RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 DSCR8Q96T75 97 aa8.23□□□□□ -1.09
PTPRU-210ENST00000527027 PDE6GP18545 87 aa8.22□□□□□ -1.09
PTPRU-210ENST00000527027 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.09
PTPRU-210ENST00000527027 A0A1B0GV90 55 aa8.18□□□□□ -1.1
PTPRU-210ENST00000527027 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
PTPRU-210ENST00000527027 PRO0461Q9UI25 63 aa8.18□□□□□ -1.1
PTPRU-210ENST00000527027 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
PTPRU-210ENST00000527027 MTURNQ8N3F0 131 aa8.17□□□□□ -1.1
PTPRU-210ENST00000527027 TRBV7-4A0A0J9YYF1 115 aa8.16□□□□□ -1.1
PTPRU-210ENST00000527027 A8MUU9 505 aa8.16□□□□□ -1.1
PTPRU-210ENST00000527027 LOC110117498A0A087WWA1 95 aa8.15□□□□□ -1.1
PTPRU-210ENST00000527027 A0A1B0GW54 56 aa8.15□□□□□ -1.1
PTPRU-210ENST00000527027 MT2AP02795 61 aa8.14□□□□□ -1.11
PTPRU-210ENST00000527027 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
PTPRU-210ENST00000527027 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
PTPRU-210ENST00000527027 A0A1B0GV72 72 aa8.12□□□□□ -1.11
PTPRU-210ENST00000527027 CCKP06307 115 aa8.12□□□□□ -1.11
PTPRU-210ENST00000527027 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
PTPRU-210ENST00000527027 LCE2BO14633 110 aa8.1□□□□□ -1.11
PTPRU-210ENST00000527027 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
PTPRU-210ENST00000527027 Q6ZQT0 140 aa8.09□□□□□ -1.11
PTPRU-210ENST00000527027 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
PTPRU-210ENST00000527027 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
PTPRU-210ENST00000527027 MT1FP04733 61 aa8.07□□□□□ -1.12
PTPRU-210ENST00000527027 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
PTPRU-210ENST00000527027 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
PTPRU-210ENST00000527027 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
PTPRU-210ENST00000527027 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
PTPRU-210ENST00000527027 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
PTPRU-210ENST00000527027 A0A087WSZ3 146 aa8.04□□□□□ -1.12
PTPRU-210ENST00000527027 KRTAP16-1A8MUX0 517 aa8.04□□□□□ -1.12
PTPRU-210ENST00000527027 DSCR10P59022 87 aa8.04□□□□□ -1.12
PTPRU-210ENST00000527027 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
PTPRU-210ENST00000527027 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
PTPRU-210ENST00000527027 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
PTPRU-210ENST00000527027 LINC00313P59037 77 aa7.98□□□□□ -1.13
PTPRU-210ENST00000527027 J3QR89 54 aa7.97□□□□□ -1.13
PTPRU-210ENST00000527027 ACYP1P07311 99 aa7.97□□□□□ -1.13
PTPRU-210ENST00000527027 HRES1P13985 223 aa7.97□□□□□ -1.13
PTPRU-210ENST00000527027 MACF1Q9UPN3 7388 aaKnown RBP7.95□□□□□ -1.14
PTPRU-210ENST00000527027 J3KT08 172 aa7.95□□□□□ -1.14
PTPRU-210ENST00000527027 NREPQ16612 68 aa7.95□□□□□ -1.14
PTPRU-210ENST00000527027 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
PTPRU-210ENST00000527027 UBL5Q9BZL1 73 aa7.94□□□□□ -1.14
PTPRU-210ENST00000527027 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
PTPRU-210ENST00000527027 FAM240AA0A1B0GVK7 77 aa7.93□□□□□ -1.14
PTPRU-210ENST00000527027 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
PTPRU-210ENST00000527027 LINC00472Q9H8W2 130 aa7.91□□□□□ -1.14
PTPRU-210ENST00000527027 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
PTPRU-210ENST00000527027 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
PTPRU-210ENST00000527027 NDUFB1O75438 58 aa7.87□□□□□ -1.15
PTPRU-210ENST00000527027 Q6ZVQ6 151 aa7.87□□□□□ -1.15
PTPRU-210ENST00000527027 BPY2O14599 106 aa7.85□□□□□ -1.15
PTPRU-210ENST00000527027 K7ERU9 68 aa7.84□□□□□ -1.15
PTPRU-210ENST00000527027 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
PTPRU-210ENST00000527027 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
PTPRU-210ENST00000527027 A8MWP4 228 aa7.81□□□□□ -1.16
PTPRU-210ENST00000527027 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
PTPRU-210ENST00000527027 CXCL6P80162 114 aa7.79□□□□□ -1.16
PTPRU-210ENST00000527027 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
PTPRU-210ENST00000527027 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
PTPRU-210ENST00000527027 LINC00643Q86TS7 51 aa7.77□□□□□ -1.17
PTPRU-210ENST00000527027 PRR15Q8IV56 129 aa7.76□□□□□ -1.17
PTPRU-210ENST00000527027 SPINK7P58062 85 aa7.75□□□□□ -1.17
PTPRU-210ENST00000527027 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
PTPRU-210ENST00000527027 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
PTPRU-210ENST00000527027 IGKV3D-7A0A0C4DH55 119 aa7.73□□□□□ -1.17
PTPRU-210ENST00000527027 K7EQZ3 153 aa7.7□□□□□ -1.18
PTPRU-210ENST00000527027 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
PTPRU-210ENST00000527027 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
PTPRU-210ENST00000527027 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.18
PTPRU-210ENST00000527027 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
PTPRU-210ENST00000527027 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
PTPRU-210ENST00000527027 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
PTPRU-210ENST00000527027 Q8N9L7 120 aa7.63□□□□□ -1.19
PTPRU-210ENST00000527027 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
PTPRU-210ENST00000527027 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
PTPRU-210ENST00000527027 CASC2Q6XLA1 102 aa7.62□□□□□ -1.19
PTPRU-210ENST00000527027 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
PTPRU-210ENST00000527027 IMUPQ9GZP8 106 aa7.6□□□□□ -1.19
PTPRU-210ENST00000527027 NDUFS5O43920 106 aa7.54□□□□□ -1.2
PTPRU-210ENST00000527027 NEBP20929 6669 aa7.53□□□□□ -1.2
PTPRU-210ENST00000527027 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
PTPRU-210ENST00000527027 TP53AIP1Q9HCN2 124 aa7.52□□□□□ -1.21
PTPRU-210ENST00000527027 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
PTPRU-210ENST00000527027 A0A087WVE0 104 aa7.48□□□□□ -1.21
PTPRU-210ENST00000527027 SCGB1A1P11684 91 aa7.44□□□□□ -1.22
PTPRU-210ENST00000527027 UQCRQO14949 82 aa7.42□□□□□ -1.22
PTPRU-210ENST00000527027 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
PTPRU-210ENST00000527027 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.22
PTPRU-210ENST00000527027 A6NN06 94 aa7.38□□□□□ -1.23
PTPRU-210ENST00000527027 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
PTPRU-210ENST00000527027 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
PTPRU-210ENST00000527027 ATOX1O00244 68 aa7.36□□□□□ -1.23
PTPRU-210ENST00000527027 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
PTPRU-210ENST00000527027 KRTAP20-1Q3LI63 56 aa7.34□□□□□ -1.23
PTPRU-210ENST00000527027 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
PTPRU-210ENST00000527027 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
PTPRU-210ENST00000527027 IGKV2-30P06310 120 aa7.33□□□□□ -1.24
PTPRU-210ENST00000527027 C5orf47Q569G3 176 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms