RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 DNAH2Q9P225 4427 aa4□□□□□ -1.77
CTNNA1-228ENST00000521640 IGLV9-49A0A0B4J1Y8 123 aa3.99□□□□□ -1.77
CTNNA1-228ENST00000521640 NDUFB1O75438 58 aa3.99□□□□□ -1.77
CTNNA1-228ENST00000521640 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
CTNNA1-228ENST00000521640 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
CTNNA1-228ENST00000521640 A0A0G2JQZ4 141 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 A0A0U1RQV1 116 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 H7BZZ5 65 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 MOBPQ13875 183 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
CTNNA1-228ENST00000521640 H3BPC8 53 aa3.97□□□□□ -1.77
CTNNA1-228ENST00000521640 Q5XG85 94 aa3.97□□□□□ -1.77
CTNNA1-228ENST00000521640 Q96NJ1 140 aa3.97□□□□□ -1.77
CTNNA1-228ENST00000521640 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
CTNNA1-228ENST00000521640 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
CTNNA1-228ENST00000521640 KMT2AQ03164 3969 aa3.96□□□□□ -1.78
CTNNA1-228ENST00000521640 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
CTNNA1-228ENST00000521640 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
CTNNA1-228ENST00000521640 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
CTNNA1-228ENST00000521640 TGP01266 2768 aa3.94□□□□□ -1.78
CTNNA1-228ENST00000521640 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
CTNNA1-228ENST00000521640 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
CTNNA1-228ENST00000521640 ZCCHC13Q8WW36 166 aaKnown RBP3.94□□□□□ -1.78
CTNNA1-228ENST00000521640 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
CTNNA1-228ENST00000521640 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
CTNNA1-228ENST00000521640 CDK2AP2O75956 126 aa3.93□□□□□ -1.78
CTNNA1-228ENST00000521640 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
CTNNA1-228ENST00000521640 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
CTNNA1-228ENST00000521640 A0A1B0GVY2 172 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 C8orf87E5RJ46 101 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 MP68P56378 58 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 SPINK6Q6UWN8 80 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 C8orf17Q9NRJ1 99 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
CTNNA1-228ENST00000521640 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
CTNNA1-228ENST00000521640 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-228ENST00000521640 LIMD2Q9BT23 127 aa3.91□□□□□ -1.78
CTNNA1-228ENST00000521640 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
CTNNA1-228ENST00000521640 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
CTNNA1-228ENST00000521640 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.79
CTNNA1-228ENST00000521640 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
CTNNA1-228ENST00000521640 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
CTNNA1-228ENST00000521640 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
CTNNA1-228ENST00000521640 FAT2Q9NYQ8 4349 aa3.89□□□□□ -1.79
CTNNA1-228ENST00000521640 A0A087X002 238 aa3.88□□□□□ -1.79
CTNNA1-228ENST00000521640 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
CTNNA1-228ENST00000521640 SPANXA2-OT1Q8N9U9 137 aa3.88□□□□□ -1.79
CTNNA1-228ENST00000521640 MRPL34Q9BQ48 92 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-228ENST00000521640 SRRM2Q9UQ35 2752 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-228ENST00000521640 PKD1P98161 4303 aa3.87□□□□□ -1.79
CTNNA1-228ENST00000521640 H0Y9P7 68 aa3.87□□□□□ -1.79
CTNNA1-228ENST00000521640 SPINK1P00995 79 aa3.87□□□□□ -1.79
CTNNA1-228ENST00000521640 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
CTNNA1-228ENST00000521640 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
CTNNA1-228ENST00000521640 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
CTNNA1-228ENST00000521640 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
CTNNA1-228ENST00000521640 SMIM26A0A096LP01 95 aa3.84□□□□□ -1.79
CTNNA1-228ENST00000521640 C1orf195Q5TG92 126 aa3.84□□□□□ -1.79
CTNNA1-228ENST00000521640 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
CTNNA1-228ENST00000521640 TYMSOSQ8TAI1 123 aa3.84□□□□□ -1.79
CTNNA1-228ENST00000521640 KRTAP10-4P60372 401 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-228ENST00000521640 SACSQ9NZJ4 4579 aa3.83□□□□□ -1.8
CTNNA1-228ENST00000521640 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
CTNNA1-228ENST00000521640 OXTP01178 125 aa3.82□□□□□ -1.8
CTNNA1-228ENST00000521640 LINC00313P59037 77 aa3.82□□□□□ -1.8
CTNNA1-228ENST00000521640 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
CTNNA1-228ENST00000521640 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
CTNNA1-228ENST00000521640 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
CTNNA1-228ENST00000521640 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
CTNNA1-228ENST00000521640 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
CTNNA1-228ENST00000521640 NDUFS5O43920 106 aa3.8□□□□□ -1.8
CTNNA1-228ENST00000521640 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
CTNNA1-228ENST00000521640 KRTAP16-1A8MUX0 517 aa3.79□□□□□ -1.8
CTNNA1-228ENST00000521640 RYR2Q92736 4967 aa3.77□□□□□ -1.81
CTNNA1-228ENST00000521640 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-228ENST00000521640 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-228ENST00000521640 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-228ENST00000521640 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
CTNNA1-228ENST00000521640 Q5W150 140 aa3.74□□□□□ -1.81
CTNNA1-228ENST00000521640 V9GYY9 64 aa3.74□□□□□ -1.81
CTNNA1-228ENST00000521640 Q1T7F1 81 aa3.73□□□□□ -1.81
CTNNA1-228ENST00000521640 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
CTNNA1-228ENST00000521640 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
CTNNA1-228ENST00000521640 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
CTNNA1-228ENST00000521640 C20orf166-AS1Q96NR2 134 aa3.71□□□□□ -1.82
CTNNA1-228ENST00000521640 PRR4Q16378 134 aa3.7□□□□□ -1.82
CTNNA1-228ENST00000521640 COA5Q86WW8 74 aa3.7□□□□□ -1.82
CTNNA1-228ENST00000521640 A8MUU9 505 aa3.69□□□□□ -1.82
CTNNA1-228ENST00000521640 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
CTNNA1-228ENST00000521640 C4orf26Q17RF5 130 aa3.69□□□□□ -1.82
CTNNA1-228ENST00000521640 Q5VSD8 79 aa3.69□□□□□ -1.82
CTNNA1-228ENST00000521640 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
CTNNA1-228ENST00000521640 ACYP2P14621 99 aa3.68□□□□□ -1.82
CTNNA1-228ENST00000521640 PKHD1L1Q86WI1 4243 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms