RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 FCER1GP30273 86 aa-0.28□□□□□ -2.45
SCARNA15.2-201ENST00000516409 NCBP2-AS2Q69YL0 99 aa-0.28□□□□□ -2.45
SCARNA15.2-201ENST00000516409 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
SCARNA15.2-201ENST00000516409 C3P01024 1663 aa-0.28□□□□□ -2.45
SCARNA15.2-201ENST00000516409 PKD1L2Q7Z442 2459 aa-0.28□□□□□ -2.45
SCARNA15.2-201ENST00000516409 MACF1Q9UPN3 7388 aaKnown RBP-0.29□□□□□ -2.46
SCARNA15.2-201ENST00000516409 SFTA3P0C7M3 94 aa-0.29□□□□□ -2.46
SCARNA15.2-201ENST00000516409 DNAH11Q96DT5 4516 aa-0.29□□□□□ -2.46
SCARNA15.2-201ENST00000516409 ANKRD36CQ5JPF3 1778 aa-0.29□□□□□ -2.46
SCARNA15.2-201ENST00000516409 HTTP42858 3142 aa-0.3□□□□□ -2.46
SCARNA15.2-201ENST00000516409 CEP290O15078 2479 aa-0.3□□□□□ -2.46
SCARNA15.2-201ENST00000516409 M0R1W7 72 aa-0.31□□□□□ -2.46
SCARNA15.2-201ENST00000516409 MT1AP04731 61 aa-0.31□□□□□ -2.46
SCARNA15.2-201ENST00000516409 KIF1AQ12756 1690 aa-0.31□□□□□ -2.46
SCARNA15.2-201ENST00000516409 STARD9Q9P2P6 4700 aa-0.31□□□□□ -2.46
SCARNA15.2-201ENST00000516409 GCN1Q92616 2671 aaKnown RBP-0.31□□□□□ -2.46
SCARNA15.2-201ENST00000516409 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
SCARNA15.2-201ENST00000516409 K7EMI3 77 aa-0.32□□□□□ -2.46
SCARNA15.2-201ENST00000516409 EPG5Q9HCE0 2579 aa-0.33□□□□□ -2.46
SCARNA15.2-201ENST00000516409 DNAH2Q9P225 4427 aa-0.33□□□□□ -2.46
SCARNA15.2-201ENST00000516409 MXRA5Q9NR99 2828 aa-0.33□□□□□ -2.46
SCARNA15.2-201ENST00000516409 S100ZQ8WXG8 99 aa-0.33□□□□□ -2.46
SCARNA15.2-201ENST00000516409 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA15.2-201ENST00000516409 HIVEP1P15822 2718 aa-0.34□□□□□ -2.46
SCARNA15.2-201ENST00000516409 ABCA6Q8N139 1617 aa-0.34□□□□□ -2.46
SCARNA15.2-201ENST00000516409 SMIM31A0A1B0GVY4 71 aa-0.34□□□□□ -2.46
SCARNA15.2-201ENST00000516409 SPRR2FQ96RM1 72 aa-0.34□□□□□ -2.46
SCARNA15.2-201ENST00000516409 MTORP42345 2549 aa-0.34□□□□□ -2.46
SCARNA15.2-201ENST00000516409 HERC1Q15751 4861 aa-0.35□□□□□ -2.46
SCARNA15.2-201ENST00000516409 ANKRD11Q6UB99 2663 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 TACC2O95359 2948 aa-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 KALRNO60229 2985 aa-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 DSTQ03001 7570 aaKnown RBP-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 CCDC180Q9P1Z9 1646 aa-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 TOGARAM1Q9Y4F4 1720 aa-0.35□□□□□ -2.47
SCARNA15.2-201ENST00000516409 H3BUA1 57 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 DEFB110Q30KQ9 67 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 NMES1Q9C002 83 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 GLI2P10070 1586 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.37□□□□□ -2.47
SCARNA15.2-201ENST00000516409 CLASP1Q7Z460 1538 aa-0.38□□□□□ -2.47
SCARNA15.2-201ENST00000516409 IGLV5-48A0A075B6I7 105 aa-0.38□□□□□ -2.47
SCARNA15.2-201ENST00000516409 LRRK2Q5S007 2527 aa-0.39□□□□□ -2.47
SCARNA15.2-201ENST00000516409 SERF2P84101 59 aa-0.39□□□□□ -2.47
SCARNA15.2-201ENST00000516409 MUC17Q685J3 4493 aa-0.39□□□□□ -2.47
SCARNA15.2-201ENST00000516409 UTP20O75691 2785 aaKnown RBP-0.39□□□□□ -2.47
SCARNA15.2-201ENST00000516409 DNAH1Q9P2D7 4330 aa-0.4□□□□□ -2.47
SCARNA15.2-201ENST00000516409 TEP1Q99973 2627 aaKnown RBP-0.4□□□□□ -2.47
SCARNA15.2-201ENST00000516409 IGIPA6NJ69 53 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 SMIM5Q71RC9 77 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 CROCC2H7BZ55 1655 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 UBR4Q5T4S7 5183 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 EEA1Q15075 1411 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 TIAM1Q13009 1591 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 DNAH8Q96JB1 4490 aa-0.41□□□□□ -2.48
SCARNA15.2-201ENST00000516409 NBEAQ8NFP9 2946 aa-0.42□□□□□ -2.48
SCARNA15.2-201ENST00000516409 LINC00308Q8TCZ7 52 aa-0.43□□□□□ -2.48
SCARNA15.2-201ENST00000516409 MYO18BQ8IUG5 2567 aa-0.43□□□□□ -2.48
SCARNA15.2-201ENST00000516409 CPS1P31327 1500 aa-0.43□□□□□ -2.48
SCARNA15.2-201ENST00000516409 LY75O60449 1722 aa-0.44□□□□□ -2.48
SCARNA15.2-201ENST00000516409 CDC42BPAQ5VT25 1732 aa-0.44□□□□□ -2.48
SCARNA15.2-201ENST00000516409 NOP10Q9NPE3 64 aaKnown RBP-0.44□□□□□ -2.48
SCARNA15.2-201ENST00000516409 UGGT1Q9NYU2 1555 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 ACACAQ13085 2346 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 MMP24-AS1A0A0U1RRL7 71 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 TMEM167BQ9NRX6 74 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 RANBP2P49792 3224 aaKnown RBP-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 FAM186AA6NE01 2351 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 TRIOO75962 3097 aa-0.45□□□□□ -2.48
SCARNA15.2-201ENST00000516409 LAMA1P25391 3075 aa-0.46□□□□□ -2.48
SCARNA15.2-201ENST00000516409 ABCA10Q8WWZ4 1543 aa-0.46□□□□□ -2.48
SCARNA15.2-201ENST00000516409 NBEAL2Q6ZNJ1 2754 aa-0.46□□□□□ -2.48
SCARNA15.2-201ENST00000516409 SPENQ96T58 3664 aaKnown RBP-0.46□□□□□ -2.48
SCARNA15.2-201ENST00000516409 ALS2Q96Q42 1657 aa-0.47□□□□□ -2.48
SCARNA15.2-201ENST00000516409 ACACBO00763 2458 aa-0.47□□□□□ -2.49
SCARNA15.2-201ENST00000516409 CCDC168Q8NDH2 2452 aa-0.47□□□□□ -2.49
SCARNA15.2-201ENST00000516409 WDR87Q6ZQQ6 2873 aa-0.47□□□□□ -2.49
SCARNA15.2-201ENST00000516409 MGAM2Q2M2H8 2515 aa-0.48□□□□□ -2.49
SCARNA15.2-201ENST00000516409 ABRACLQ9P1F3 81 aa-0.48□□□□□ -2.49
SCARNA15.2-201ENST00000516409 KAAG1Q9UBP8 84 aa-0.48□□□□□ -2.49
SCARNA15.2-201ENST00000516409 USH2AO75445 5202 aa-0.48□□□□□ -2.49
SCARNA15.2-201ENST00000516409 PRXQ9BXM0 1461 aa-0.48□□□□□ -2.49
SCARNA15.2-201ENST00000516409 TNP1P09430 55 aa-0.5□□□□□ -2.49
SCARNA15.2-201ENST00000516409 ERICH3Q5RHP9 1530 aa-0.5□□□□□ -2.49
SCARNA15.2-201ENST00000516409 PLECQ15149 4684 aaKnown RBP-0.5□□□□□ -2.49
SCARNA15.2-201ENST00000516409 H0YGX0 51 aa-0.51□□□□□ -2.49
SCARNA15.2-201ENST00000516409 SPTBN5Q9NRC6 3674 aaKnown RBP-0.51□□□□□ -2.49
SCARNA15.2-201ENST00000516409 SMIM27A0A1W2PRY6 76 aa-0.52□□□□□ -2.49
SCARNA15.2-201ENST00000516409 RIF1Q5UIP0 2472 aaKnown RBP-0.53□□□□□ -2.49
SCARNA15.2-201ENST00000516409 EFCAB6Q5THR3 1501 aa-0.53□□□□□ -2.49
SCARNA15.2-201ENST00000516409 KRTAP20-2Q3LI61 65 aa-0.53□□□□□ -2.49
SCARNA15.2-201ENST00000516409 ITPR3Q14573 2671 aa-0.54□□□□□ -2.5
SCARNA15.2-201ENST00000516409 M0QY20 66 aa-0.55□□□□□ -2.5
SCARNA15.2-201ENST00000516409 KRTAP19-5Q3LI72 72 aa-0.55□□□□□ -2.5
SCARNA15.2-201ENST00000516409 WFDC10BQ8IUB3 73 aa-0.55□□□□□ -2.5
SCARNA15.2-201ENST00000516409 HERC2O95714 4834 aa-0.55□□□□□ -2.5
SCARNA15.2-201ENST00000516409 A0A0C4DFX4 3053 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms