RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SS18L2Q9UHA2 77 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 UBE2D4Q9Y2X8 147 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 H3BQ85 93 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 CCDC179H3BU77 68 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 DNAL4O96015 105 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 CRPP02741 224 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
VPS13B-208ENST00000521037 ATP5EP2Q5VTU8 51 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 C5orf38Q86SI9 138 aa2.09□□□□□ -2.07
VPS13B-208ENST00000521037 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 FAM236AA0A1B0GUQ0 79 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 FAM236BA0A1B0GV22 79 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 J3KT08 172 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 BCE1O60756 84 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 IGLV7-43P04211 117 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 COX7CP15954 63 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 TMEM258P61165 79 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 HIST1H4AP62805 103 aaKnown RBP2.08□□□□□ -2.08
VPS13B-208ENST00000521037 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 C9orf153Q5TBE3 101 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 SMIM20Q8N5G0 67 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 CLEC2BQ92478 149 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 ZNF625Q96I27 306 aaPredicted RBP2.08□□□□□ -2.08
VPS13B-208ENST00000521037 CDKN2A-AS1Q9UH64 79 aa2.08□□□□□ -2.08
VPS13B-208ENST00000521037 IGLV10-54A0A075B6I4 117 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 TRBV10-3A0A0K0K1G6 114 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 JMJD7-PLA2G4BH0Y9G9 81 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 UBE2L6O14933 153 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 MT2AP02795 61 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 PMAIP1Q13794 54 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 Q6JHZ5 121 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 MIR7-3HGQ8N6C7 128 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 OR13C6PQ8NH95 151 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 OBSCN-AS1Q96MR7 158 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 CDC42SE2Q9NRR3 84 aa2.07□□□□□ -2.08
VPS13B-208ENST00000521037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.06□□□□□ -2.08
VPS13B-208ENST00000521037 IGHV3-73A0A0B4J1V6 119 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 IGKV2-29A2NJV5 120 aaPredicted RBP2.06□□□□□ -2.08
VPS13B-208ENST00000521037 MT1FP04733 61 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 PDE6GP18545 87 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 COX7B2Q8TF08 81 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 DIRC1Q969H9 104 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 DPH3Q96FX2 82 aa2.06□□□□□ -2.08
VPS13B-208ENST00000521037 hADV29S1A0JD25 119 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 TMEM256-PLSCR3K7ERE1 68 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 K7ERS5 55 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 NDUFC2O95298 119 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 LINC00313P59037 77 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 COX17Q14061 63 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 C1orf137Q5JT78 98 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 PHF5AQ7RTV0 110 aaKnown RBP2.05□□□□□ -2.08
VPS13B-208ENST00000521037 LINC00167Q96N53 147 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 ANAPC11Q9NYG5 84 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 ORMDL1Q9P0S3 153 aa2.05□□□□□ -2.08
VPS13B-208ENST00000521037 TRAV13-1A0A0B4J241 112 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 A8MU10 97 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 CCKP06307 115 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 LINC00158P58513 81 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 NPC2P61916 151 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 SOSTDC1Q6X4U4 206 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 Q8IZM0 81 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 SMIM11BQ8TCY0 68 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 SMCR5Q8TEV8 140 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 UBL5Q9BZL1 73 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 C22orf24Q9Y442 160 aa2.04□□□□□ -2.08
VPS13B-208ENST00000521037 IGKV2-28A0A075B6P5 120 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 TRBV6-8A0A0A6YYG3 113 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 LOC107984640A0A0U1RRK4 108 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 NDUFC1O43677 76 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 IGKV2D-28P01615 120 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 ATP5EP56381 51 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-208ENST00000521037 SS18Q15532 418 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 CLPSL2Q6UWE3 100 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 LINC00269Q8N2A0 174 aa2.03□□□□□ -2.08
VPS13B-208ENST00000521037 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
VPS13B-208ENST00000521037 LOC110117498A0A087WWA1 95 aa2.02□□□□□ -2.09
VPS13B-208ENST00000521037 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-208ENST00000521037 ST20-AS1Q8NBB2 130 aa2.02□□□□□ -2.09
VPS13B-208ENST00000521037 C14orf132Q9NPU4 83 aa2.02□□□□□ -2.09
VPS13B-208ENST00000521037 LINC00846Q9NV44 126 aa2.02□□□□□ -2.09
VPS13B-208ENST00000521037 IGLV4-60A0A075B6I1 120 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 TRBV7-6A0A0J9YX20 115 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 A0A1B0GW54 56 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 ERC2-IT1O76042 136 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 ANGP03950 147 aaKnown RBP2.01□□□□□ -2.09
VPS13B-208ENST00000521037 RBM3P98179 157 aaKnown RBP2.01□□□□□ -2.09
VPS13B-208ENST00000521037 C9orf116Q5BN46 136 aaPredicted RBP2.01□□□□□ -2.09
VPS13B-208ENST00000521037 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
VPS13B-208ENST00000521037 IGKV3D-7A0A0C4DH55 119 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 A8MWP4 228 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 M0R2T5 61 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 NCR3O14931 201 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 KLKP1Q107X0 134 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 LINC00575Q6W349 94 aa2□□□□□ -2.09
VPS13B-208ENST00000521037 Q8N9L7 120 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms