RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 ANK3Q12955 4377 aaKnown RBP2.01□□□□□ -2.09
CTNNA1-238ENST00000523298 NSD1Q96L73 2696 aaPredicted RBP2.01□□□□□ -2.09
CTNNA1-238ENST00000523298 SVEP1Q4LDE5 3571 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 CUBNO60494 3623 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 OTOGQ6ZRI0 2925 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 TRGV2A0A075B6R0 118 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 LOC110117498A0A087WWA1 95 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 KRTAP12-3P60328 96 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 DEFB114Q30KQ6 69 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 ARHGAP5-AS1Q96IT6 56 aa2□□□□□ -2.09
CTNNA1-238ENST00000523298 FXYD4P59646 89 aa1.99□□□□□ -2.09
CTNNA1-238ENST00000523298 KAAG1Q9UBP8 84 aa1.99□□□□□ -2.09
CTNNA1-238ENST00000523298 TIMM8BQ9Y5J9 83 aaPredicted RBP1.99□□□□□ -2.09
CTNNA1-238ENST00000523298 INE1O15225 51 aa1.98□□□□□ -2.09
CTNNA1-238ENST00000523298 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CTNNA1-238ENST00000523298 MXRA5Q9NR99 2828 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 A0A1B0GU69 56 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 H3BRN7 92 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 H3BUX3 64 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 ACYP2P14621 99 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 RPL39P5Q59GN2 51 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 KCNQ1DNQ9H478 68 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 SORL1Q92673 2214 aa1.97□□□□□ -2.09
CTNNA1-238ENST00000523298 NF1P21359 2839 aa1.96□□□□□ -2.1
CTNNA1-238ENST00000523298 NIPBLQ6KC79 2804 aaeCLIP1.96□□□□□ -2.12e-7■■■■□ 20.4
CTNNA1-238ENST00000523298 ATRQ13535 2644 aa1.96□□□□□ -2.1
CTNNA1-238ENST00000523298 STAB1Q9NY15 2570 aa1.96□□□□□ -2.1
CTNNA1-238ENST00000523298 COX7BP24311 80 aa1.96□□□□□ -2.1
CTNNA1-238ENST00000523298 ETDCA0A1B0GVM5 59 aa1.95□□□□□ -2.1
CTNNA1-238ENST00000523298 M0R2N4 97 aa1.95□□□□□ -2.1
CTNNA1-238ENST00000523298 NDUFA3O95167 84 aa1.95□□□□□ -2.1
CTNNA1-238ENST00000523298 APELAP0DMC3 54 aa1.95□□□□□ -2.1
CTNNA1-238ENST00000523298 COL6A5A8TX70 2615 aa1.95□□□□□ -2.1
CTNNA1-238ENST00000523298 MINOS1Q5TGZ0 78 aa1.94□□□□□ -2.1
CTNNA1-238ENST00000523298 C10orf99Q6UWK7 81 aa1.94□□□□□ -2.1
CTNNA1-238ENST00000523298 G3V318 75 aa1.93□□□□□ -2.1
CTNNA1-238ENST00000523298 HAMPP81172 84 aa1.93□□□□□ -2.1
CTNNA1-238ENST00000523298 SPINK9Q5DT21 86 aa1.93□□□□□ -2.1
CTNNA1-238ENST00000523298 H0YGX0 51 aa1.92□□□□□ -2.1
CTNNA1-238ENST00000523298 NCR3O14931 201 aa1.92□□□□□ -2.1
CTNNA1-238ENST00000523298 DEFB136Q30KP8 78 aa1.92□□□□□ -2.1
CTNNA1-238ENST00000523298 TENM1Q9UKZ4 2725 aa1.92□□□□□ -2.1
CTNNA1-238ENST00000523298 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
CTNNA1-238ENST00000523298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.91□□□□□ -2.1
CTNNA1-238ENST00000523298 TMEM167BQ9NRX6 74 aa1.91□□□□□ -2.1
CTNNA1-238ENST00000523298 CMYA5Q8N3K9 4069 aa1.91□□□□□ -2.1
CTNNA1-238ENST00000523298 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
CTNNA1-238ENST00000523298 IAPPP10997 89 aa1.9□□□□□ -2.11
CTNNA1-238ENST00000523298 Q6ZQY7 126 aa1.9□□□□□ -2.11
CTNNA1-238ENST00000523298 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
CTNNA1-238ENST00000523298 TRRAPQ9Y4A5 3859 aa1.9□□□□□ -2.11
CTNNA1-238ENST00000523298 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
CTNNA1-238ENST00000523298 TMEM167AQ8TBQ9 72 aa1.89□□□□□ -2.11
CTNNA1-238ENST00000523298 GVQW2A0A096LPI5 108 aaPredicted RBP1.88□□□□□ -2.11
CTNNA1-238ENST00000523298 LY6G6CO95867 125 aa1.88□□□□□ -2.11
CTNNA1-238ENST00000523298 PRCDQ00LT1 54 aa1.88□□□□□ -2.11
CTNNA1-238ENST00000523298 Q6ZRX8 168 aa1.88□□□□□ -2.11
CTNNA1-238ENST00000523298 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
CTNNA1-238ENST00000523298 DNHD1Q96M86 4753 aa1.87□□□□□ -2.11
CTNNA1-238ENST00000523298 KRTAP21-3Q3LHN1 58 aa1.87□□□□□ -2.11
CTNNA1-238ENST00000523298 SSBP3-AS1Q7Z2R9 100 aa1.87□□□□□ -2.11
CTNNA1-238ENST00000523298 SMIM11BQ8TCY0 68 aa1.87□□□□□ -2.11
CTNNA1-238ENST00000523298 MGAM2Q2M2H8 2515 aa1.87□□□□□ -2.11
CTNNA1-238ENST00000523298 VWFP04275 2813 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 NBEAL1Q6ZS30 2694 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 H3BUA1 57 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 I3L2K1 104 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 K7EIM0 57 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 CRIP1P50238 77 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 USMG5Q96IX5 58 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 PKD1L1Q8TDX9 2849 aa1.86□□□□□ -2.11
CTNNA1-238ENST00000523298 ANK2Q01484 3957 aa1.85□□□□□ -2.11
CTNNA1-238ENST00000523298 DEFB1P60022 68 aa1.84□□□□□ -2.11
CTNNA1-238ENST00000523298 RHPN1-AS1Q9BWJ2 59 aa1.84□□□□□ -2.11
CTNNA1-238ENST00000523298 K7EIL1 84 aa1.83□□□□□ -2.12
CTNNA1-238ENST00000523298 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
CTNNA1-238ENST00000523298 LINC00158P58513 81 aa1.83□□□□□ -2.12
CTNNA1-238ENST00000523298 LINC00308Q8TCZ7 52 aa1.83□□□□□ -2.12
CTNNA1-238ENST00000523298 DNAH3Q8TD57 4116 aa1.83□□□□□ -2.12
CTNNA1-238ENST00000523298 DEFB131AP59861 70 aa1.82□□□□□ -2.12
CTNNA1-238ENST00000523298 KLK9Q2XQG4 91 aa1.82□□□□□ -2.12
CTNNA1-238ENST00000523298 SMIM2Q9BVW6 85 aa1.82□□□□□ -2.12
CTNNA1-238ENST00000523298 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
CTNNA1-238ENST00000523298 TGP01266 2768 aa1.81□□□□□ -2.12
CTNNA1-238ENST00000523298 CNFNQ9BYD5 112 aa1.81□□□□□ -2.12
CTNNA1-238ENST00000523298 CDKN2A-AS1Q9UH64 79 aa1.81□□□□□ -2.12
CTNNA1-238ENST00000523298 NBEAL2Q6ZNJ1 2754 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 DEFB4AO15263 64 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 DEFB135Q30KP9 77 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 Q8IZM0 81 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 DNAH9Q9NYC9 4486 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
CTNNA1-238ENST00000523298 PRKDCP78527 4128 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-238ENST00000523298 NDUFA1O15239 70 aa1.79□□□□□ -2.12
CTNNA1-238ENST00000523298 HTN1P15515 57 aa1.79□□□□□ -2.12
CTNNA1-238ENST00000523298 SPINK13Q1W4C9 94 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms