RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
CSMD1-210ENST00000521646 C14orf144Q96I85 54 aa5.43□□□□□ -1.54
CSMD1-210ENST00000521646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-210ENST00000521646 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
CSMD1-210ENST00000521646 SMIM6P0DI80 62 aa5.41□□□□□ -1.54
CSMD1-210ENST00000521646 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
CSMD1-210ENST00000521646 A0A087WSZ3 146 aa5.4□□□□□ -1.54
CSMD1-210ENST00000521646 C2orf91Q6ZV80 131 aa5.4□□□□□ -1.54
CSMD1-210ENST00000521646 TRBV20-1A0A075B6N2 111 aa5.39□□□□□ -1.55
CSMD1-210ENST00000521646 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
CSMD1-210ENST00000521646 VAMP3Q15836 100 aa5.39□□□□□ -1.55
CSMD1-210ENST00000521646 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
CSMD1-210ENST00000521646 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
CSMD1-210ENST00000521646 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
CSMD1-210ENST00000521646 TEN1Q86WV5 123 aa5.36□□□□□ -1.55
CSMD1-210ENST00000521646 CEND1Q8N111 149 aa5.36□□□□□ -1.55
CSMD1-210ENST00000521646 PPDPFLQ8WWR9 84 aa5.36□□□□□ -1.55
CSMD1-210ENST00000521646 NEBP20929 6669 aa5.35□□□□□ -1.55
CSMD1-210ENST00000521646 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
CSMD1-210ENST00000521646 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
CSMD1-210ENST00000521646 NDUFV3P56181 108 aaKnown RBP5.35□□□□□ -1.55
CSMD1-210ENST00000521646 HSD52Q0P140 79 aa5.34□□□□□ -1.55
CSMD1-210ENST00000521646 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
CSMD1-210ENST00000521646 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
CSMD1-210ENST00000521646 BVES-AS1Q5T3Y7 98 aa5.32□□□□□ -1.56
CSMD1-210ENST00000521646 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
CSMD1-210ENST00000521646 SIGMAR1Q99720 223 aa5.32□□□□□ -1.56
CSMD1-210ENST00000521646 FXYD2P54710 66 aa5.31□□□□□ -1.56
CSMD1-210ENST00000521646 LINC00313P59037 77 aa5.31□□□□□ -1.56
CSMD1-210ENST00000521646 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
CSMD1-210ENST00000521646 PRO1854Q9UHT4 67 aa5.31□□□□□ -1.56
CSMD1-210ENST00000521646 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
CSMD1-210ENST00000521646 H0YGX0 51 aa5.3□□□□□ -1.56
CSMD1-210ENST00000521646 H3BMG7 143 aa5.3□□□□□ -1.56
CSMD1-210ENST00000521646 IGKV4-1P06312 121 aa5.29□□□□□ -1.56
CSMD1-210ENST00000521646 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
CSMD1-210ENST00000521646 RBM12B-AS1Q9P1G2 102 aa5.29□□□□□ -1.56
CSMD1-210ENST00000521646 A0A1B0GV72 72 aa5.28□□□□□ -1.56
CSMD1-210ENST00000521646 A0A1B0GV90 55 aa5.28□□□□□ -1.56
CSMD1-210ENST00000521646 A0A1B0GX51 115 aa5.28□□□□□ -1.56
CSMD1-210ENST00000521646 SNCGO76070 127 aa5.26□□□□□ -1.57
CSMD1-210ENST00000521646 IGHV6-1A0A0B4J1U7 121 aa5.25□□□□□ -1.57
CSMD1-210ENST00000521646 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
CSMD1-210ENST00000521646 M0R143 59 aa5.24□□□□□ -1.57
CSMD1-210ENST00000521646 FABP2P12104 132 aa5.24□□□□□ -1.57
CSMD1-210ENST00000521646 COX6CP09669 75 aa5.23□□□□□ -1.57
CSMD1-210ENST00000521646 SPINK7P58062 85 aa5.23□□□□□ -1.57
CSMD1-210ENST00000521646 TRBV7-4A0A0J9YYF1 115 aa5.22□□□□□ -1.57
CSMD1-210ENST00000521646 H3BQ85 93 aa5.21□□□□□ -1.58
CSMD1-210ENST00000521646 K7ERJ3 54 aa5.2□□□□□ -1.58
CSMD1-210ENST00000521646 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
CSMD1-210ENST00000521646 PSMB2P49721 201 aa5.19□□□□□ -1.58
CSMD1-210ENST00000521646 ANKRD29Q8N6D5 301 aa5.19□□□□□ -1.58
CSMD1-210ENST00000521646 A0A1B0GVX0 72 aa5.18□□□□□ -1.58
CSMD1-210ENST00000521646 TRACP01848 142 aa5.17□□□□□ -1.58
CSMD1-210ENST00000521646 WFDC13Q8IUB5 93 aa5.17□□□□□ -1.58
CSMD1-210ENST00000521646 A8MWP4 228 aa5.16□□□□□ -1.58
CSMD1-210ENST00000521646 CCKP06307 115 aa5.16□□□□□ -1.58
CSMD1-210ENST00000521646 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.59
CSMD1-210ENST00000521646 DNAL4O96015 105 aa5.15□□□□□ -1.59
CSMD1-210ENST00000521646 SCGB1C2P0DMR2 95 aa5.15□□□□□ -1.59
CSMD1-210ENST00000521646 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
CSMD1-210ENST00000521646 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
CSMD1-210ENST00000521646 ORMDL1Q9P0S3 153 aa5.14□□□□□ -1.59
CSMD1-210ENST00000521646 UBE2V1Q13404 147 aa5.13□□□□□ -1.59
CSMD1-210ENST00000521646 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
CSMD1-210ENST00000521646 C8orf87E5RJ46 101 aa5.12□□□□□ -1.59
CSMD1-210ENST00000521646 LYRM7Q5U5X0 104 aa5.12□□□□□ -1.59
CSMD1-210ENST00000521646 KMT2DO14686 5537 aa5.11□□□□□ -1.59
CSMD1-210ENST00000521646 MT1BP07438 61 aa5.1□□□□□ -1.59
CSMD1-210ENST00000521646 ATXN8Q156A1 80 aa5.1□□□□□ -1.59
CSMD1-210ENST00000521646 MTURNQ8N3F0 131 aa5.1□□□□□ -1.59
CSMD1-210ENST00000521646 VPS25Q9BRG1 176 aa5.09□□□□□ -1.59
CSMD1-210ENST00000521646 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
CSMD1-210ENST00000521646 BAALC-AS2P0C853 105 aa5.08□□□□□ -1.6
CSMD1-210ENST00000521646 BATFQ16520 125 aa5.08□□□□□ -1.6
CSMD1-210ENST00000521646 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
CSMD1-210ENST00000521646 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
CSMD1-210ENST00000521646 NAA38Q9BRA0 125 aaKnown RBP5.06□□□□□ -1.6
CSMD1-210ENST00000521646 C8orf17Q9NRJ1 99 aa5.06□□□□□ -1.6
CSMD1-210ENST00000521646 A0A1W2PPM0 123 aa5.05□□□□□ -1.6
CSMD1-210ENST00000521646 Q6ZQT0 140 aa5.05□□□□□ -1.6
CSMD1-210ENST00000521646 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
CSMD1-210ENST00000521646 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
CSMD1-210ENST00000521646 COL5A1-AS1Q5SY13 56 aa5.04□□□□□ -1.6
CSMD1-210ENST00000521646 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
CSMD1-210ENST00000521646 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
CSMD1-210ENST00000521646 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
CSMD1-210ENST00000521646 A0A1B0GW54 56 aa5.02□□□□□ -1.61
CSMD1-210ENST00000521646 SCGB1A1P11684 91 aa5.02□□□□□ -1.61
CSMD1-210ENST00000521646 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
CSMD1-210ENST00000521646 H3BT86 120 aa5.01□□□□□ -1.61
CSMD1-210ENST00000521646 PDE6GP18545 87 aa5.01□□□□□ -1.61
CSMD1-210ENST00000521646 LOC110117498A0A087WWA1 95 aa5□□□□□ -1.61
CSMD1-210ENST00000521646 C9JAW5 83 aa5□□□□□ -1.61
CSMD1-210ENST00000521646 KRTAP5-9P26371 169 aa5□□□□□ -1.61
CSMD1-210ENST00000521646 Q6ZVQ6 151 aa5□□□□□ -1.61
CSMD1-210ENST00000521646 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
CSMD1-210ENST00000521646 A6NN06 94 aa4.99□□□□□ -1.61
CSMD1-210ENST00000521646 J3KT08 172 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms