RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 RIF1Q5UIP0 2472 aaKnown RBP-0.2□□□□□ -2.44
PTPN12-214ENST00000520947 CCDC180Q9P1Z9 1646 aa-0.2□□□□□ -2.44
PTPN12-214ENST00000520947 SVEP1Q4LDE5 3571 aa-0.2□□□□□ -2.44
PTPN12-214ENST00000520947 LYSTQ99698 3801 aa-0.21□□□□□ -2.44
PTPN12-214ENST00000520947 COL6A5A8TX70 2615 aa-0.21□□□□□ -2.44
PTPN12-214ENST00000520947 ZZEF1O43149 2961 aa-0.21□□□□□ -2.44
PTPN12-214ENST00000520947 SPG11Q96JI7 2443 aa-0.21□□□□□ -2.44
PTPN12-214ENST00000520947 HERC2O95714 4834 aa-0.21□□□□□ -2.44
PTPN12-214ENST00000520947 PKD1P98161 4303 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 K7EMI3 77 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 WT1-ASQ06250 92 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 KRTAP19-7Q3SYF9 63 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 C6orf48Q9UBA6 75 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 KIF1AQ12756 1690 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 PKD1L2Q7Z442 2459 aa-0.22□□□□□ -2.44
PTPN12-214ENST00000520947 ANKRD11Q6UB99 2663 aaPredicted RBP-0.23□□□□□ -2.45
PTPN12-214ENST00000520947 RPS27P42677 84 aaKnown RBP-0.23□□□□□ -2.45
PTPN12-214ENST00000520947 RPS27LQ71UM5 84 aaKnown RBP-0.23□□□□□ -2.45
PTPN12-214ENST00000520947 GCN1Q92616 2671 aaKnown RBP-0.24□□□□□ -2.45
PTPN12-214ENST00000520947 HTTP42858 3142 aa-0.24□□□□□ -2.45
PTPN12-214ENST00000520947 ABCA6Q8N139 1617 aa-0.24□□□□□ -2.45
PTPN12-214ENST00000520947 MXRA5Q9NR99 2828 aa-0.24□□□□□ -2.45
PTPN12-214ENST00000520947 SMIM31A0A1B0GVY4 71 aa-0.25□□□□□ -2.45
PTPN12-214ENST00000520947 NCBP2-AS2Q69YL0 99 aa-0.25□□□□□ -2.45
PTPN12-214ENST00000520947 CLASP1Q7Z460 1538 aa-0.25□□□□□ -2.45
PTPN12-214ENST00000520947 NBPF19A0A087WUL8 3843 aa-0.25□□□□□ -2.45
PTPN12-214ENST00000520947 FAT1Q14517 4588 aa-0.25□□□□□ -2.45
PTPN12-214ENST00000520947 STARD9Q9P2P6 4700 aa-0.26□□□□□ -2.45
PTPN12-214ENST00000520947 MTORP42345 2549 aa-0.26□□□□□ -2.45
PTPN12-214ENST00000520947 LAMA5O15230 3695 aa-0.26□□□□□ -2.45
PTPN12-214ENST00000520947 MYO18BQ8IUG5 2567 aa-0.27□□□□□ -2.45
PTPN12-214ENST00000520947 DNHD1Q96M86 4753 aa-0.27□□□□□ -2.45
PTPN12-214ENST00000520947 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.27□□□□□ -2.45
PTPN12-214ENST00000520947 FASNP49327 2511 aaKnown RBP-0.27□□□□□ -2.45
PTPN12-214ENST00000520947 DMXL1Q9Y485 3027 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 H3BUA1 57 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 MT1AP04731 61 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 FCER1GP30273 86 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 SERF2P84101 59 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 ANKRD36CQ5JPF3 1778 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 CUBNO60494 3623 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 TIAM1Q13009 1591 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 ABCA10Q8WWZ4 1543 aa-0.28□□□□□ -2.45
PTPN12-214ENST00000520947 VPS13BQ7Z7G8 4022 aa-0.29□□□□□ -2.46
PTPN12-214ENST00000520947 LY75O60449 1722 aa-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 TACC2O95359 2948 aa-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 UTP20O75691 2785 aaKnown RBP-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 AKAP9Q99996 3911 aa-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 SPRR2FQ96RM1 72 aa-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 TOGARAM1Q9Y4F4 1720 aa-0.3□□□□□ -2.46
PTPN12-214ENST00000520947 ERICH3Q5RHP9 1530 aa-0.31□□□□□ -2.46
PTPN12-214ENST00000520947 S100ZQ8WXG8 99 aa-0.31□□□□□ -2.46
PTPN12-214ENST00000520947 LRRK2Q5S007 2527 aa-0.31□□□□□ -2.46
PTPN12-214ENST00000520947 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
PTPN12-214ENST00000520947 USP9XQ93008 2570 aaPredicted RBP-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 ITPR3Q14573 2671 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 M0R1W7 72 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 KRTAP19-8Q3LI54 63 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 KRTAP20-1Q3LI63 56 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 NMES1Q9C002 83 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 GLI2P10070 1586 aa-0.32□□□□□ -2.46
PTPN12-214ENST00000520947 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
PTPN12-214ENST00000520947 SMIM5Q71RC9 77 aa-0.33□□□□□ -2.46
PTPN12-214ENST00000520947 COL12A1Q99715 3063 aa-0.33□□□□□ -2.46
PTPN12-214ENST00000520947 SFTA3P0C7M3 94 aa-0.34□□□□□ -2.46
PTPN12-214ENST00000520947 CROCC2H7BZ55 1655 aa-0.34□□□□□ -2.46
PTPN12-214ENST00000520947 KALRNO60229 2985 aa-0.34□□□□□ -2.46
PTPN12-214ENST00000520947 BIRC6Q9NR09 4857 aa-0.35□□□□□ -2.46
PTPN12-214ENST00000520947 CDC42BPAQ5VT25 1732 aa-0.35□□□□□ -2.47
PTPN12-214ENST00000520947 WDR87Q6ZQQ6 2873 aa-0.35□□□□□ -2.47
PTPN12-214ENST00000520947 PKHD1L1Q86WI1 4243 aa-0.36□□□□□ -2.47
PTPN12-214ENST00000520947 IGLV5-48A0A075B6I7 105 aa-0.36□□□□□ -2.47
PTPN12-214ENST00000520947 NBEAQ8NFP9 2946 aa-0.36□□□□□ -2.47
PTPN12-214ENST00000520947 MGAM2Q2M2H8 2515 aa-0.36□□□□□ -2.47
PTPN12-214ENST00000520947 EEA1Q15075 1411 aa-0.37□□□□□ -2.47
PTPN12-214ENST00000520947 ANK3Q12955 4377 aaKnown RBP-0.37□□□□□ -2.47
PTPN12-214ENST00000520947 ALS2Q96Q42 1657 aa-0.37□□□□□ -2.47
PTPN12-214ENST00000520947 LAMA2P24043 3122 aaKnown RBP-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 FAM186AA6NE01 2351 aa-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 CPS1P31327 1500 aa-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 IGIPA6NJ69 53 aa-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 KRTAP20-2Q3LI61 65 aa-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 NOP10Q9NPE3 64 aaKnown RBP-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 TMEM167BQ9NRX6 74 aa-0.38□□□□□ -2.47
PTPN12-214ENST00000520947 APOBP04114 4563 aaKnown RBP-0.39□□□□□ -2.47
PTPN12-214ENST00000520947 MAST1Q9Y2H9 1570 aa-0.39□□□□□ -2.47
PTPN12-214ENST00000520947 LAMA1P25391 3075 aa-0.39□□□□□ -2.47
PTPN12-214ENST00000520947 ACACAQ13085 2346 aa-0.39□□□□□ -2.47
PTPN12-214ENST00000520947 UGGT1Q9NYU2 1555 aa-0.4□□□□□ -2.47
PTPN12-214ENST00000520947 VPS13DQ5THJ4 4388 aa-0.4□□□□□ -2.47
PTPN12-214ENST00000520947 ITPR1Q14643 2758 aa-0.4□□□□□ -2.47
PTPN12-214ENST00000520947 DEFB110Q30KQ9 67 aa-0.4□□□□□ -2.47
PTPN12-214ENST00000520947 CCDC168Q8NDH2 2452 aa-0.4□□□□□ -2.47
PTPN12-214ENST00000520947 PRXQ9BXM0 1461 aa-0.41□□□□□ -2.47
PTPN12-214ENST00000520947 RANBP2P49792 3224 aaKnown RBP-0.41□□□□□ -2.48
PTPN12-214ENST00000520947 ACACBO00763 2458 aa-0.41□□□□□ -2.48
PTPN12-214ENST00000520947 MUC17Q685J3 4493 aa-0.42□□□□□ -2.48
PTPN12-214ENST00000520947 SACSQ9NZJ4 4579 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms