RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
SPIDR-225ENST00000524141 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.43
SPIDR-225ENST00000524141 ACYP2P14621 99 aa6.09□□□□□ -1.43
SPIDR-225ENST00000524141 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
SPIDR-225ENST00000524141 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
SPIDR-225ENST00000524141 ZNF861PO60384 105 aa6.08□□□□□ -1.44
SPIDR-225ENST00000524141 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
SPIDR-225ENST00000524141 Q5W150 140 aa6.06□□□□□ -1.44
SPIDR-225ENST00000524141 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
SPIDR-225ENST00000524141 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
SPIDR-225ENST00000524141 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
SPIDR-225ENST00000524141 NUPR2A6NF83 97 aa6.05□□□□□ -1.44
SPIDR-225ENST00000524141 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
SPIDR-225ENST00000524141 ANAPC11Q9NYG5 84 aa6.04□□□□□ -1.44
SPIDR-225ENST00000524141 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
SPIDR-225ENST00000524141 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
SPIDR-225ENST00000524141 A0A087WTM6 91 aa6.03□□□□□ -1.44
SPIDR-225ENST00000524141 RTL8CO15255 209 aa6.02□□□□□ -1.45
SPIDR-225ENST00000524141 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
SPIDR-225ENST00000524141 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
SPIDR-225ENST00000524141 MGAM2Q2M2H8 2515 aa6□□□□□ -1.45
SPIDR-225ENST00000524141 CIRBP-AS1Q8TBR5 109 aa6□□□□□ -1.45
SPIDR-225ENST00000524141 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
SPIDR-225ENST00000524141 A0A1B0GU69 56 aa5.99□□□□□ -1.45
SPIDR-225ENST00000524141 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
SPIDR-225ENST00000524141 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
SPIDR-225ENST00000524141 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
SPIDR-225ENST00000524141 LINC00313P59037 77 aa5.97□□□□□ -1.45
SPIDR-225ENST00000524141 PLECQ15149 4684 aaKnown RBP5.96□□□□□ -1.46
SPIDR-225ENST00000524141 FRAS1Q86XX4 4008 aa5.96□□□□□ -1.46
SPIDR-225ENST00000524141 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
SPIDR-225ENST00000524141 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SPIDR-225ENST00000524141 PLA2G1BP04054 148 aaKnown RBP5.93□□□□□ -1.46
SPIDR-225ENST00000524141 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
SPIDR-225ENST00000524141 UQCR11O14957 56 aa5.92□□□□□ -1.46
SPIDR-225ENST00000524141 VPS13DQ5THJ4 4388 aa5.91□□□□□ -1.46
SPIDR-225ENST00000524141 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.47
SPIDR-225ENST00000524141 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
SPIDR-225ENST00000524141 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
SPIDR-225ENST00000524141 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
SPIDR-225ENST00000524141 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
SPIDR-225ENST00000524141 C1orf134Q5TEV5 83 aa5.85□□□□□ -1.47
SPIDR-225ENST00000524141 IGKV2D-30A0A075B6S6 120 aa5.84□□□□□ -1.48
SPIDR-225ENST00000524141 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
SPIDR-225ENST00000524141 PRKDCP78527 4128 aaKnown RBP5.82□□□□□ -1.48
SPIDR-225ENST00000524141 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
SPIDR-225ENST00000524141 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
SPIDR-225ENST00000524141 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
SPIDR-225ENST00000524141 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
SPIDR-225ENST00000524141 KMT2AQ03164 3969 aa5.78□□□□□ -1.48
SPIDR-225ENST00000524141 MEGF8Q7Z7M0 2845 aa5.78□□□□□ -1.48
SPIDR-225ENST00000524141 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
SPIDR-225ENST00000524141 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
SPIDR-225ENST00000524141 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
SPIDR-225ENST00000524141 TGP01266 2768 aa5.74□□□□□ -1.49
SPIDR-225ENST00000524141 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
SPIDR-225ENST00000524141 SPINK1P00995 79 aa5.72□□□□□ -1.49
SPIDR-225ENST00000524141 LY6G6CO95867 125 aa5.72□□□□□ -1.49
SPIDR-225ENST00000524141 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
SPIDR-225ENST00000524141 Q6ZSA8 131 aa5.72□□□□□ -1.49
SPIDR-225ENST00000524141 CSAG1Q6PB30 78 aa5.71□□□□□ -1.5
SPIDR-225ENST00000524141 DNAH6Q9C0G6 4158 aa5.7□□□□□ -1.5
SPIDR-225ENST00000524141 Q8N1X5 172 aa5.69□□□□□ -1.5
SPIDR-225ENST00000524141 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
SPIDR-225ENST00000524141 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
SPIDR-225ENST00000524141 KRTAP10-1P60331 282 aa5.65□□□□□ -1.5
SPIDR-225ENST00000524141 RPS29P62273 56 aaKnown RBP5.65□□□□□ -1.5
SPIDR-225ENST00000524141 A8MUU9 505 aa5.63□□□□□ -1.51
SPIDR-225ENST00000524141 H0YAA0 97 aa5.63□□□□□ -1.51
SPIDR-225ENST00000524141 LRP1BQ9NZR2 4599 aa5.61□□□□□ -1.51
SPIDR-225ENST00000524141 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
SPIDR-225ENST00000524141 A0A1B0GU33 70 aa5.6□□□□□ -1.51
SPIDR-225ENST00000524141 VPS13BQ7Z7G8 4022 aa5.59□□□□□ -1.51
SPIDR-225ENST00000524141 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
SPIDR-225ENST00000524141 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
SPIDR-225ENST00000524141 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
SPIDR-225ENST00000524141 PKD1P98161 4303 aa5.55□□□□□ -1.52
SPIDR-225ENST00000524141 K7ERS5 55 aa5.53□□□□□ -1.52
SPIDR-225ENST00000524141 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
SPIDR-225ENST00000524141 H3BS24 57 aa5.51□□□□□ -1.53
SPIDR-225ENST00000524141 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
SPIDR-225ENST00000524141 FAT2Q9NYQ8 4349 aa5.5□□□□□ -1.53
SPIDR-225ENST00000524141 ROMO1P60602 79 aa5.46□□□□□ -1.54
SPIDR-225ENST00000524141 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
SPIDR-225ENST00000524141 SACSQ9NZJ4 4579 aa5.45□□□□□ -1.54
SPIDR-225ENST00000524141 DNHD1Q96M86 4753 aa5.42□□□□□ -1.54
SPIDR-225ENST00000524141 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
SPIDR-225ENST00000524141 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
SPIDR-225ENST00000524141 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
SPIDR-225ENST00000524141 FLG2Q5D862 2391 aaPredicted RBP5.36□□□□□ -1.55
SPIDR-225ENST00000524141 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
SPIDR-225ENST00000524141 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
SPIDR-225ENST00000524141 CRIPTQ9P021 101 aa5.34□□□□□ -1.55
SPIDR-225ENST00000524141 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
SPIDR-225ENST00000524141 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
SPIDR-225ENST00000524141 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
SPIDR-225ENST00000524141 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
SPIDR-225ENST00000524141 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
SPIDR-225ENST00000524141 A0A0D9SG42 100 aa5.26□□□□□ -1.57
SPIDR-225ENST00000524141 S4R3F8 94 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms