RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 KLKP1Q107X0 134 aa4.45□□□□□ -1.7
CTR9-202ENST00000524523 MOBPQ13875 183 aa4.45□□□□□ -1.7
CTR9-202ENST00000524523 PRR26Q8N8Z3 221 aa4.45□□□□□ -1.7
CTR9-202ENST00000524523 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
CTR9-202ENST00000524523 SRRM2Q9UQ35 2752 aaKnown RBP4.45□□□□□ -1.7
CTR9-202ENST00000524523 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CTR9-202ENST00000524523 K7EQZ3 153 aa4.43□□□□□ -1.7
CTR9-202ENST00000524523 C5orf47Q569G3 176 aa4.43□□□□□ -1.7
CTR9-202ENST00000524523 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
CTR9-202ENST00000524523 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
CTR9-202ENST00000524523 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
CTR9-202ENST00000524523 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
CTR9-202ENST00000524523 Q8N9L7 120 aa4.42□□□□□ -1.7
CTR9-202ENST00000524523 Q96NJ1 140 aa4.42□□□□□ -1.7
CTR9-202ENST00000524523 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
CTR9-202ENST00000524523 H3BPC8 53 aa4.41□□□□□ -1.7
CTR9-202ENST00000524523 KRTAP1-4P0C5Y4 121 aa4.41□□□□□ -1.7
CTR9-202ENST00000524523 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
CTR9-202ENST00000524523 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
CTR9-202ENST00000524523 SPINK1P00995 79 aa4.4□□□□□ -1.71
CTR9-202ENST00000524523 TMEM258P61165 79 aa4.4□□□□□ -1.71
CTR9-202ENST00000524523 LIMD2Q9BT23 127 aa4.4□□□□□ -1.71
CTR9-202ENST00000524523 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
CTR9-202ENST00000524523 CASC2Q6XLA1 102 aa4.39□□□□□ -1.71
CTR9-202ENST00000524523 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
CTR9-202ENST00000524523 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
CTR9-202ENST00000524523 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
CTR9-202ENST00000524523 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
CTR9-202ENST00000524523 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
CTR9-202ENST00000524523 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
CTR9-202ENST00000524523 TMEM254Q8TBM7 123 aa4.38□□□□□ -1.71
CTR9-202ENST00000524523 hDV103S1A0JD37 113 aa4.37□□□□□ -1.71
CTR9-202ENST00000524523 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
CTR9-202ENST00000524523 A0A087X002 238 aa4.36□□□□□ -1.71
CTR9-202ENST00000524523 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
CTR9-202ENST00000524523 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
CTR9-202ENST00000524523 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
CTR9-202ENST00000524523 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
CTR9-202ENST00000524523 H7BZZ5 65 aa4.35□□□□□ -1.71
CTR9-202ENST00000524523 HRCT1Q6UXD1 115 aa4.35□□□□□ -1.71
CTR9-202ENST00000524523 TYMSOSQ8TAI1 123 aa4.35□□□□□ -1.71
CTR9-202ENST00000524523 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
CTR9-202ENST00000524523 MP68P56378 58 aa4.34□□□□□ -1.71
CTR9-202ENST00000524523 KRTAP10-4P60372 401 aaPredicted RBP4.34□□□□□ -1.71
CTR9-202ENST00000524523 PKD1P98161 4303 aa4.33□□□□□ -1.72
CTR9-202ENST00000524523 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
CTR9-202ENST00000524523 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
CTR9-202ENST00000524523 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
CTR9-202ENST00000524523 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
CTR9-202ENST00000524523 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
CTR9-202ENST00000524523 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
CTR9-202ENST00000524523 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
CTR9-202ENST00000524523 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
CTR9-202ENST00000524523 LINC00313P59037 77 aa4.3□□□□□ -1.72
CTR9-202ENST00000524523 LINC00304Q8N9R0 145 aa4.3□□□□□ -1.72
CTR9-202ENST00000524523 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
CTR9-202ENST00000524523 SMR3BP02814 79 aaPredicted RBP4.29□□□□□ -1.72
CTR9-202ENST00000524523 CYSTM1Q9H1C7 97 aa4.29□□□□□ -1.72
CTR9-202ENST00000524523 SNURFQ9Y675 71 aa4.29□□□□□ -1.72
CTR9-202ENST00000524523 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
CTR9-202ENST00000524523 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
CTR9-202ENST00000524523 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
CTR9-202ENST00000524523 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
CTR9-202ENST00000524523 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.73
CTR9-202ENST00000524523 H0Y9P7 68 aa4.27□□□□□ -1.73
CTR9-202ENST00000524523 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
CTR9-202ENST00000524523 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
CTR9-202ENST00000524523 SACSQ9NZJ4 4579 aa4.26□□□□□ -1.73
CTR9-202ENST00000524523 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
CTR9-202ENST00000524523 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
CTR9-202ENST00000524523 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
CTR9-202ENST00000524523 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
CTR9-202ENST00000524523 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
CTR9-202ENST00000524523 NDUFS5O43920 106 aa4.23□□□□□ -1.73
CTR9-202ENST00000524523 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
CTR9-202ENST00000524523 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
CTR9-202ENST00000524523 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
CTR9-202ENST00000524523 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
CTR9-202ENST00000524523 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
CTR9-202ENST00000524523 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
CTR9-202ENST00000524523 Q5VSD8 79 aa4.21□□□□□ -1.74
CTR9-202ENST00000524523 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
CTR9-202ENST00000524523 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
CTR9-202ENST00000524523 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
CTR9-202ENST00000524523 RYR2Q92736 4967 aa4.17□□□□□ -1.74
CTR9-202ENST00000524523 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
CTR9-202ENST00000524523 MT3P25713 68 aa4.17□□□□□ -1.74
CTR9-202ENST00000524523 Q5W150 140 aa4.17□□□□□ -1.74
CTR9-202ENST00000524523 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
CTR9-202ENST00000524523 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
CTR9-202ENST00000524523 OXTP01178 125 aa4.16□□□□□ -1.74
CTR9-202ENST00000524523 A8MUU9 505 aa4.15□□□□□ -1.75
CTR9-202ENST00000524523 V9GYY9 64 aa4.12□□□□□ -1.75
CTR9-202ENST00000524523 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
CTR9-202ENST00000524523 ACYP2P14621 99 aa4.1□□□□□ -1.75
CTR9-202ENST00000524523 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
CTR9-202ENST00000524523 Q1T7F1 81 aa4.09□□□□□ -1.75
CTR9-202ENST00000524523 PCOTHQ58A44 107 aa4.09□□□□□ -1.75
CTR9-202ENST00000524523 C7orf65Q6ZTY9 151 aa4.09□□□□□ -1.75
CTR9-202ENST00000524523 A8MUN3 132 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms