RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 Q6JHZ5 121 aa3.97□□□□□ -1.77
CPS1-210ENST00000518043 CCKP06307 115 aa3.96□□□□□ -1.78
CPS1-210ENST00000518043 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
CPS1-210ENST00000518043 Q6Q795 121 aa3.96□□□□□ -1.78
CPS1-210ENST00000518043 SSBP3-AS1Q7Z2R9 100 aa3.95□□□□□ -1.78
CPS1-210ENST00000518043 DSCR8Q96T75 97 aa3.95□□□□□ -1.78
CPS1-210ENST00000518043 FAM240AA0A1B0GVK7 77 aa3.94□□□□□ -1.78
CPS1-210ENST00000518043 PDE6GP18545 87 aa3.94□□□□□ -1.78
CPS1-210ENST00000518043 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
CPS1-210ENST00000518043 TRBV7-7A0A0K0K1E9 115 aa3.93□□□□□ -1.78
CPS1-210ENST00000518043 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
CPS1-210ENST00000518043 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
CPS1-210ENST00000518043 CD164Q04900 197 aa3.92□□□□□ -1.78
CPS1-210ENST00000518043 HRCT1Q6UXD1 115 aa3.92□□□□□ -1.78
CPS1-210ENST00000518043 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
CPS1-210ENST00000518043 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
CPS1-210ENST00000518043 A0A087WSZ3 146 aa3.91□□□□□ -1.78
CPS1-210ENST00000518043 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
CPS1-210ENST00000518043 Q96NJ1 140 aa3.91□□□□□ -1.78
CPS1-210ENST00000518043 K7ERU9 68 aa3.9□□□□□ -1.79
CPS1-210ENST00000518043 Q5XG85 94 aa3.9□□□□□ -1.79
CPS1-210ENST00000518043 Q6ZVQ6 151 aa3.9□□□□□ -1.79
CPS1-210ENST00000518043 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
CPS1-210ENST00000518043 A0A1B0GW54 56 aa3.89□□□□□ -1.79
CPS1-210ENST00000518043 OXTP01178 125 aa3.89□□□□□ -1.79
CPS1-210ENST00000518043 ACYP1P07311 99 aa3.89□□□□□ -1.79
CPS1-210ENST00000518043 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
CPS1-210ENST00000518043 J3QR89 54 aa3.88□□□□□ -1.79
CPS1-210ENST00000518043 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
CPS1-210ENST00000518043 RPS29P62273 56 aaKnown RBP3.88□□□□□ -1.79
CPS1-210ENST00000518043 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
CPS1-210ENST00000518043 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
CPS1-210ENST00000518043 SPINK1P00995 79 aa3.86□□□□□ -1.79
CPS1-210ENST00000518043 C1orf195Q5TG92 126 aa3.86□□□□□ -1.79
CPS1-210ENST00000518043 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
CPS1-210ENST00000518043 DSCR10P59022 87 aa3.85□□□□□ -1.79
CPS1-210ENST00000518043 HMCN2Q8NDA2 5059 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 DEFB116Q30KQ4 102 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 LINC00643Q86TS7 51 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 HERC1Q15751 4861 aa3.84□□□□□ -1.79
CPS1-210ENST00000518043 IGKV3D-7A0A0C4DH55 119 aa3.83□□□□□ -1.8
CPS1-210ENST00000518043 NREPQ16612 68 aa3.83□□□□□ -1.8
CPS1-210ENST00000518043 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
CPS1-210ENST00000518043 IGKV4-1P06312 121 aa3.82□□□□□ -1.8
CPS1-210ENST00000518043 Q8N9L7 120 aa3.82□□□□□ -1.8
CPS1-210ENST00000518043 RETNLBQ9BQ08 111 aa3.82□□□□□ -1.8
CPS1-210ENST00000518043 K7EQZ3 153 aa3.81□□□□□ -1.8
CPS1-210ENST00000518043 BPY2O14599 106 aa3.81□□□□□ -1.8
CPS1-210ENST00000518043 CXCL6P80162 114 aa3.81□□□□□ -1.8
CPS1-210ENST00000518043 ATP5EP2Q5VTU8 51 aa3.81□□□□□ -1.8
CPS1-210ENST00000518043 A8MWP4 228 aa3.8□□□□□ -1.8
CPS1-210ENST00000518043 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
CPS1-210ENST00000518043 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
CPS1-210ENST00000518043 J3KT08 172 aa3.79□□□□□ -1.8
CPS1-210ENST00000518043 A0A087WVE0 104 aa3.78□□□□□ -1.8
CPS1-210ENST00000518043 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.8
CPS1-210ENST00000518043 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
CPS1-210ENST00000518043 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
CPS1-210ENST00000518043 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
CPS1-210ENST00000518043 FP248Q71RG6 208 aaPredicted RBP3.76□□□□□ -1.81
CPS1-210ENST00000518043 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
CPS1-210ENST00000518043 HIST1H4AP62805 103 aaKnown RBP3.75□□□□□ -1.81
CPS1-210ENST00000518043 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
CPS1-210ENST00000518043 C8orf17Q9NRJ1 99 aa3.75□□□□□ -1.81
CPS1-210ENST00000518043 LRP2P98164 4655 aa3.74□□□□□ -1.81
CPS1-210ENST00000518043 IMUPQ9GZP8 106 aa3.74□□□□□ -1.81
CPS1-210ENST00000518043 LPAP08519 4548 aa3.73□□□□□ -1.81
CPS1-210ENST00000518043 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
CPS1-210ENST00000518043 C8orf87E5RJ46 101 aa3.72□□□□□ -1.81
CPS1-210ENST00000518043 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
CPS1-210ENST00000518043 C9orf92A6NGG3 77 aa3.71□□□□□ -1.82
CPS1-210ENST00000518043 NDUFB1O75438 58 aa3.71□□□□□ -1.82
CPS1-210ENST00000518043 FAM236AA0A1B0GUQ0 79 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 FAM236BA0A1B0GV22 79 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 hDV103S1A0JD37 113 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 LINC00313P59037 77 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 PRR4Q16378 134 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
CPS1-210ENST00000518043 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
CPS1-210ENST00000518043 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
CPS1-210ENST00000518043 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
CPS1-210ENST00000518043 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
CPS1-210ENST00000518043 A8MUU9 505 aa3.68□□□□□ -1.82
CPS1-210ENST00000518043 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CPS1-210ENST00000518043 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
CPS1-210ENST00000518043 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
CPS1-210ENST00000518043 SCGB1A1P11684 91 aa3.65□□□□□ -1.83
CPS1-210ENST00000518043 Q5W150 140 aa3.65□□□□□ -1.83
CPS1-210ENST00000518043 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
CPS1-210ENST00000518043 RPL37P61927 97 aaKnown RBP3.64□□□□□ -1.83
CPS1-210ENST00000518043 ATOX1O00244 68 aa3.62□□□□□ -1.83
CPS1-210ENST00000518043 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
CPS1-210ENST00000518043 ZCCHC13Q8WW36 166 aaKnown RBP3.61□□□□□ -1.83
CPS1-210ENST00000518043 UQCRQO14949 82 aa3.6□□□□□ -1.83
CPS1-210ENST00000518043 NDUFS5O43920 106 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms