST00000527497 PCLOQ9Y6V0 5065 aa2.11□□□□□ -2.07
NXF1-205ENST00000527497 PLCE1Q9P212 2302 aa2.11□□□□□ -2.07
NXF1-205ENST00000527497 VWFP04275 2813 aa2.1□□□□□ -2.07
NXF1-205ENST00000527497 DNAH3Q8TD57 4116 aa2.1□□□□□ -2.07
NXF1-205ENST00000527497 DEFB109BQ30KR1 87 aa2.1□□□□□ -2.07
NXF1-205ENST00000527497 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
NXF1-205ENST00000527497 USF3Q68DE3 2245 aa2.1□□□□□ -2.07
NXF1-205ENST00000527497 UBL5Q9BZL1 73 aa2.09□□□□□ -2.07
NXF1-205ENST00000527497 SNRPGP15A8MWD9 76 aa2.08□□□□□ -2.08
NXF1-205ENST00000527497 NDUFA4O00483 81 aa2.08□□□□□ -2.08
NXF1-205ENST00000527497 DEFB106AQ8N104 65 aa2.08□□□□□ -2.08
NXF1-205ENST00000527497 FXYD6Q9H0Q3 95 aa2.08□□□□□ -2.08
NXF1-205ENST00000527497 TENM3Q9P273 2699 aa2.06□□□□□ -2.08
NXF1-205ENST00000527497 CPSF4LA6NMK7 179 aaKnown RBP2.06□□□□□ -2.08
NXF1-205ENST00000527497 SPINK9Q5DT21 86 aa2.06□□□□□ -2.08
NXF1-205ENST00000527497 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
NXF1-205ENST00000527497 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
NXF1-205ENST00000527497 UBR4Q5T4S7 5183 aa2.05□□□□□ -2.08
NXF1-205ENST00000527497 LYSTQ99698 3801 aa2.05□□□□□ -2.08
NXF1-205ENST00000527497 BIRC6Q9NR09 4857 aa2.05□□□□□ -2.08
NXF1-205ENST00000527497 COL7A1Q02388 2944 aa2.04□□□□□ -2.08
NXF1-205ENST00000527497 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
NXF1-205ENST00000527497 SMR3AQ99954 134 aa2.04□□□□□ -2.08
NXF1-205ENST00000527497 WNK2Q9Y3S1 2297 aa2.04□□□□□ -2.08
NXF1-205ENST00000527497 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.08
NXF1-205ENST00000527497 DEFB110Q30KQ9 67 aa2.03□□□□□ -2.08
NXF1-205ENST00000527497 COX14Q96I36 57 aa2.03□□□□□ -2.08
NXF1-205ENST00000527497 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
NXF1-205ENST00000527497 RYR2Q92736 4967 aa2.02□□□□□ -2.09
NXF1-205ENST00000527497 CSMD3Q7Z407 3707 aa2.02□□□□□ -2.09
NXF1-205ENST00000527497 FCER1GP30273 86 aa2.02□□□□□ -2.09
NXF1-205ENST00000527497 SACSQ9NZJ4 4579 aa2.02□□□□□ -2.09
NXF1-205ENST00000527497 COX6B1P14854 86 aa2.01□□□□□ -2.09
NXF1-205ENST00000527497 KRTAP10-4P60372 401 aaPredicted RBP2.01□□□□□ -2.09
NXF1-205ENST00000527497 TP53AIP1Q9HCN2 124 aa2.01□□□□□ -2.09
NXF1-205ENST00000527497 CRIPTQ9P021 101 aa2.01□□□□□ -2.09
NXF1-205ENST00000527497 DNAH9Q9NYC9 4486 aa2□□□□□ -2.09
NXF1-205ENST00000527497 TFF3Q07654 80 aa2□□□□□ -2.09
NXF1-205ENST00000527497 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
NXF1-205ENST00000527497 TENM2Q9NT68 2774 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 I3L2K1 104 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 CCL22O00626 93 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 PIGYQ3MUY2 71 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 NCBP2-AS2Q69YL0 99 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 USMG5Q96IX5 58 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 HECTD4Q9Y4D8 3996 aa1.99□□□□□ -2.09
NXF1-205ENST00000527497 STATHP02808 62 aa1.98□□□□□ -2.09
NXF1-205ENST00000527497 KCNQ1DNQ9H478 68 aa1.98□□□□□ -2.09
NXF1-205ENST00000527497 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
NXF1-205ENST00000527497 DEFB114Q30KQ6 69 aa1.97□□□□□ -2.09
NXF1-205ENST00000527497 CNFNQ9BYD5 112 aa1.97□□□□□ -2.09
NXF1-205ENST00000527497 PLECQ15149 4684 aaKnown RBP1.97□□□□□ -2.09
NXF1-205ENST00000527497 I3L3M4 83 aa1.96□□□□□ -2.1
NXF1-205ENST00000527497 NMES1Q9C002 83 aa1.96□□□□□ -2.1
NXF1-205ENST00000527497 DNAH1Q9P2D7 4330 aa1.96□□□□□ -2.1
NXF1-205ENST00000527497 K7EQZ3 153 aa1.94□□□□□ -2.1
NXF1-205ENST00000527497 MRPL33O75394 65 aaKnown RBP1.94□□□□□ -2.1
NXF1-205ENST00000527497 SERF2P84101 59 aa1.94□□□□□ -2.1
NXF1-205ENST00000527497 HERC2O95714 4834 aa1.93□□□□□ -2.1
NXF1-205ENST00000527497 ETDCA0A1B0GVM5 59 aa1.93□□□□□ -2.1
NXF1-205ENST00000527497 H0YGG7 62 aa1.93□□□□□ -2.1
NXF1-205ENST00000527497 K7EMI3 77 aa1.93□□□□□ -2.1
NXF1-205ENST00000527497 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
NXF1-205ENST00000527497 HUWE1Q7Z6Z7 4374 aaKnown RBP1.93□□□□□ -2.1
NXF1-205ENST00000527497 ALMS1Q8TCU4 4167 aa1.92□□□□□ -2.1
NXF1-205ENST00000527497 TNCP24821 2201 aa1.92□□□□□ -2.1
NXF1-205ENST00000527497 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
NXF1-205ENST00000527497 A0A0D9SG42 100 aa1.91□□□□□ -2.1
NXF1-205ENST00000527497 DEFB108AA8MXU0 73 aa1.91□□□□□ -2.1
NXF1-205ENST00000527497 DNAH10Q8IVF4 4471 aa1.91□□□□□ -2.1
NXF1-205ENST00000527497 KMT2AQ03164 3969 aa1.91□□□□□ -2.1
NXF1-205ENST00000527497 COX6A2Q02221 97 aa1.9□□□□□ -2.11
NXF1-205ENST00000527497 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
NXF1-205ENST00000527497 PKHD1P08F94 4074 aa1.9□□□□□ -2.11
NXF1-205ENST00000527497 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 M0R1W7 72 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 CMC2Q9NRP2 79 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 PRO0255Q9UI72 69 aa1.89□□□□□ -2.11
NXF1-205ENST00000527497 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
NXF1-205ENST00000527497 PRH1P02810 166 aa1.88□□□□□ -2.11
NXF1-205ENST00000527497 COX6B2Q6YFQ2 88 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms