RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ATP5EP2Q5VTU8 51 aa3.16□□□□□ -1.9
PABPC1-223ENST00000523636 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 ERC2-IT1O76042 136 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 KRTAP10-8P60410 259 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 ROMO1P60602 79 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 C2orf82Q6UX34 121 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 Q6ZQT0 140 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 NOP10Q9NPE3 64 aaKnown RBP3.15□□□□□ -1.91
PABPC1-223ENST00000523636 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 CDKN2A-AS1Q9UH64 79 aa3.15□□□□□ -1.91
PABPC1-223ENST00000523636 HTN3P15516 51 aa3.14□□□□□ -1.91
PABPC1-223ENST00000523636 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
PABPC1-223ENST00000523636 Q6ZTI0 123 aa3.14□□□□□ -1.91
PABPC1-223ENST00000523636 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
PABPC1-223ENST00000523636 CYP4F30PQ9H0H9 118 aa3.14□□□□□ -1.91
PABPC1-223ENST00000523636 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PABPC1-223ENST00000523636 TEX49A0A1B0GTD5 131 aa3.13□□□□□ -1.91
PABPC1-223ENST00000523636 LRCOL1A6NCL2 159 aa3.13□□□□□ -1.91
PABPC1-223ENST00000523636 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
PABPC1-223ENST00000523636 COX7B2Q8TF08 81 aa3.13□□□□□ -1.91
PABPC1-223ENST00000523636 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
PABPC1-223ENST00000523636 H0YGX0 51 aa3.12□□□□□ -1.91
PABPC1-223ENST00000523636 RPL37AP61513 92 aaKnown RBP3.12□□□□□ -1.91
PABPC1-223ENST00000523636 COX6A2Q02221 97 aa3.12□□□□□ -1.91
PABPC1-223ENST00000523636 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
PABPC1-223ENST00000523636 H3BPC8 53 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 CRPP02741 224 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 CCL18P55774 89 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 LINC00158P58513 81 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
PABPC1-223ENST00000523636 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 ZNF625Q96I27 306 aaPredicted RBP3.11□□□□□ -1.91
PABPC1-223ENST00000523636 PRO0255Q9UI72 69 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
PABPC1-223ENST00000523636 DNAL4O96015 105 aa3.1□□□□□ -1.91
PABPC1-223ENST00000523636 BAALC-AS2P0C853 105 aa3.1□□□□□ -1.91
PABPC1-223ENST00000523636 SPART-AS1P0CW21 52 aa3.1□□□□□ -1.91
PABPC1-223ENST00000523636 KMT2DO14686 5537 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 LINC00959A0A1B0GUT2 108 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 H3BQ85 93 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 DEFB130BP0DP73 79 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 DEFB130AP0DP74 79 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 COX17Q14061 63 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 C20orf197Q8N268 126 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 LINC00612Q8N6U2 182 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
PABPC1-223ENST00000523636 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
PABPC1-223ENST00000523636 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
PABPC1-223ENST00000523636 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
PABPC1-223ENST00000523636 Q8IZM0 81 aa3.08□□□□□ -1.92
PABPC1-223ENST00000523636 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PABPC1-223ENST00000523636 C9orf116Q5BN46 136 aaPredicted RBP3.07□□□□□ -1.92
PABPC1-223ENST00000523636 Q5W150 140 aa3.07□□□□□ -1.92
PABPC1-223ENST00000523636 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
PABPC1-223ENST00000523636 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
PABPC1-223ENST00000523636 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
PABPC1-223ENST00000523636 IGLV4-60A0A075B6I1 120 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 HCG22E2RYF7 251 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 F8WEM9 126 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 JMJD7-PLA2G4BH0Y9G9 81 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 HIGD2BQ4VC39 106 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 CASC2Q6XLA1 102 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 C14orf132Q9NPU4 83 aa3.06□□□□□ -1.92
PABPC1-223ENST00000523636 ANGP03950 147 aaKnown RBP3.05□□□□□ -1.92
PABPC1-223ENST00000523636 SMIM11BQ8TCY0 68 aa3.05□□□□□ -1.92
PABPC1-223ENST00000523636 ORMDL1Q9P0S3 153 aa3.05□□□□□ -1.92
PABPC1-223ENST00000523636 A0A087WSZ3 146 aa3.04□□□□□ -1.92
PABPC1-223ENST00000523636 TRAV22A0A0B4J277 110 aa3.04□□□□□ -1.92
PABPC1-223ENST00000523636 FAM168BA1KXE4 195 aa3.04□□□□□ -1.92
PABPC1-223ENST00000523636 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
PABPC1-223ENST00000523636 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 H3BNG1 76 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 IGLV7-43P04211 117 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 P0C880 135 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 DEFB116Q30KQ4 102 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
PABPC1-223ENST00000523636 A0A096LPF7 62 aa3.02□□□□□ -1.93
PABPC1-223ENST00000523636 PDE6GP18545 87 aa3.02□□□□□ -1.93
PABPC1-223ENST00000523636 OBSCN-AS1Q96MR7 158 aa3.02□□□□□ -1.93
PABPC1-223ENST00000523636 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
PABPC1-223ENST00000523636 IGLV10-54A0A075B6I4 117 aa3.01□□□□□ -1.93
PABPC1-223ENST00000523636 GVQW2A0A096LPI5 108 aaPredicted RBP3.01□□□□□ -1.93
PABPC1-223ENST00000523636 LOC101927531A0A1B0GV80 90 aa3.01□□□□□ -1.93
PABPC1-223ENST00000523636 DSCR10P59022 87 aa3.01□□□□□ -1.93
PABPC1-223ENST00000523636 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 A0A1B0GU33 70 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 MT1HP80294 61 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 SPAG11BQ08648 103 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 MOBPQ13875 183 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 Q5VV11 94 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 LINC00167Q96N53 147 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 PRR34Q9NV39 138 aa3□□□□□ -1.93
PABPC1-223ENST00000523636 ELOF1P60002 83 aaKnown RBP2.99□□□□□ -1.93
PABPC1-223ENST00000523636 CLPSL2Q6UWE3 100 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms