RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 KRTAP5-9P26371 169 aa5.7□□□□□ -1.5
TRAPPC9-204ENST00000518723 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
TRAPPC9-204ENST00000518723 A0A1B0GV72 72 aa5.67□□□□□ -1.5
TRAPPC9-204ENST00000518723 H3BQ85 93 aa5.67□□□□□ -1.5
TRAPPC9-204ENST00000518723 J3KT08 172 aa5.65□□□□□ -1.5
TRAPPC9-204ENST00000518723 COX8AP10176 69 aa5.65□□□□□ -1.5
TRAPPC9-204ENST00000518723 ORMDL1Q9P0S3 153 aa5.65□□□□□ -1.5
TRAPPC9-204ENST00000518723 TMA7Q9Y2S6 64 aaKnown RBP5.65□□□□□ -1.5
TRAPPC9-204ENST00000518723 DLEU1O43261 78 aa5.64□□□□□ -1.51
TRAPPC9-204ENST00000518723 MT1BP07438 61 aa5.64□□□□□ -1.51
TRAPPC9-204ENST00000518723 TMEM256-PLSCR3K7ERE1 68 aa5.63□□□□□ -1.51
TRAPPC9-204ENST00000518723 DNAL4O96015 105 aa5.63□□□□□ -1.51
TRAPPC9-204ENST00000518723 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
TRAPPC9-204ENST00000518723 TRIAP1O43715 76 aa5.62□□□□□ -1.51
TRAPPC9-204ENST00000518723 LYRM7Q5U5X0 104 aa5.62□□□□□ -1.51
TRAPPC9-204ENST00000518723 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
TRAPPC9-204ENST00000518723 HIST3H2BBQ8N257 126 aa5.61□□□□□ -1.51
TRAPPC9-204ENST00000518723 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
TRAPPC9-204ENST00000518723 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
TRAPPC9-204ENST00000518723 PRO1854Q9UHT4 67 aa5.61□□□□□ -1.51
TRAPPC9-204ENST00000518723 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
TRAPPC9-204ENST00000518723 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
TRAPPC9-204ENST00000518723 Q5VV11 94 aa5.6□□□□□ -1.51
TRAPPC9-204ENST00000518723 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
TRAPPC9-204ENST00000518723 NDUFB1O75438 58 aa5.59□□□□□ -1.51
TRAPPC9-204ENST00000518723 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
TRAPPC9-204ENST00000518723 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
TRAPPC9-204ENST00000518723 S100A2P29034 98 aa5.58□□□□□ -1.52
TRAPPC9-204ENST00000518723 C21orf62-AS1Q17RA5 79 aa5.58□□□□□ -1.52
TRAPPC9-204ENST00000518723 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
TRAPPC9-204ENST00000518723 VPS25Q9BRG1 176 aa5.58□□□□□ -1.52
TRAPPC9-204ENST00000518723 Q6ZQT0 140 aa5.55□□□□□ -1.52
TRAPPC9-204ENST00000518723 CEND1Q8N111 149 aa5.55□□□□□ -1.52
TRAPPC9-204ENST00000518723 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
TRAPPC9-204ENST00000518723 S100A6P06703 90 aa5.54□□□□□ -1.52
TRAPPC9-204ENST00000518723 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
TRAPPC9-204ENST00000518723 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
TRAPPC9-204ENST00000518723 Q6ZVQ6 151 aa5.54□□□□□ -1.52
TRAPPC9-204ENST00000518723 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
TRAPPC9-204ENST00000518723 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
TRAPPC9-204ENST00000518723 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
TRAPPC9-204ENST00000518723 FXYD2P54710 66 aa5.51□□□□□ -1.53
TRAPPC9-204ENST00000518723 COX6CP09669 75 aa5.5□□□□□ -1.53
TRAPPC9-204ENST00000518723 SMIM6P0DI80 62 aa5.5□□□□□ -1.53
TRAPPC9-204ENST00000518723 PSMB2P49721 201 aa5.5□□□□□ -1.53
TRAPPC9-204ENST00000518723 C9JAW5 83 aa5.49□□□□□ -1.53
TRAPPC9-204ENST00000518723 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
TRAPPC9-204ENST00000518723 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
TRAPPC9-204ENST00000518723 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
TRAPPC9-204ENST00000518723 SPATA45Q537H7 98 aa5.46□□□□□ -1.54
TRAPPC9-204ENST00000518723 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
TRAPPC9-204ENST00000518723 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
TRAPPC9-204ENST00000518723 PAM16Q9Y3D7 125 aa5.46□□□□□ -1.54
TRAPPC9-204ENST00000518723 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
TRAPPC9-204ENST00000518723 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
TRAPPC9-204ENST00000518723 A0A1B0GW54 56 aa5.45□□□□□ -1.54
TRAPPC9-204ENST00000518723 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
TRAPPC9-204ENST00000518723 K7ERJ3 54 aa5.43□□□□□ -1.54
TRAPPC9-204ENST00000518723 SPRR2EP22531 72 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 SPRR2BP35325 72 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 SPRR2AP35326 72 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
TRAPPC9-204ENST00000518723 hDV103S1A0JD37 113 aa5.4□□□□□ -1.54
TRAPPC9-204ENST00000518723 NDUFS5O43920 106 aa5.4□□□□□ -1.54
TRAPPC9-204ENST00000518723 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
TRAPPC9-204ENST00000518723 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
TRAPPC9-204ENST00000518723 PCP4L1A6NKN8 68 aa5.39□□□□□ -1.55
TRAPPC9-204ENST00000518723 BAALC-AS2P0C853 105 aa5.39□□□□□ -1.55
TRAPPC9-204ENST00000518723 Q5W150 140 aa5.39□□□□□ -1.55
TRAPPC9-204ENST00000518723 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
TRAPPC9-204ENST00000518723 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
TRAPPC9-204ENST00000518723 HSD52Q0P140 79 aa5.38□□□□□ -1.55
TRAPPC9-204ENST00000518723 KLKP1Q107X0 134 aa5.38□□□□□ -1.55
TRAPPC9-204ENST00000518723 IMUPQ9GZP8 106 aa5.38□□□□□ -1.55
TRAPPC9-204ENST00000518723 JMJD7-PLA2G4BH0Y9G9 81 aa5.36□□□□□ -1.55
TRAPPC9-204ENST00000518723 S4R3F8 94 aa5.36□□□□□ -1.55
TRAPPC9-204ENST00000518723 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
TRAPPC9-204ENST00000518723 PDE6GP18545 87 aa5.35□□□□□ -1.55
TRAPPC9-204ENST00000518723 NREPQ16612 68 aa5.35□□□□□ -1.55
TRAPPC9-204ENST00000518723 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
TRAPPC9-204ENST00000518723 K7EQZ3 153 aa5.33□□□□□ -1.56
TRAPPC9-204ENST00000518723 LCA10Q71F78 164 aa5.32□□□□□ -1.56
TRAPPC9-204ENST00000518723 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
TRAPPC9-204ENST00000518723 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
TRAPPC9-204ENST00000518723 TSTD3H0UI37 97 aa5.29□□□□□ -1.56
TRAPPC9-204ENST00000518723 C14orf132Q9NPU4 83 aa5.28□□□□□ -1.56
TRAPPC9-204ENST00000518723 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
TRAPPC9-204ENST00000518723 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
TRAPPC9-204ENST00000518723 H3BS24 57 aa5.26□□□□□ -1.57
TRAPPC9-204ENST00000518723 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
TRAPPC9-204ENST00000518723 HCG22E2RYF7 251 aa5.25□□□□□ -1.57
TRAPPC9-204ENST00000518723 ATXN8Q156A1 80 aa5.25□□□□□ -1.57
TRAPPC9-204ENST00000518723 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
TRAPPC9-204ENST00000518723 SPRR2DP22532 72 aa5.24□□□□□ -1.57
TRAPPC9-204ENST00000518723 CXCL6P80162 114 aa5.24□□□□□ -1.57
TRAPPC9-204ENST00000518723 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
TRAPPC9-204ENST00000518723 CASC2Q6XLA1 102 aa5.23□□□□□ -1.57
TRAPPC9-204ENST00000518723 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms