RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ATP5EP2	Q5VTU8	51 aa		3.16	□□□□□ -1.9
PABPC1-223	ENST00000523636	TRAV7	A0A075B6U4	112 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	ERC2-IT1	O76042	136 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	KRTAP10-8	P60410	259 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	ROMO1	P60602	79 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	C2orf82	Q6UX34	121 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636		Q6ZQT0	140 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	LINC00269	Q8N2A0	174 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	NOP10	Q9NPE3	64 aa	Known RBP	3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	CDC42SE2	Q9NRR3	84 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	CDKN2A-AS1	Q9UH64	79 aa		3.15	□□□□□ -1.91
PABPC1-223	ENST00000523636	HTN3	P15516	51 aa		3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636	KRTAP10-6	P60371	365 aa	Predicted RBP	3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636		Q6ZTI0	123 aa		3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636	LINC00308	Q8TCZ7	52 aa		3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636	CYP4F30P	Q9H0H9	118 aa		3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636	GPR98	Q8WXG9	6306 aa		3.14	□□□□□ -1.91
PABPC1-223	ENST00000523636	TEX49	A0A1B0GTD5	131 aa		3.13	□□□□□ -1.91
PABPC1-223	ENST00000523636	LRCOL1	A6NCL2	159 aa		3.13	□□□□□ -1.91
PABPC1-223	ENST00000523636	C9orf129	Q5T035	196 aa	Known RBP	3.13	□□□□□ -1.91
PABPC1-223	ENST00000523636	COX7B2	Q8TF08	81 aa		3.13	□□□□□ -1.91
PABPC1-223	ENST00000523636	TRBV6-8	A0A0A6YYG3	113 aa		3.12	□□□□□ -1.91
PABPC1-223	ENST00000523636		H0YGX0	51 aa		3.12	□□□□□ -1.91
PABPC1-223	ENST00000523636	RPL37A	P61513	92 aa	Known RBP	3.12	□□□□□ -1.91
PABPC1-223	ENST00000523636	COX6A2	Q02221	97 aa		3.12	□□□□□ -1.91
PABPC1-223	ENST00000523636	SPANXA2-OT1	Q8N9U9	137 aa		3.12	□□□□□ -1.91
PABPC1-223	ENST00000523636		H3BPC8	53 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	CRP	P02741	224 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	CCL18	P55774	89 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	LINC00158	P58513	81 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	KRTAP10-7	P60409	375 aa	Predicted RBP	3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	KRTAP20-1	Q3LI63	56 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	ZNF625	Q96I27	306 aa	Predicted RBP	3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	PRO0255	Q9UI72	69 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	MDN1	Q9NU22	5596 aa		3.11	□□□□□ -1.91
PABPC1-223	ENST00000523636	DNAL4	O96015	105 aa		3.1	□□□□□ -1.91
PABPC1-223	ENST00000523636	BAALC-AS2	P0C853	105 aa		3.1	□□□□□ -1.91
PABPC1-223	ENST00000523636	SPART-AS1	P0CW21	52 aa		3.1	□□□□□ -1.91
PABPC1-223	ENST00000523636	KMT2D	O14686	5537 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	LINC00959	A0A1B0GUT2	108 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636		H3BQ85	93 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	DEFB130B	P0DP73	79 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	DEFB130A	P0DP74	79 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	COX17	Q14061	63 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	C20orf197	Q8N268	126 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	LINC00612	Q8N6U2	182 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	TOMM7	Q9P0U1	55 aa		3.09	□□□□□ -1.91
PABPC1-223	ENST00000523636	IGKV3OR2-268	A0A0C4DH90	116 aa		3.08	□□□□□ -1.92
PABPC1-223	ENST00000523636	KRTAP5-11	Q6L8G4	156 aa		3.08	□□□□□ -1.92
PABPC1-223	ENST00000523636	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.08	□□□□□ -1.92
PABPC1-223	ENST00000523636		Q8IZM0	81 aa		3.08	□□□□□ -1.92
PABPC1-223	ENST00000523636	KRTAP6-3	Q3LI67	103 aa		3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636	C9orf116	Q5BN46	136 aa	Predicted RBP	3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636		Q5W150	140 aa		3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636	SPTSSB	Q8NFR3	76 aa		3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636	TYMSOS	Q8TAI1	123 aa		3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636	LIMD2	Q9BT23	127 aa		3.07	□□□□□ -1.92
PABPC1-223	ENST00000523636	IGLV4-60	A0A075B6I1	120 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	HCG22	E2RYF7	251 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636		F8WEM9	126 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	HIGD2B	Q4VC39	106 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	LCE1F	Q5T754	118 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	CASC2	Q6XLA1	102 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	C20orf166-AS1	Q96NR2	134 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	C14orf132	Q9NPU4	83 aa		3.06	□□□□□ -1.92
PABPC1-223	ENST00000523636	ANG	P03950	147 aa	Known RBP	3.05	□□□□□ -1.92
PABPC1-223	ENST00000523636	SMIM11B	Q8TCY0	68 aa		3.05	□□□□□ -1.92
PABPC1-223	ENST00000523636	ORMDL1	Q9P0S3	153 aa		3.05	□□□□□ -1.92
PABPC1-223	ENST00000523636		A0A087WSZ3	146 aa		3.04	□□□□□ -1.92
PABPC1-223	ENST00000523636	TRAV22	A0A0B4J277	110 aa		3.04	□□□□□ -1.92
PABPC1-223	ENST00000523636	FAM168B	A1KXE4	195 aa		3.04	□□□□□ -1.92
PABPC1-223	ENST00000523636	CDC42SE1	Q9NRR8	79 aa		3.04	□□□□□ -1.92
PABPC1-223	ENST00000523636	IGKV2-28	A0A075B6P5	120 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636		H3BNG1	76 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636	IGKV2D-28	P01615	120 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636	IGLV7-43	P04211	117 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636		P0C880	135 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636	MIR22HG	Q0VDD5	57 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636	DEFB116	Q30KQ4	102 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636	LCE1E	Q5T753	118 aa		3.03	□□□□□ -1.92
PABPC1-223	ENST00000523636		A0A096LPF7	62 aa		3.02	□□□□□ -1.93
PABPC1-223	ENST00000523636	PDE6G	P18545	87 aa		3.02	□□□□□ -1.93
PABPC1-223	ENST00000523636	OBSCN-AS1	Q96MR7	158 aa		3.02	□□□□□ -1.93
PABPC1-223	ENST00000523636	KRTAP4-1	Q9BYQ7	146 aa		3.02	□□□□□ -1.93
PABPC1-223	ENST00000523636	IGLV10-54	A0A075B6I4	117 aa		3.01	□□□□□ -1.93
PABPC1-223	ENST00000523636	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.01	□□□□□ -1.93
PABPC1-223	ENST00000523636	LOC101927531	A0A1B0GV80	90 aa		3.01	□□□□□ -1.93
PABPC1-223	ENST00000523636	DSCR10	P59022	87 aa		3.01	□□□□□ -1.93
PABPC1-223	ENST00000523636	TRBV7-4	A0A0J9YYF1	115 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636		A0A1B0GU33	70 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	MT1H	P80294	61 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	SPAG11B	Q08648	103 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	MOBP	Q13875	183 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	KRTAP19-2	Q3LHN2	52 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636		Q5VV11	94 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	LINC00167	Q96N53	147 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	PRR34	Q9NV39	138 aa		3	□□□□□ -1.93
PABPC1-223	ENST00000523636	ELOF1	P60002	83 aa	Known RBP	2.99	□□□□□ -1.93
PABPC1-223	ENST00000523636	CLPSL2	Q6UWE3	100 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 1856.3 ms