RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 NBASA2RRP1 2371 aa0.43□□□□□ -2.34
FAM49B-204ENST00000517801 PRRC2CQ9Y520 2896 aaKnown RBP0.43□□□□□ -2.34
FAM49B-204ENST00000517801 WFDC10BQ8IUB3 73 aa0.43□□□□□ -2.34
FAM49B-204ENST00000517801 SMIM2Q9BVW6 85 aa0.43□□□□□ -2.34
FAM49B-204ENST00000517801 LPAP08519 4548 aa0.43□□□□□ -2.34
FAM49B-204ENST00000517801 CEP290O15078 2479 aa0.43□□□□□ -2.34
FAM49B-204ENST00000517801 IGLV5-48A0A075B6I7 105 aa0.42□□□□□ -2.34
FAM49B-204ENST00000517801 H3BNG1 76 aa0.42□□□□□ -2.34
FAM49B-204ENST00000517801 SPRR2BP35325 72 aa0.42□□□□□ -2.34
FAM49B-204ENST00000517801 TFF3Q07654 80 aa0.42□□□□□ -2.34
FAM49B-204ENST00000517801 LMO7Q8WWI1 1683 aa0.41□□□□□ -2.34
FAM49B-204ENST00000517801 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
FAM49B-204ENST00000517801 MAST4O15021 2626 aa0.41□□□□□ -2.34
FAM49B-204ENST00000517801 FLNBO75369 2602 aaKnown RBP0.4□□□□□ -2.34
FAM49B-204ENST00000517801 TNRC18O15417 2968 aaPredicted RBP0.4□□□□□ -2.34
FAM49B-204ENST00000517801 NSD1Q96L73 2696 aaPredicted RBP0.39□□□□□ -2.35
FAM49B-204ENST00000517801 KMT2CQ8NEZ4 4911 aaKnown RBP0.37□□□□□ -2.35
FAM49B-204ENST00000517801 KIF21BO75037 1637 aa0.37□□□□□ -2.35
FAM49B-204ENST00000517801 ANKHD1Q8IWZ3 2542 aaKnown RBP0.37□□□□□ -2.35
FAM49B-204ENST00000517801 A0A1B0GUL6 1792 aa0.37□□□□□ -2.35
FAM49B-204ENST00000517801 DCHS2Q6V1P9 2916 aa0.37□□□□□ -2.35
FAM49B-204ENST00000517801 FLNCQ14315 2725 aa0.36□□□□□ -2.35
FAM49B-204ENST00000517801 FLNAP21333 2647 aaKnown RBP0.35□□□□□ -2.35
FAM49B-204ENST00000517801 IQGAP2Q13576 1575 aa0.35□□□□□ -2.35
FAM49B-204ENST00000517801 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
FAM49B-204ENST00000517801 DEFB131AP59861 70 aa0.34□□□□□ -2.36
FAM49B-204ENST00000517801 NF1P21359 2839 aa0.33□□□□□ -2.36
FAM49B-204ENST00000517801 DDX60Q8IY21 1712 aaKnown RBP0.33□□□□□ -2.36
FAM49B-204ENST00000517801 M0QY20 66 aa0.33□□□□□ -2.36
FAM49B-204ENST00000517801 SPTBN4Q9H254 2564 aa0.33□□□□□ -2.36
FAM49B-204ENST00000517801 HSPG2P98160 4391 aa0.32□□□□□ -2.36
FAM49B-204ENST00000517801 LYSTQ99698 3801 aa0.32□□□□□ -2.36
FAM49B-204ENST00000517801 IQGAP1P46940 1657 aa0.32□□□□□ -2.36
FAM49B-204ENST00000517801 HMCN2Q8NDA2 5059 aa0.31□□□□□ -2.36
FAM49B-204ENST00000517801 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
FAM49B-204ENST00000517801 MTORP42345 2549 aa0.3□□□□□ -2.36
FAM49B-204ENST00000517801 A8MTW9 85 aa0.3□□□□□ -2.36
FAM49B-204ENST00000517801 KIAA1109Q2LD37 5005 aa0.3□□□□□ -2.36
FAM49B-204ENST00000517801 HECTD4Q9Y4D8 3996 aa0.29□□□□□ -2.36
FAM49B-204ENST00000517801 NDUFA1O15239 70 aa0.29□□□□□ -2.36
FAM49B-204ENST00000517801 SPRR2AP35326 72 aa0.29□□□□□ -2.36
FAM49B-204ENST00000517801 RYR2Q92736 4967 aa0.29□□□□□ -2.36
FAM49B-204ENST00000517801 TRPM2O94759 1503 aa0.28□□□□□ -2.37
FAM49B-204ENST00000517801 RYR1P21817 5038 aa0.27□□□□□ -2.37
FAM49B-204ENST00000517801 FAM208AQ9UK61 1670 aaKnown RBP0.27□□□□□ -2.37
FAM49B-204ENST00000517801 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
FAM49B-204ENST00000517801 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
FAM49B-204ENST00000517801 STAB1Q9NY15 2570 aa0.27□□□□□ -2.37
FAM49B-204ENST00000517801 DEFB110Q30KQ9 67 aa0.27□□□□□ -2.37
FAM49B-204ENST00000517801 NFAT5O94916 1531 aa0.27□□□□□ -2.37
FAM49B-204ENST00000517801 GCN1Q92616 2671 aaKnown RBP0.27□□□□□ -2.37
FAM49B-204ENST00000517801 SRRM2Q9UQ35 2752 aaKnown RBP0.27□□□□□ -2.37
FAM49B-204ENST00000517801 M0QZ58 72 aa0.26□□□□□ -2.37
FAM49B-204ENST00000517801 TNP1P09430 55 aa0.26□□□□□ -2.37
FAM49B-204ENST00000517801 KRTAP6-2Q3LI66 62 aa0.25□□□□□ -2.37
FAM49B-204ENST00000517801 TENM2Q9NT68 2774 aa0.24□□□□□ -2.37
FAM49B-204ENST00000517801 SETD2Q9BYW2 2564 aaPredicted RBP0.24□□□□□ -2.37
FAM49B-204ENST00000517801 LRP1BQ9NZR2 4599 aa0.24□□□□□ -2.37
FAM49B-204ENST00000517801 LRRK2Q5S007 2527 aa0.24□□□□□ -2.37
FAM49B-204ENST00000517801 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
FAM49B-204ENST00000517801 PKD1P98161 4303 aa0.23□□□□□ -2.37
FAM49B-204ENST00000517801 ANKRD11Q6UB99 2663 aaPredicted RBP0.23□□□□□ -2.37
FAM49B-204ENST00000517801 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
FAM49B-204ENST00000517801 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
FAM49B-204ENST00000517801 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
FAM49B-204ENST00000517801 ACACAQ13085 2346 aa0.22□□□□□ -2.37
FAM49B-204ENST00000517801 DMXL1Q9Y485 3027 aa0.22□□□□□ -2.37
FAM49B-204ENST00000517801 LRP2P98164 4655 aa0.21□□□□□ -2.38
FAM49B-204ENST00000517801 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
FAM49B-204ENST00000517801 FASNP49327 2511 aaKnown RBP0.2□□□□□ -2.38
FAM49B-204ENST00000517801 MT1AP04731 61 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 DNAH9Q9NYC9 4486 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 PDZD2O15018 2839 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 MUC12Q9UKN1 5478 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 CUBNO60494 3623 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 CLTCL1P53675 1640 aa0.2□□□□□ -2.38
FAM49B-204ENST00000517801 PKHD1P08F94 4074 aa0.19□□□□□ -2.38
FAM49B-204ENST00000517801 SPRR2EP22531 72 aa0.19□□□□□ -2.38
FAM49B-204ENST00000517801 RNF213Q63HN8 5207 aa0.19□□□□□ -2.38
FAM49B-204ENST00000517801 RIF1Q5UIP0 2472 aaKnown RBP0.19□□□□□ -2.38
FAM49B-204ENST00000517801 ATP7AQ04656 1500 aa0.18□□□□□ -2.38
FAM49B-204ENST00000517801 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
FAM49B-204ENST00000517801 STAB2Q8WWQ8 2551 aa0.18□□□□□ -2.38
FAM49B-204ENST00000517801 FLGP20930 4061 aaPredicted RBP0.18□□□□□ -2.38
FAM49B-204ENST00000517801 NBEAL1Q6ZS30 2694 aa0.18□□□□□ -2.38
FAM49B-204ENST00000517801 FAM186AA6NE01 2351 aa0.18□□□□□ -2.38
FAM49B-204ENST00000517801 MAP1AP78559 2803 aaPredicted RBP0.18□□□□□ -2.38
FAM49B-204ENST00000517801 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
FAM49B-204ENST00000517801 SAMD9LQ8IVG5 1584 aa0.15□□□□□ -2.38
FAM49B-204ENST00000517801 TACC2O95359 2948 aa0.15□□□□□ -2.39
FAM49B-204ENST00000517801 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
FAM49B-204ENST00000517801 NBEAQ8NFP9 2946 aa0.14□□□□□ -2.39
FAM49B-204ENST00000517801 POLR2KP53803 58 aaKnown RBP0.14□□□□□ -2.39
FAM49B-204ENST00000517801 TGP01266 2768 aa0.14□□□□□ -2.39
FAM49B-204ENST00000517801 ANK3Q12955 4377 aaKnown RBP0.14□□□□□ -2.39
FAM49B-204ENST00000517801 DNAH3Q8TD57 4116 aa0.13□□□□□ -2.39
FAM49B-204ENST00000517801 CLPSL2Q6UWE3 100 aa0.13□□□□□ -2.39
FAM49B-204ENST00000517801 A0A0C4DFX4 3053 aa0.12□□□□□ -2.39
FAM49B-204ENST00000517801 NBEAL2Q6ZNJ1 2754 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms