RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 UBL5Q9BZL1 73 aa7.24□□□□□ -1.25
CAPN1-207ENST00000527189 LINC00643Q86TS7 51 aa7.23□□□□□ -1.25
CAPN1-207ENST00000527189 SCGB1A1P11684 91 aa7.21□□□□□ -1.26
CAPN1-207ENST00000527189 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
CAPN1-207ENST00000527189 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
CAPN1-207ENST00000527189 Q6ZQT0 140 aa7.21□□□□□ -1.26
CAPN1-207ENST00000527189 A0A1B0GW54 56 aa7.2□□□□□ -1.26
CAPN1-207ENST00000527189 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
CAPN1-207ENST00000527189 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
CAPN1-207ENST00000527189 TRBV7-4A0A0J9YYF1 115 aa7.18□□□□□ -1.26
CAPN1-207ENST00000527189 TRBV7-7A0A0K0K1E9 115 aa7.18□□□□□ -1.26
CAPN1-207ENST00000527189 IGFL1Q6UW32 110 aa7.18□□□□□ -1.26
CAPN1-207ENST00000527189 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
CAPN1-207ENST00000527189 Q6Q795 121 aa7.16□□□□□ -1.26
CAPN1-207ENST00000527189 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
CAPN1-207ENST00000527189 MT-ATP8P03928 68 aa7.15□□□□□ -1.26
CAPN1-207ENST00000527189 MT1HP80294 61 aa7.13□□□□□ -1.27
CAPN1-207ENST00000527189 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
CAPN1-207ENST00000527189 NREPQ16612 68 aa7.1□□□□□ -1.27
CAPN1-207ENST00000527189 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
CAPN1-207ENST00000527189 Q6ZVQ6 151 aa7.08□□□□□ -1.28
CAPN1-207ENST00000527189 Q75L30 129 aa7.08□□□□□ -1.28
CAPN1-207ENST00000527189 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
CAPN1-207ENST00000527189 CXCL6P80162 114 aa7.07□□□□□ -1.28
CAPN1-207ENST00000527189 IGKV3D-7A0A0C4DH55 119 aa7.06□□□□□ -1.28
CAPN1-207ENST00000527189 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
CAPN1-207ENST00000527189 BPY2O14599 106 aa7.04□□□□□ -1.28
CAPN1-207ENST00000527189 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
CAPN1-207ENST00000527189 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
CAPN1-207ENST00000527189 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
CAPN1-207ENST00000527189 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
CAPN1-207ENST00000527189 FAM236AA0A1B0GUQ0 79 aa7.01□□□□□ -1.29
CAPN1-207ENST00000527189 FAM236BA0A1B0GV22 79 aa7.01□□□□□ -1.29
CAPN1-207ENST00000527189 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
CAPN1-207ENST00000527189 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
CAPN1-207ENST00000527189 Q96NJ1 140 aa7.01□□□□□ -1.29
CAPN1-207ENST00000527189 M0R2T5 61 aa7□□□□□ -1.29
CAPN1-207ENST00000527189 ATOX1O00244 68 aa7□□□□□ -1.29
CAPN1-207ENST00000527189 A0A087WSZ3 146 aa6.99□□□□□ -1.29
CAPN1-207ENST00000527189 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
CAPN1-207ENST00000527189 USH2AO75445 5202 aa6.97□□□□□ -1.29
CAPN1-207ENST00000527189 A8MUU9 505 aa6.96□□□□□ -1.3
CAPN1-207ENST00000527189 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
CAPN1-207ENST00000527189 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.3
CAPN1-207ENST00000527189 J3KT08 172 aa6.95□□□□□ -1.3
CAPN1-207ENST00000527189 NDUFB1O75438 58 aa6.92□□□□□ -1.3
CAPN1-207ENST00000527189 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
CAPN1-207ENST00000527189 A0A087WVE0 104 aa6.9□□□□□ -1.3
CAPN1-207ENST00000527189 LINC00313P59037 77 aa6.9□□□□□ -1.3
CAPN1-207ENST00000527189 DSCR10P59022 87 aa6.89□□□□□ -1.31
CAPN1-207ENST00000527189 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
CAPN1-207ENST00000527189 SERP2Q8N6R1 65 aa6.86□□□□□ -1.31
CAPN1-207ENST00000527189 LINC00472Q9H8W2 130 aa6.86□□□□□ -1.31
CAPN1-207ENST00000527189 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
CAPN1-207ENST00000527189 UQCRQO14949 82 aa6.85□□□□□ -1.31
CAPN1-207ENST00000527189 A8MWP4 228 aa6.84□□□□□ -1.31
CAPN1-207ENST00000527189 KRTAP16-1A8MUX0 517 aa6.83□□□□□ -1.32
CAPN1-207ENST00000527189 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
CAPN1-207ENST00000527189 COX7CP15954 63 aa6.83□□□□□ -1.32
CAPN1-207ENST00000527189 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
CAPN1-207ENST00000527189 Q8N9L7 120 aa6.82□□□□□ -1.32
CAPN1-207ENST00000527189 K7EQZ3 153 aa6.81□□□□□ -1.32
CAPN1-207ENST00000527189 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
CAPN1-207ENST00000527189 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
CAPN1-207ENST00000527189 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
CAPN1-207ENST00000527189 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
CAPN1-207ENST00000527189 IGHV6-1A0A0B4J1U7 121 aa6.78□□□□□ -1.32
CAPN1-207ENST00000527189 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
CAPN1-207ENST00000527189 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
CAPN1-207ENST00000527189 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
CAPN1-207ENST00000527189 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
CAPN1-207ENST00000527189 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
CAPN1-207ENST00000527189 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
CAPN1-207ENST00000527189 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
CAPN1-207ENST00000527189 MPLKIPQ8TAP9 179 aa6.74□□□□□ -1.33
CAPN1-207ENST00000527189 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
CAPN1-207ENST00000527189 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
CAPN1-207ENST00000527189 HRES1P13985 223 aa6.72□□□□□ -1.33
CAPN1-207ENST00000527189 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
CAPN1-207ENST00000527189 MP68P56378 58 aa6.71□□□□□ -1.34
CAPN1-207ENST00000527189 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
CAPN1-207ENST00000527189 NDUFC1O43677 76 aa6.69□□□□□ -1.34
CAPN1-207ENST00000527189 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
CAPN1-207ENST00000527189 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
CAPN1-207ENST00000527189 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
CAPN1-207ENST00000527189 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
CAPN1-207ENST00000527189 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
CAPN1-207ENST00000527189 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
CAPN1-207ENST00000527189 NDUFS5O43920 106 aa6.67□□□□□ -1.34
CAPN1-207ENST00000527189 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
CAPN1-207ENST00000527189 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
CAPN1-207ENST00000527189 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
CAPN1-207ENST00000527189 H3BPC8 53 aa6.65□□□□□ -1.34
CAPN1-207ENST00000527189 TMEM258P61165 79 aa6.64□□□□□ -1.35
CAPN1-207ENST00000527189 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
CAPN1-207ENST00000527189 SPINK7P58062 85 aa6.63□□□□□ -1.35
CAPN1-207ENST00000527189 MT2AP02795 61 aa6.62□□□□□ -1.35
CAPN1-207ENST00000527189 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
CAPN1-207ENST00000527189 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
CAPN1-207ENST00000527189 H0Y9P7 68 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms