RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.79
PVT1-217ENST00000523190 FAT1Q14517 4588 aa3.89□□□□□ -1.79
PVT1-217ENST00000523190 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
PVT1-217ENST00000523190 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
PVT1-217ENST00000523190 BPY2O14599 106 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 NDUFC1O43677 76 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
PVT1-217ENST00000523190 Q5XG85 94 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 Q96NJ1 140 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 KRTAP4-5Q9BYR2 181 aa3.88□□□□□ -1.79
PVT1-217ENST00000523190 Q8N9L7 120 aa3.87□□□□□ -1.79
PVT1-217ENST00000523190 LINC00472Q9H8W2 130 aa3.87□□□□□ -1.79
PVT1-217ENST00000523190 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
PVT1-217ENST00000523190 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 DSCR10P59022 87 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
PVT1-217ENST00000523190 K7EQZ3 153 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 SPINK1P00995 79 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
PVT1-217ENST00000523190 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
PVT1-217ENST00000523190 A8MWP4 228 aa3.83□□□□□ -1.8
PVT1-217ENST00000523190 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
PVT1-217ENST00000523190 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
PVT1-217ENST00000523190 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
PVT1-217ENST00000523190 OCR1Q9BZK8 76 aa3.83□□□□□ -1.8
PVT1-217ENST00000523190 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
PVT1-217ENST00000523190 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
PVT1-217ENST00000523190 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
PVT1-217ENST00000523190 PRR15Q8IV56 129 aa3.81□□□□□ -1.8
PVT1-217ENST00000523190 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
PVT1-217ENST00000523190 IGHV6-1A0A0B4J1U7 121 aa3.8□□□□□ -1.8
PVT1-217ENST00000523190 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
PVT1-217ENST00000523190 NDUFB1O75438 58 aa3.8□□□□□ -1.8
PVT1-217ENST00000523190 RETNLBQ9BQ08 111 aa3.8□□□□□ -1.8
PVT1-217ENST00000523190 MMP24-AS1A0A0U1RRL7 71 aa3.79□□□□□ -1.8
PVT1-217ENST00000523190 C4orf26Q17RF5 130 aa3.79□□□□□ -1.8
PVT1-217ENST00000523190 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
PVT1-217ENST00000523190 WFDC13Q8IUB5 93 aa3.79□□□□□ -1.8
PVT1-217ENST00000523190 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
PVT1-217ENST00000523190 HCG22E2RYF7 251 aa3.78□□□□□ -1.8
PVT1-217ENST00000523190 ZCCHC13Q8WW36 166 aaKnown RBP3.78□□□□□ -1.8
PVT1-217ENST00000523190 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
PVT1-217ENST00000523190 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
PVT1-217ENST00000523190 KRTAP29-1A8MX34 341 aaPredicted RBP3.77□□□□□ -1.81
PVT1-217ENST00000523190 XP32Q5T750 250 aa3.77□□□□□ -1.81
PVT1-217ENST00000523190 CASC2Q6XLA1 102 aa3.77□□□□□ -1.81
PVT1-217ENST00000523190 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
PVT1-217ENST00000523190 FLG2Q5D862 2391 aaPredicted RBP3.76□□□□□ -1.81
PVT1-217ENST00000523190 SNURFQ9Y675 71 aa3.76□□□□□ -1.81
PVT1-217ENST00000523190 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
PVT1-217ENST00000523190 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
PVT1-217ENST00000523190 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
PVT1-217ENST00000523190 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
PVT1-217ENST00000523190 HERC2O95714 4834 aa3.75□□□□□ -1.81
PVT1-217ENST00000523190 LINC00313P59037 77 aa3.74□□□□□ -1.81
PVT1-217ENST00000523190 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
PVT1-217ENST00000523190 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
PVT1-217ENST00000523190 TNXBP22105 4242 aa3.74□□□□□ -1.81
PVT1-217ENST00000523190 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
PVT1-217ENST00000523190 C9orf92A6NGG3 77 aa3.72□□□□□ -1.81
PVT1-217ENST00000523190 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
PVT1-217ENST00000523190 Q75L30 129 aa3.72□□□□□ -1.81
PVT1-217ENST00000523190 NDUFS5O43920 106 aa3.71□□□□□ -1.82
PVT1-217ENST00000523190 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
PVT1-217ENST00000523190 PRR4Q16378 134 aa3.7□□□□□ -1.82
PVT1-217ENST00000523190 H3BPC8 53 aa3.69□□□□□ -1.82
PVT1-217ENST00000523190 Q1T7F1 81 aa3.69□□□□□ -1.82
PVT1-217ENST00000523190 ABCA13Q86UQ4 5058 aa3.68□□□□□ -1.82
PVT1-217ENST00000523190 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
PVT1-217ENST00000523190 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
PVT1-217ENST00000523190 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
PVT1-217ENST00000523190 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
PVT1-217ENST00000523190 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
PVT1-217ENST00000523190 KRTAP13-3Q3SY46 172 aa3.66□□□□□ -1.82
PVT1-217ENST00000523190 TP53AIP1Q9HCN2 124 aa3.66□□□□□ -1.82
PVT1-217ENST00000523190 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
PVT1-217ENST00000523190 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
PVT1-217ENST00000523190 H0Y9P7 68 aa3.65□□□□□ -1.83
PVT1-217ENST00000523190 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
PVT1-217ENST00000523190 A8MUU9 505 aa3.64□□□□□ -1.83
PVT1-217ENST00000523190 Q5W150 140 aa3.64□□□□□ -1.83
PVT1-217ENST00000523190 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
PVT1-217ENST00000523190 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
PVT1-217ENST00000523190 MP68P56378 58 aa3.63□□□□□ -1.83
PVT1-217ENST00000523190 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
PVT1-217ENST00000523190 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
PVT1-217ENST00000523190 V9GYY9 64 aa3.62□□□□□ -1.83
PVT1-217ENST00000523190 RPL37P61927 97 aaKnown RBP3.61□□□□□ -1.83
PVT1-217ENST00000523190 IGKV2D-30A0A075B6S6 120 aa3.57□□□□□ -1.84
PVT1-217ENST00000523190 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
PVT1-217ENST00000523190 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
PVT1-217ENST00000523190 PCOTHQ58A44 107 aa3.57□□□□□ -1.84
PVT1-217ENST00000523190 ATP11AUNQ6ZP68 121 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms