RNA–Protein interactions for RNA: ENST00000515062.5

SEC31A-240, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-240ENST00000515062 GOLGA4Q13439 2230 aaKnown RBP1.75□□□□□ -2.13
SEC31A-240ENST00000515062 LRBAP50851 2863 aa1.75□□□□□ -2.13
SEC31A-240ENST00000515062 SPINK13Q1W4C9 94 aa1.75□□□□□ -2.13
SEC31A-240ENST00000515062 SMIM2Q9BVW6 85 aa1.75□□□□□ -2.13
SEC31A-240ENST00000515062 CDKN2A-AS1Q9UH64 79 aa1.75□□□□□ -2.13
SEC31A-240ENST00000515062 Q8IZM0 81 aa1.74□□□□□ -2.13
SEC31A-240ENST00000515062 LINC00308Q8TCZ7 52 aa1.74□□□□□ -2.13
SEC31A-240ENST00000515062 DMXL2Q8TDJ6 3036 aa1.74□□□□□ -2.13
SEC31A-240ENST00000515062 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
SEC31A-240ENST00000515062 CHD7Q9P2D1 2997 aa1.74□□□□□ -2.13
SEC31A-240ENST00000515062 HERC1Q15751 4861 aa1.73□□□□□ -2.13
SEC31A-240ENST00000515062 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
SEC31A-240ENST00000515062 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
SEC31A-240ENST00000515062 PRRC2CQ9Y520 2896 aaKnown RBP1.73□□□□□ -2.13
SEC31A-240ENST00000515062 URB1O60287 2271 aaKnown RBP1.73□□□□□ -2.13
SEC31A-240ENST00000515062 KNTC1P50748 2209 aa1.72□□□□□ -2.13
SEC31A-240ENST00000515062 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
SEC31A-240ENST00000515062 F8P00451 2351 aa1.72□□□□□ -2.13
SEC31A-240ENST00000515062 TFF3Q07654 80 aa1.72□□□□□ -2.13
SEC31A-240ENST00000515062 TNRC6CQ9HCJ0 1690 aaKnown RBP1.71□□□□□ -2.14
SEC31A-240ENST00000515062 PTPRQQ9UMZ3 2332 aa1.71□□□□□ -2.14
SEC31A-240ENST00000515062 AKAP13Q12802 2813 aa1.71□□□□□ -2.14
SEC31A-240ENST00000515062 NDUFA1O15239 70 aa1.71□□□□□ -2.14
SEC31A-240ENST00000515062 UBE2DNLQ8IWF7 75 aa1.71□□□□□ -2.14
SEC31A-240ENST00000515062 OTOGQ6ZRI0 2925 aa1.7□□□□□ -2.14
SEC31A-240ENST00000515062 LOC730098B7Z3J9 87 aa1.7□□□□□ -2.14
SEC31A-240ENST00000515062 ROS1P08922 2347 aa1.7□□□□□ -2.14
SEC31A-240ENST00000515062 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
SEC31A-240ENST00000515062 DOPEY2Q9Y3R5 2298 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 TENM2Q9NT68 2774 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 LYNX1G3V0Z9 82 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 IAPPP10997 89 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 HIVEP1P15822 2718 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 CNTRLQ7Z7A1 2325 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 MEGF8Q7Z7M0 2845 aa1.69□□□□□ -2.14
SEC31A-240ENST00000515062 K7EQZ3 153 aa1.68□□□□□ -2.14
SEC31A-240ENST00000515062 COX6B2Q6YFQ2 88 aa1.68□□□□□ -2.14
SEC31A-240ENST00000515062 ATMQ13315 3056 aa1.68□□□□□ -2.14
SEC31A-240ENST00000515062 ADGRG4Q8IZF6 3080 aa1.68□□□□□ -2.14
SEC31A-240ENST00000515062 MXRA5Q9NR99 2828 aa1.68□□□□□ -2.14
SEC31A-240ENST00000515062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.68□□□□□ -2.148e-7■■■■□ 25.7
SEC31A-240ENST00000515062 NSD1Q96L73 2696 aaPredicted RBP1.68□□□□□ -2.14
SEC31A-240ENST00000515062 MGAM2Q2M2H8 2515 aa1.67□□□□□ -2.14
SEC31A-240ENST00000515062 TENM3Q9P273 2699 aa1.66□□□□□ -2.14
SEC31A-240ENST00000515062 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
SEC31A-240ENST00000515062 PRB3Q04118 309 aaPredicted RBP1.66□□□□□ -2.14
SEC31A-240ENST00000515062 ARHGAP5-AS1Q96IT6 56 aa1.66□□□□□ -2.14
SEC31A-240ENST00000515062 MRPL34Q9BQ48 92 aaKnown RBP1.66□□□□□ -2.14
SEC31A-240ENST00000515062 AHCTF1Q8WYP5 2266 aa1.66□□□□□ -2.14
SEC31A-240ENST00000515062 CUBNO60494 3623 aa1.66□□□□□ -2.14
SEC31A-240ENST00000515062 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.14
SEC31A-240ENST00000515062 DCHS2Q6V1P9 2916 aa1.65□□□□□ -2.14
SEC31A-240ENST00000515062 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
SEC31A-240ENST00000515062 CACNA1EQ15878 2313 aa1.65□□□□□ -2.15
SEC31A-240ENST00000515062 I3L2K1 104 aa1.65□□□□□ -2.15
SEC31A-240ENST00000515062 USMG5Q96IX5 58 aa1.65□□□□□ -2.15
SEC31A-240ENST00000515062 VPS13CQ709C8 3753 aa1.64□□□□□ -2.15
SEC31A-240ENST00000515062 TP53AIP1Q9HCN2 124 aa1.64□□□□□ -2.15
SEC31A-240ENST00000515062 MGAQ8IWI9 3026 aa1.64□□□□□ -2.15
SEC31A-240ENST00000515062 WNK1Q9H4A3 2382 aa1.63□□□□□ -2.15
SEC31A-240ENST00000515062 H0YAA0 97 aa1.63□□□□□ -2.15
SEC31A-240ENST00000515062 MINOS1Q5TGZ0 78 aa1.63□□□□□ -2.15
SEC31A-240ENST00000515062 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 CENPEQ02224 2701 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 CHD9Q3L8U1 2897 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 CCL22O00626 93 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 PIGYQ3MUY2 71 aa1.62□□□□□ -2.15
SEC31A-240ENST00000515062 CSPG4Q6UVK1 2322 aa1.61□□□□□ -2.15
SEC31A-240ENST00000515062 NBASA2RRP1 2371 aa1.61□□□□□ -2.15
SEC31A-240ENST00000515062 RPS27LQ71UM5 84 aaKnown RBP1.61□□□□□ -2.15
SEC31A-240ENST00000515062 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
SEC31A-240ENST00000515062 AKAP9Q99996 3911 aa1.61□□□□□ -2.15
SEC31A-240ENST00000515062 APCP25054 2843 aa1.6□□□□□ -2.15
SEC31A-240ENST00000515062 LAMA1P25391 3075 aa1.59□□□□□ -2.15
SEC31A-240ENST00000515062 K7EIL1 84 aa1.59□□□□□ -2.15
SEC31A-240ENST00000515062 POLR2KP53803 58 aaKnown RBP1.59□□□□□ -2.15
SEC31A-240ENST00000515062 COX6A2Q02221 97 aa1.59□□□□□ -2.15
SEC31A-240ENST00000515062 LINC01590Q5TEZ4 76 aa1.59□□□□□ -2.15
SEC31A-240ENST00000515062 TTTY10Q9BZA0 68 aa1.59□□□□□ -2.15
SEC31A-240ENST00000515062 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
SEC31A-240ENST00000515062 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
SEC31A-240ENST00000515062 FSIP2Q5CZC0 6907 aa1.56□□□□□ -2.16
SEC31A-240ENST00000515062 IGLV5-48A0A075B6I7 105 aa1.56□□□□□ -2.16
SEC31A-240ENST00000515062 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
SEC31A-240ENST00000515062 MAP1AP78559 2803 aaPredicted RBP1.56□□□□□ -2.16
SEC31A-240ENST00000515062 SVEP1Q4LDE5 3571 aa1.55□□□□□ -2.16
SEC31A-240ENST00000515062 RPS27P42677 84 aaKnown RBP1.55□□□□□ -2.16
SEC31A-240ENST00000515062 LELP1Q5T871 98 aa1.55□□□□□ -2.16
SEC31A-240ENST00000515062 ACANP16112 2415 aa1.55□□□□□ -2.16
SEC31A-240ENST00000515062 RPL39P62891 51 aaKnown RBP1.54□□□□□ -2.16
SEC31A-240ENST00000515062 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
SEC31A-240ENST00000515062 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
SEC31A-240ENST00000515062 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
SEC31A-240ENST00000515062 WFDC10BQ8IUB3 73 aa1.53□□□□□ -2.16
SEC31A-240ENST00000515062 DEFB130BP0DP73 79 aa1.52□□□□□ -2.17
SEC31A-240ENST00000515062 DEFB130AP0DP74 79 aa1.52□□□□□ -2.17
SEC31A-240ENST00000515062 RPL39LQ96EH5 51 aaKnown RBP1.52□□□□□ -2.17
SEC31A-240ENST00000515062 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
SEC31A-240ENST00000515062 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms