RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 Q75L30 129 aa4.63□□□□□ -1.67
NPIPB3-205ENST00000521589 H3BQ85 93 aa4.62□□□□□ -1.67
NPIPB3-205ENST00000521589 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
NPIPB3-205ENST00000521589 OBSCN-AS1Q96MR7 158 aa4.61□□□□□ -1.67
NPIPB3-205ENST00000521589 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
NPIPB3-205ENST00000521589 MT-ATP8P03928 68 aa4.6□□□□□ -1.67
NPIPB3-205ENST00000521589 NDUFV3P56181 108 aaKnown RBP4.6□□□□□ -1.67
NPIPB3-205ENST00000521589 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
NPIPB3-205ENST00000521589 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
NPIPB3-205ENST00000521589 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
NPIPB3-205ENST00000521589 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
NPIPB3-205ENST00000521589 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
NPIPB3-205ENST00000521589 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
NPIPB3-205ENST00000521589 RBM3P98179 157 aaKnown RBP4.57□□□□□ -1.68
NPIPB3-205ENST00000521589 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
NPIPB3-205ENST00000521589 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
NPIPB3-205ENST00000521589 A0A087WSZ3 146 aa4.56□□□□□ -1.68
NPIPB3-205ENST00000521589 Q96NJ1 140 aa4.56□□□□□ -1.68
NPIPB3-205ENST00000521589 A8MUU9 505 aa4.55□□□□□ -1.68
NPIPB3-205ENST00000521589 M0R2T5 61 aa4.55□□□□□ -1.68
NPIPB3-205ENST00000521589 DSCR8Q96T75 97 aa4.55□□□□□ -1.68
NPIPB3-205ENST00000521589 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
NPIPB3-205ENST00000521589 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
NPIPB3-205ENST00000521589 LOC110117498A0A087WWA1 95 aa4.53□□□□□ -1.68
NPIPB3-205ENST00000521589 TRBV7-4A0A0J9YYF1 115 aa4.53□□□□□ -1.68
NPIPB3-205ENST00000521589 ACYP1P07311 99 aa4.53□□□□□ -1.68
NPIPB3-205ENST00000521589 Q6ZQT0 140 aa4.52□□□□□ -1.69
NPIPB3-205ENST00000521589 CCKP06307 115 aa4.51□□□□□ -1.69
NPIPB3-205ENST00000521589 PDE6GP18545 87 aa4.51□□□□□ -1.69
NPIPB3-205ENST00000521589 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
NPIPB3-205ENST00000521589 DSCR10P59022 87 aa4.49□□□□□ -1.69
NPIPB3-205ENST00000521589 LINC00472Q9H8W2 130 aa4.48□□□□□ -1.69
NPIPB3-205ENST00000521589 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
NPIPB3-205ENST00000521589 LINC00313P59037 77 aa4.47□□□□□ -1.69
NPIPB3-205ENST00000521589 LINC00643Q86TS7 51 aa4.47□□□□□ -1.69
NPIPB3-205ENST00000521589 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
NPIPB3-205ENST00000521589 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
NPIPB3-205ENST00000521589 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
NPIPB3-205ENST00000521589 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
NPIPB3-205ENST00000521589 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
NPIPB3-205ENST00000521589 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
NPIPB3-205ENST00000521589 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
NPIPB3-205ENST00000521589 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
NPIPB3-205ENST00000521589 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
NPIPB3-205ENST00000521589 A0A1B0GW54 56 aa4.42□□□□□ -1.7
NPIPB3-205ENST00000521589 NREPQ16612 68 aa4.42□□□□□ -1.7
NPIPB3-205ENST00000521589 DEFB116Q30KQ4 102 aa4.42□□□□□ -1.7
NPIPB3-205ENST00000521589 Q6ZVQ6 151 aa4.42□□□□□ -1.7
NPIPB3-205ENST00000521589 IGHV6-1A0A0B4J1U7 121 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 ATOX1O00244 68 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 HRES1P13985 223 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 USH2AO75445 5202 aa4.41□□□□□ -1.7
NPIPB3-205ENST00000521589 J3KT08 172 aa4.39□□□□□ -1.71
NPIPB3-205ENST00000521589 UQCRQO14949 82 aa4.39□□□□□ -1.71
NPIPB3-205ENST00000521589 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
NPIPB3-205ENST00000521589 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
NPIPB3-205ENST00000521589 IGKV3D-7A0A0C4DH55 119 aa4.37□□□□□ -1.71
NPIPB3-205ENST00000521589 FAM236DA0A1B0GTK5 79 aa4.37□□□□□ -1.71
NPIPB3-205ENST00000521589 BPY2O14599 106 aa4.37□□□□□ -1.71
NPIPB3-205ENST00000521589 FAM236CP0DP71 79 aa4.37□□□□□ -1.71
NPIPB3-205ENST00000521589 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
NPIPB3-205ENST00000521589 MT2AP02795 61 aa4.36□□□□□ -1.71
NPIPB3-205ENST00000521589 COX7CP15954 63 aa4.36□□□□□ -1.71
NPIPB3-205ENST00000521589 SMIM20Q8N5G0 67 aa4.36□□□□□ -1.71
NPIPB3-205ENST00000521589 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
NPIPB3-205ENST00000521589 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
NPIPB3-205ENST00000521589 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
NPIPB3-205ENST00000521589 CXCL6P80162 114 aa4.34□□□□□ -1.71
NPIPB3-205ENST00000521589 Q8N9L7 120 aa4.34□□□□□ -1.71
NPIPB3-205ENST00000521589 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
NPIPB3-205ENST00000521589 A8MWP4 228 aa4.33□□□□□ -1.72
NPIPB3-205ENST00000521589 NDUFB1O75438 58 aa4.33□□□□□ -1.72
NPIPB3-205ENST00000521589 K7EQZ3 153 aa4.32□□□□□ -1.72
NPIPB3-205ENST00000521589 MT1FP04733 61 aa4.32□□□□□ -1.72
NPIPB3-205ENST00000521589 SPINK7P58062 85 aa4.32□□□□□ -1.72
NPIPB3-205ENST00000521589 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
NPIPB3-205ENST00000521589 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
NPIPB3-205ENST00000521589 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
NPIPB3-205ENST00000521589 TMEM258P61165 79 aa4.3□□□□□ -1.72
NPIPB3-205ENST00000521589 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
NPIPB3-205ENST00000521589 A0A087WVE0 104 aa4.29□□□□□ -1.72
NPIPB3-205ENST00000521589 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
NPIPB3-205ENST00000521589 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
NPIPB3-205ENST00000521589 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
NPIPB3-205ENST00000521589 WFDC13Q8IUB5 93 aa4.26□□□□□ -1.73
NPIPB3-205ENST00000521589 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
NPIPB3-205ENST00000521589 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
NPIPB3-205ENST00000521589 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
NPIPB3-205ENST00000521589 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
NPIPB3-205ENST00000521589 CASC2Q6XLA1 102 aa4.24□□□□□ -1.73
NPIPB3-205ENST00000521589 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
NPIPB3-205ENST00000521589 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
NPIPB3-205ENST00000521589 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
NPIPB3-205ENST00000521589 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
NPIPB3-205ENST00000521589 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
NPIPB3-205ENST00000521589 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
NPIPB3-205ENST00000521589 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
NPIPB3-205ENST00000521589 NDUFS5O43920 106 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms