RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 ANKHD1Q8IWZ3 2542 aaKnown RBP2.77□□□□□ -1.97
EFCAB13-213ENST00000523978 CCL22O00626 93 aa2.76□□□□□ -1.97
EFCAB13-213ENST00000523978 PCOTHQ58A44 107 aa2.76□□□□□ -1.97
EFCAB13-213ENST00000523978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.76□□□□□ -1.97
EFCAB13-213ENST00000523978 FBN1P35555 2871 aaKnown RBP2.75□□□□□ -1.97
EFCAB13-213ENST00000523978 H0YAA0 97 aa2.75□□□□□ -1.97
EFCAB13-213ENST00000523978 HIVEP3Q5T1R4 2406 aa2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 FLNAP21333 2647 aaKnown RBP2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 CENPEQ02224 2701 aa2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 CCDC168Q8NDH2 2452 aa2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 WFDC13Q8IUB5 93 aa2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 LRBAP50851 2863 aa2.74□□□□□ -1.97
EFCAB13-213ENST00000523978 NBEAL2Q6ZNJ1 2754 aa2.72□□□□□ -1.97
EFCAB13-213ENST00000523978 NBASA2RRP1 2371 aa2.72□□□□□ -1.97
EFCAB13-213ENST00000523978 UNQ6190/PRO20217Q6UXQ8 127 aa2.72□□□□□ -1.97
EFCAB13-213ENST00000523978 WFDC10BQ8IUB3 73 aa2.72□□□□□ -1.97
EFCAB13-213ENST00000523978 HIVEP1P15822 2718 aa2.72□□□□□ -1.97
EFCAB13-213ENST00000523978 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
EFCAB13-213ENST00000523978 LYNX1P0DP58 116 aa2.71□□□□□ -1.98
EFCAB13-213ENST00000523978 CSPG4Q6UVK1 2322 aa2.71□□□□□ -1.98
EFCAB13-213ENST00000523978 ASCC3Q8N3C0 2202 aaKnown RBP2.7□□□□□ -1.98
EFCAB13-213ENST00000523978 LEAP2Q969E1 77 aa2.7□□□□□ -1.98
EFCAB13-213ENST00000523978 BOD1L1Q8NFC6 3051 aa2.7□□□□□ -1.98
EFCAB13-213ENST00000523978 PDZD2O15018 2839 aa2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 M0QY20 66 aa2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 SPENQ96T58 3664 aaKnown RBP2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 ADGRG4Q8IZF6 3080 aa2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 TLN2Q9Y4G6 2542 aa2.69□□□□□ -1.98
EFCAB13-213ENST00000523978 CRYBG3Q68DQ2 2970 aa2.68□□□□□ -1.98
EFCAB13-213ENST00000523978 KNL1Q8NG31 2342 aa2.68□□□□□ -1.98
EFCAB13-213ENST00000523978 OTOGQ6ZRI0 2925 aa2.68□□□□□ -1.98
EFCAB13-213ENST00000523978 CSMD1Q96PZ7 3565 aa2.67□□□□□ -1.98
EFCAB13-213ENST00000523978 PKD1L1Q8TDX9 2849 aa2.67□□□□□ -1.98
EFCAB13-213ENST00000523978 DEFB131AP59861 70 aa2.67□□□□□ -1.98
EFCAB13-213ENST00000523978 Q6ZSA8 131 aa2.67□□□□□ -1.98
EFCAB13-213ENST00000523978 MGAQ8IWI9 3026 aa2.67□□□□□ -1.98
EFCAB13-213ENST00000523978 DEFB106AQ8N104 65 aa2.66□□□□□ -1.98
EFCAB13-213ENST00000523978 CELSR1Q9NYQ6 3014 aa2.66□□□□□ -1.98
EFCAB13-213ENST00000523978 ATMQ13315 3056 aa2.65□□□□□ -1.99
EFCAB13-213ENST00000523978 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
EFCAB13-213ENST00000523978 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
EFCAB13-213ENST00000523978 CELSR2Q9HCU4 2923 aa2.64□□□□□ -1.99
EFCAB13-213ENST00000523978 MMP24-AS1A0A0U1RRL7 71 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 COX6A2Q02221 97 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 TMEM167AQ8TBQ9 72 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 KAAG1Q9UBP8 84 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 ACANP16112 2415 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
EFCAB13-213ENST00000523978 LAMA1P25391 3075 aa2.62□□□□□ -1.99
EFCAB13-213ENST00000523978 BRD3OSQ6XYD6 125 aa2.62□□□□□ -1.99
EFCAB13-213ENST00000523978 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
EFCAB13-213ENST00000523978 TGP01266 2768 aa2.62□□□□□ -1.99
EFCAB13-213ENST00000523978 USF3Q68DE3 2245 aa2.61□□□□□ -1.99
EFCAB13-213ENST00000523978 APCP25054 2843 aa2.6□□□□□ -1.99
EFCAB13-213ENST00000523978 DEFB119Q8N690 84 aa2.6□□□□□ -1.99
EFCAB13-213ENST00000523978 PLCE1Q9P212 2302 aa2.6□□□□□ -1.99
EFCAB13-213ENST00000523978 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
EFCAB13-213ENST00000523978 RYR3Q15413 4870 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 DEFB130BP0DP73 79 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 DEFB130AP0DP74 79 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 WT1-ASQ06250 92 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 LELP1Q5T871 98 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 AKAP9Q99996 3911 aa2.58□□□□□ -2
EFCAB13-213ENST00000523978 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
EFCAB13-213ENST00000523978 SMR3AQ99954 134 aa2.57□□□□□ -2
EFCAB13-213ENST00000523978 Q9Y3F1 56 aa2.57□□□□□ -2
EFCAB13-213ENST00000523978 CSMD2Q7Z408 3487 aa2.56□□□□□ -2
EFCAB13-213ENST00000523978 WNK1Q9H4A3 2382 aa2.56□□□□□ -2
EFCAB13-213ENST00000523978 PCLOQ9Y6V0 5065 aa2.56□□□□□ -2
EFCAB13-213ENST00000523978 KRTAP10-10P60014 251 aa2.56□□□□□ -2
EFCAB13-213ENST00000523978 H3BUA1 57 aa2.55□□□□□ -2
EFCAB13-213ENST00000523978 K7EIL1 84 aa2.55□□□□□ -2
EFCAB13-213ENST00000523978 K7EIM0 57 aa2.55□□□□□ -2
EFCAB13-213ENST00000523978 CD52P31358 61 aa2.55□□□□□ -2
EFCAB13-213ENST00000523978 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
EFCAB13-213ENST00000523978 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
EFCAB13-213ENST00000523978 CNTRLQ7Z7A1 2325 aa2.54□□□□□ -2
EFCAB13-213ENST00000523978 TOMM7Q9P0U1 55 aa2.54□□□□□ -2
EFCAB13-213ENST00000523978 DEFB109BQ30KR1 87 aa2.53□□□□□ -2
EFCAB13-213ENST00000523978 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
EFCAB13-213ENST00000523978 DCHS2Q6V1P9 2916 aa2.52□□□□□ -2.01
EFCAB13-213ENST00000523978 RPL39P5Q59GN2 51 aa2.52□□□□□ -2.01
EFCAB13-213ENST00000523978 RYR1P21817 5038 aa2.52□□□□□ -2.01
EFCAB13-213ENST00000523978 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
EFCAB13-213ENST00000523978 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
EFCAB13-213ENST00000523978 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
EFCAB13-213ENST00000523978 KMT2CQ8NEZ4 4911 aaKnown RBP2.51□□□□□ -2.01
EFCAB13-213ENST00000523978 CLPSL2Q6UWE3 100 aa2.5□□□□□ -2.01
EFCAB13-213ENST00000523978 PKDREJQ9NTG1 2253 aa2.5□□□□□ -2.01
EFCAB13-213ENST00000523978 WNK2Q9Y3S1 2297 aa2.5□□□□□ -2.01
EFCAB13-213ENST00000523978 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
EFCAB13-213ENST00000523978 A8MTW9 85 aa2.49□□□□□ -2.01
EFCAB13-213ENST00000523978 Q5VSD8 79 aa2.49□□□□□ -2.01
EFCAB13-213ENST00000523978 SONP18583 2426 aaKnown RBP2.49□□□□□ -2.01
EFCAB13-213ENST00000523978 SPRR1AP35321 89 aa2.48□□□□□ -2.01
EFCAB13-213ENST00000523978 PRO0255Q9UI72 69 aa2.48□□□□□ -2.01
EFCAB13-213ENST00000523978 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
EFCAB13-213ENST00000523978 HYDINQ4G0P3 5121 aa2.48□□□□□ -2.01
EFCAB13-213ENST00000523978 DEFB104AQ8WTQ1 72 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms