RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 J3KT08 172 aa10.12□□□□□ -0.79
TFF3-204ENST00000518498 SEC61BP60468 96 aaKnown RBP10.12□□□□□ -0.79
TFF3-204ENST00000518498 LINC00472Q9H8W2 130 aa10.11□□□□□ -0.79
TFF3-204ENST00000518498 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
TFF3-204ENST00000518498 KRTAP4-1Q9BYQ7 146 aa10.09□□□□□ -0.79
TFF3-204ENST00000518498 Q96NJ1 140 aa10.08□□□□□ -0.8
TFF3-204ENST00000518498 BPY2O14599 106 aa10.07□□□□□ -0.8
TFF3-204ENST00000518498 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
TFF3-204ENST00000518498 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
TFF3-204ENST00000518498 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
TFF3-204ENST00000518498 ATP5EP2Q5VTU8 51 aa10.05□□□□□ -0.8
TFF3-204ENST00000518498 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
TFF3-204ENST00000518498 CXCL6P80162 114 aa10.02□□□□□ -0.81
TFF3-204ENST00000518498 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
TFF3-204ENST00000518498 NDUFB1O75438 58 aa10.01□□□□□ -0.81
TFF3-204ENST00000518498 A8MWP4 228 aa9.99□□□□□ -0.81
TFF3-204ENST00000518498 XP32Q5T750 250 aa9.97□□□□□ -0.81
TFF3-204ENST00000518498 DSCR10P59022 87 aa9.96□□□□□ -0.82
TFF3-204ENST00000518498 CRCT1Q9UGL9 99 aa9.95□□□□□ -0.82
TFF3-204ENST00000518498 A0A1B0GVX0 72 aa9.94□□□□□ -0.82
TFF3-204ENST00000518498 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
TFF3-204ENST00000518498 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
TFF3-204ENST00000518498 FSIP2Q5CZC0 6907 aa9.92□□□□□ -0.82
TFF3-204ENST00000518498 C8orf87E5RJ46 101 aa9.91□□□□□ -0.82
TFF3-204ENST00000518498 K7EQZ3 153 aa9.9□□□□□ -0.82
TFF3-204ENST00000518498 LCE2CQ5TA81 110 aa9.9□□□□□ -0.82
TFF3-204ENST00000518498 IGHV6-1A0A0B4J1U7 121 aa9.89□□□□□ -0.83
TFF3-204ENST00000518498 LINC00313P59037 77 aa9.87□□□□□ -0.83
TFF3-204ENST00000518498 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
TFF3-204ENST00000518498 Q8N9L7 120 aa9.85□□□□□ -0.83
TFF3-204ENST00000518498 IMUPQ9GZP8 106 aa9.85□□□□□ -0.83
TFF3-204ENST00000518498 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
TFF3-204ENST00000518498 MT-ATP8P03928 68 aa9.82□□□□□ -0.84
TFF3-204ENST00000518498 KRTAP19-2Q3LHN2 52 aa9.81□□□□□ -0.84
TFF3-204ENST00000518498 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
TFF3-204ENST00000518498 MT1HP80294 61 aa9.8□□□□□ -0.84
TFF3-204ENST00000518498 MMP24-AS1A0A0U1RRL7 71 aa9.79□□□□□ -0.84
TFF3-204ENST00000518498 HCG22E2RYF7 251 aa9.79□□□□□ -0.84
TFF3-204ENST00000518498 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
TFF3-204ENST00000518498 hDV103S1A0JD37 113 aa9.77□□□□□ -0.85
TFF3-204ENST00000518498 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
TFF3-204ENST00000518498 NOTCH2NLQ7Z3S9 236 aa9.76□□□□□ -0.85
TFF3-204ENST00000518498 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
TFF3-204ENST00000518498 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
TFF3-204ENST00000518498 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
TFF3-204ENST00000518498 A0A087WVE0 104 aa9.72□□□□□ -0.85
TFF3-204ENST00000518498 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
TFF3-204ENST00000518498 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
TFF3-204ENST00000518498 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
TFF3-204ENST00000518498 Q8N9P0 234 aaPredicted RBP9.67□□□□□ -0.86
TFF3-204ENST00000518498 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
TFF3-204ENST00000518498 Q75L30 129 aa9.66□□□□□ -0.86
TFF3-204ENST00000518498 A8MUU9 505 aa9.65□□□□□ -0.86
TFF3-204ENST00000518498 M0R2T5 61 aa9.64□□□□□ -0.87
TFF3-204ENST00000518498 NDUFS5O43920 106 aa9.63□□□□□ -0.87
TFF3-204ENST00000518498 SCGB1A1P11684 91 aa9.61□□□□□ -0.87
TFF3-204ENST00000518498 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
TFF3-204ENST00000518498 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
TFF3-204ENST00000518498 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
TFF3-204ENST00000518498 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
TFF3-204ENST00000518498 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
TFF3-204ENST00000518498 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
TFF3-204ENST00000518498 SMIM20Q8N5G0 67 aa9.55□□□□□ -0.88
TFF3-204ENST00000518498 ATOX1O00244 68 aa9.54□□□□□ -0.88
TFF3-204ENST00000518498 UQCRQO14949 82 aa9.52□□□□□ -0.89
TFF3-204ENST00000518498 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.89
TFF3-204ENST00000518498 OCR1Q9BZK8 76 aa9.49□□□□□ -0.89
TFF3-204ENST00000518498 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
TFF3-204ENST00000518498 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
TFF3-204ENST00000518498 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
TFF3-204ENST00000518498 Q5W150 140 aa9.41□□□□□ -0.9
TFF3-204ENST00000518498 MP68P56378 58 aa9.4□□□□□ -0.9
TFF3-204ENST00000518498 FLGP20930 4061 aaPredicted RBP9.38□□□□□ -0.91
TFF3-204ENST00000518498 H0Y9P7 68 aa9.38□□□□□ -0.91
TFF3-204ENST00000518498 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
TFF3-204ENST00000518498 H3BPC8 53 aa9.36□□□□□ -0.91
TFF3-204ENST00000518498 LOC101927531A0A1B0GV80 90 aa9.33□□□□□ -0.92
TFF3-204ENST00000518498 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
TFF3-204ENST00000518498 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
TFF3-204ENST00000518498 IGKV2-30P06310 120 aa9.3□□□□□ -0.92
TFF3-204ENST00000518498 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
TFF3-204ENST00000518498 SPINK7P58062 85 aa9.29□□□□□ -0.92
TFF3-204ENST00000518498 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
TFF3-204ENST00000518498 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
TFF3-204ENST00000518498 COX7CP15954 63 aa9.28□□□□□ -0.92
TFF3-204ENST00000518498 KRTAP9-7A8MTY7 169 aa9.27□□□□□ -0.93
TFF3-204ENST00000518498 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
TFF3-204ENST00000518498 KRTAP9-8Q9BYQ0 159 aa9.23□□□□□ -0.93
TFF3-204ENST00000518498 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
TFF3-204ENST00000518498 C20orf197Q8N268 126 aa9.2□□□□□ -0.94
TFF3-204ENST00000518498 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
TFF3-204ENST00000518498 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
TFF3-204ENST00000518498 HRES1P13985 223 aa9.13□□□□□ -0.95
TFF3-204ENST00000518498 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
TFF3-204ENST00000518498 NDUFC1O43677 76 aa9.09□□□□□ -0.95
TFF3-204ENST00000518498 MPLKIPQ8TAP9 179 aa9.07□□□□□ -0.96
TFF3-204ENST00000518498 USH2AO75445 5202 aa9.07□□□□□ -0.96
TFF3-204ENST00000518498 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
TFF3-204ENST00000518498 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
TFF3-204ENST00000518498 MT2AP02795 61 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms