RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
CTNNA1-219ENST00000520158 IGIPA6NJ69 53 aa3.45□□□□□ -1.86
CTNNA1-219ENST00000520158 SCGB3A1Q96QR1 104 aa3.45□□□□□ -1.86
CTNNA1-219ENST00000520158 CAMK2N2Q96S95 79 aa3.45□□□□□ -1.86
CTNNA1-219ENST00000520158 PSORS1C2Q9UIG4 136 aa3.45□□□□□ -1.86
CTNNA1-219ENST00000520158 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
CTNNA1-219ENST00000520158 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 IGLV7-43P04211 117 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 SPAG11BQ08648 103 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 C1orf64Q8NEQ6 169 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 AMELXQ99217 191 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
CTNNA1-219ENST00000520158 NDUFA1O15239 70 aa3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 RPL39P62891 51 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
CTNNA1-219ENST00000520158 IGLV1-50A0A075B6I6 118 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 A6NED7 52 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
CTNNA1-219ENST00000520158 NREPQ16612 68 aa3.4□□□□□ -1.87
CTNNA1-219ENST00000520158 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-219ENST00000520158 UBL5Q9BZL1 73 aa3.4□□□□□ -1.87
CTNNA1-219ENST00000520158 IGLV4-3A0A075B6K6 122 aa3.39□□□□□ -1.87
CTNNA1-219ENST00000520158 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
CTNNA1-219ENST00000520158 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
CTNNA1-219ENST00000520158 LPAP08519 4548 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 A0A0J9YXY3 114 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 ROMO1P60602 79 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 C2orf66Q6UXQ4 117 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 Q8IZM0 81 aa3.38□□□□□ -1.87
CTNNA1-219ENST00000520158 ZNF861PO60384 105 aa3.37□□□□□ -1.87
CTNNA1-219ENST00000520158 C14orf132Q9NPU4 83 aa3.37□□□□□ -1.87
CTNNA1-219ENST00000520158 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
CTNNA1-219ENST00000520158 LITAFQ99732 161 aa3.36□□□□□ -1.87
CTNNA1-219ENST00000520158 JMJD7-PLA2G4BH0Y9G9 81 aa3.35□□□□□ -1.87
CTNNA1-219ENST00000520158 Q8NDZ9 215 aa3.35□□□□□ -1.87
CTNNA1-219ENST00000520158 MUC2Q02817 5179 aa3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 IGLV5-45A0A087WSX0 123 aa3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 Q9BRP9 147 aa3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.87
CTNNA1-219ENST00000520158 BPY2O14599 106 aa3.33□□□□□ -1.88
CTNNA1-219ENST00000520158 KRTAP13-1Q8IUC0 172 aa3.33□□□□□ -1.88
CTNNA1-219ENST00000520158 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-219ENST00000520158 OCR1Q9BZK8 76 aa3.33□□□□□ -1.88
CTNNA1-219ENST00000520158 SMIM1B2RUZ4 78 aa3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 H0YGX0 51 aa3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 LINC01547P58512 204 aaPredicted RBP3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 HIGD2AQ9BW72 106 aa3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
CTNNA1-219ENST00000520158 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-219ENST00000520158 PRR4Q16378 134 aa3.31□□□□□ -1.88
CTNNA1-219ENST00000520158 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
CTNNA1-219ENST00000520158 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
CTNNA1-219ENST00000520158 NDUFB1O75438 58 aa3.3□□□□□ -1.88
CTNNA1-219ENST00000520158 Q6ZQT0 140 aa3.3□□□□□ -1.88
CTNNA1-219ENST00000520158 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
CTNNA1-219ENST00000520158 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
CTNNA1-219ENST00000520158 IGLV5-39A0A0G2JS06 123 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 NCR3O14931 201 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 COX17Q14061 63 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 KRTAP13-2Q52LG2 175 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 TYMSOSQ8TAI1 123 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
CTNNA1-219ENST00000520158 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
CTNNA1-219ENST00000520158 K7ERS5 55 aa3.28□□□□□ -1.88
CTNNA1-219ENST00000520158 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
CTNNA1-219ENST00000520158 LOC110117498A0A087WWA1 95 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 A8MWP4 228 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 P0C880 135 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 PDE6GP18545 87 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 LINC00208Q96KT6 92 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
CTNNA1-219ENST00000520158 A0A087WSZ3 146 aa3.26□□□□□ -1.89
CTNNA1-219ENST00000520158 SPAG11AQ6PDA7 123 aa3.26□□□□□ -1.89
CTNNA1-219ENST00000520158 LINC00304Q8N9R0 145 aa3.26□□□□□ -1.89
CTNNA1-219ENST00000520158 LINC00308Q8TCZ7 52 aa3.26□□□□□ -1.89
CTNNA1-219ENST00000520158 ANAPC11Q9NYG5 84 aa3.26□□□□□ -1.89
CTNNA1-219ENST00000520158 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
CTNNA1-219ENST00000520158 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
CTNNA1-219ENST00000520158 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms