RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CCL19Q99731 98 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 MED12Q93074 2177 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 ARHGAP32A7KAX9 2087 aa1.48□□□□□ -2.17
VPS13B-207ENST00000518569 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
VPS13B-207ENST00000518569 SPINK13Q1W4C9 94 aa1.48□□□□□ -2.17
VPS13B-207ENST00000518569 TRRAPQ9Y4A5 3859 aa1.48□□□□□ -2.17
VPS13B-207ENST00000518569 FREM1Q5H8C1 2179 aa1.48□□□□□ -2.17
VPS13B-207ENST00000518569 COX7BP24311 80 aa1.47□□□□□ -2.17
VPS13B-207ENST00000518569 SNRPGP62308 76 aaKnown RBP1.46□□□□□ -2.18
VPS13B-207ENST00000518569 HAMPP81172 84 aa1.46□□□□□ -2.18
VPS13B-207ENST00000518569 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
VPS13B-207ENST00000518569 KMT2CQ8NEZ4 4911 aaKnown RBP1.45□□□□□ -2.18
VPS13B-207ENST00000518569 TENM2Q9NT68 2774 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 SPTY2D1-AS1A0A0U1RR47 76 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 H0YGX0 51 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 M0R1W7 72 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 ARL14EPLP0DKL9 152 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 LINC00575Q6W349 94 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 Q6ZRX8 168 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 CADP27708 2225 aa1.45□□□□□ -2.18
VPS13B-207ENST00000518569 ROS1P08922 2347 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 ARFGEF3Q5TH69 2177 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 ALPK2Q86TB3 2170 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
VPS13B-207ENST00000518569 LINC01546A6NGU7 62 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 I3L3M4 83 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 KCNQ1DNQ9H478 68 aa1.44□□□□□ -2.18
VPS13B-207ENST00000518569 RYR3Q15413 4870 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 IGIPA6NJ69 53 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 LY6G6CO95867 125 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 FXYD6P3P58550 94 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 SSBP3-AS1Q7Z2R9 100 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
VPS13B-207ENST00000518569 A0A096LNT2 108 aa1.42□□□□□ -2.18
VPS13B-207ENST00000518569 LINC00959A0A1B0GUT2 108 aa1.42□□□□□ -2.18
VPS13B-207ENST00000518569 CPSF4LA6NMK7 179 aaKnown RBP1.42□□□□□ -2.18
VPS13B-207ENST00000518569 UNQ6190/PRO20217Q6UXQ8 127 aa1.42□□□□□ -2.18
VPS13B-207ENST00000518569 Q6ZRN7 208 aaPredicted RBP1.42□□□□□ -2.18
VPS13B-207ENST00000518569 WNK2Q9Y3S1 2297 aa1.42□□□□□ -2.18
VPS13B-207ENST00000518569 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
VPS13B-207ENST00000518569 DEFB131BA0A096LNP1 70 aa1.41□□□□□ -2.18
VPS13B-207ENST00000518569 GVQW2A0A096LPI5 108 aaPredicted RBP1.41□□□□□ -2.18
VPS13B-207ENST00000518569 CSMD3Q7Z407 3707 aa1.4□□□□□ -2.18
VPS13B-207ENST00000518569 STATHP02808 62 aa1.4□□□□□ -2.19
VPS13B-207ENST00000518569 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
VPS13B-207ENST00000518569 UBE2DNLQ8IWF7 75 aa1.4□□□□□ -2.19
VPS13B-207ENST00000518569 TMEM167BQ9NRX6 74 aa1.4□□□□□ -2.19
VPS13B-207ENST00000518569 TIMM8BQ9Y5J9 83 aaPredicted RBP1.4□□□□□ -2.19
VPS13B-207ENST00000518569 LYSTQ99698 3801 aa1.4□□□□□ -2.19
VPS13B-207ENST00000518569 STAB2Q8WWQ8 2551 aa1.4□□□□□ -2.19
VPS13B-207ENST00000518569 G3V318 75 aa1.39□□□□□ -2.19
VPS13B-207ENST00000518569 TFF3Q07654 80 aa1.39□□□□□ -2.19
VPS13B-207ENST00000518569 USMG5Q96IX5 58 aa1.39□□□□□ -2.19
VPS13B-207ENST00000518569 RYR1P21817 5038 aa1.39□□□□□ -2.19
VPS13B-207ENST00000518569 PLCE1Q9P212 2302 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 BIRC6Q9NR09 4857 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 SPINK4O60575 86 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 NDUFA3O95167 84 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 DEFB110Q30KQ9 67 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 CRIPTQ9P021 101 aa1.38□□□□□ -2.19
VPS13B-207ENST00000518569 EPPK1P58107 5090 aaKnown RBP1.38□□□□□ -2.19
VPS13B-207ENST00000518569 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
VPS13B-207ENST00000518569 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
VPS13B-207ENST00000518569 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
VPS13B-207ENST00000518569 HYDINQ4G0P3 5121 aa1.37□□□□□ -2.19
VPS13B-207ENST00000518569 COX6B2Q6YFQ2 88 aa1.36□□□□□ -2.19
VPS13B-207ENST00000518569 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
VPS13B-207ENST00000518569 HECTD4Q9Y4D8 3996 aa1.36□□□□□ -2.19
VPS13B-207ENST00000518569 PCLOQ9Y6V0 5065 aa1.35□□□□□ -2.19
VPS13B-207ENST00000518569 CCL22O00626 93 aa1.35□□□□□ -2.19
VPS13B-207ENST00000518569 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
VPS13B-207ENST00000518569 PIGYQ3MUY2 71 aa1.35□□□□□ -2.19
VPS13B-207ENST00000518569 DEFB106AQ8N104 65 aa1.35□□□□□ -2.19
VPS13B-207ENST00000518569 PCOTHQ58A44 107 aa1.34□□□□□ -2.19
VPS13B-207ENST00000518569 FRAS1Q86XX4 4008 aa1.33□□□□□ -2.2
VPS13B-207ENST00000518569 LINC00158P58513 81 aa1.33□□□□□ -2.2
VPS13B-207ENST00000518569 Q8IZM0 81 aa1.33□□□□□ -2.2
VPS13B-207ENST00000518569 SMIM2Q9BVW6 85 aa1.33□□□□□ -2.2
VPS13B-207ENST00000518569 DEFB108AA8MXU0 73 aa1.32□□□□□ -2.2
VPS13B-207ENST00000518569 K7EQZ3 153 aa1.32□□□□□ -2.2
VPS13B-207ENST00000518569 COX14Q96I36 57 aa1.32□□□□□ -2.2
VPS13B-207ENST00000518569 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
VPS13B-207ENST00000518569 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
VPS13B-207ENST00000518569 CDKN2A-AS1Q9UH64 79 aa1.31□□□□□ -2.2
VPS13B-207ENST00000518569 RYR2Q92736 4967 aa1.31□□□□□ -2.2
VPS13B-207ENST00000518569 UBR4Q5T4S7 5183 aa1.31□□□□□ -2.2
VPS13B-207ENST00000518569 DNAH3Q8TD57 4116 aa1.3□□□□□ -2.2
VPS13B-207ENST00000518569 LYNX1G3V0Z9 82 aa1.3□□□□□ -2.2
VPS13B-207ENST00000518569 CRIP1P50238 77 aa1.3□□□□□ -2.2
VPS13B-207ENST00000518569 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
VPS13B-207ENST00000518569 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
VPS13B-207ENST00000518569 CNFNQ9BYD5 112 aa1.3□□□□□ -2.2
VPS13B-207ENST00000518569 HERC2O95714 4834 aa1.29□□□□□ -2.2
VPS13B-207ENST00000518569 DNAH1Q9P2D7 4330 aa1.29□□□□□ -2.2
VPS13B-207ENST00000518569 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
VPS13B-207ENST00000518569 NDUFA1O15239 70 aa1.29□□□□□ -2.2
VPS13B-207ENST00000518569 MINOS1Q5TGZ0 78 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms