RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 ACACBO00763 2458 aa0.67□□□□□ -2.3
LDHBP3-201ENST00000514909 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
LDHBP3-201ENST00000514909 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 UGGT1Q9NYU2 1555 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 ITPR1Q14643 2758 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 H0YGG7 62 aa0.65□□□□□ -2.31
LDHBP3-201ENST00000514909 BIRC6Q9NR09 4857 aa0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 MAP1BP46821 2468 aaKnown RBP0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 SPG11Q96JI7 2443 aa0.63□□□□□ -2.31
LDHBP3-201ENST00000514909 CROCC2H7BZ55 1655 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 CLASP1Q7Z460 1538 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 FLNCQ14315 2725 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 IGIPA6NJ69 53 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 SYCP2Q9BX26 1530 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 HMCN2Q8NDA2 5059 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 UTP20O75691 2785 aaKnown RBP0.59□□□□□ -2.31
LDHBP3-201ENST00000514909 MXRA5Q9NR99 2828 aa0.59□□□□□ -2.31
LDHBP3-201ENST00000514909 ACANP16112 2415 aa0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 ZFHX4Q86UP3 3567 aa0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 LAMA2P24043 3122 aaKnown RBP0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 DSPP15924 2871 aaKnown RBP0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 DNHD1Q96M86 4753 aa0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 RPS27P42677 84 aaKnown RBP0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 RPS27LQ71UM5 84 aaKnown RBP0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 VCANP13611 3396 aa0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 DMBT1Q9UGM3 2413 aaPredicted RBP0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 NBEAL1Q6ZS30 2694 aa0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 CEP295Q9C0D2 2601 aa0.56□□□□□ -2.32
LDHBP3-201ENST00000514909 CFAP46Q8IYW2 2715 aa0.56□□□□□ -2.32
LDHBP3-201ENST00000514909 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 SPRR2BP35325 72 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 PRLHP81277 87 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 MKI67P46013 3256 aaKnown RBP0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 TGP01266 2768 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 MROH2AA6NES4 1674 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 WNK1Q9H4A3 2382 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 SZT2Q5T011 3432 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 CDC42BPAQ5VT25 1732 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 COL7A1Q02388 2944 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 SPEGQ15772 3267 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 UNC80Q8N2C7 3258 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 S4R3F8 94 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 EP400Q96L91 3159 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 HSPG2P98160 4391 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 CFAP47Q6ZTR5 3102 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 USH2AO75445 5202 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 DCHS1Q96JQ0 3298 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 HERC2O95714 4834 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 APC2O95996 2303 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 LYSTQ99698 3801 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 ADCY10Q96PN6 1610 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 TLN1Q9Y490 2541 aaKnown RBP0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 LAMA3Q16787 3333 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 EYSQ5T1H1 3165 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 ANKRD36CQ5JPF3 1778 aa0.49□□□□□ -2.33
LDHBP3-201ENST00000514909 NBEAQ8NFP9 2946 aa0.49□□□□□ -2.33
LDHBP3-201ENST00000514909 DEFB106AQ8N104 65 aa0.48□□□□□ -2.33
LDHBP3-201ENST00000514909 TMEM167BQ9NRX6 74 aa0.48□□□□□ -2.33
LDHBP3-201ENST00000514909 PCNX1Q96RV3 2341 aa0.47□□□□□ -2.33
LDHBP3-201ENST00000514909 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
LDHBP3-201ENST00000514909 DNAH12Q6ZR08 3092 aa0.46□□□□□ -2.34
LDHBP3-201ENST00000514909 RELNP78509 3460 aa0.45□□□□□ -2.34
LDHBP3-201ENST00000514909 RANBP2P49792 3224 aaKnown RBP0.45□□□□□ -2.34
LDHBP3-201ENST00000514909 MUC12Q9UKN1 5478 aa0.44□□□□□ -2.34
LDHBP3-201ENST00000514909 ITPR2Q14571 2701 aa0.44□□□□□ -2.34
LDHBP3-201ENST00000514909 AGLP35573 1532 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 FANCD2Q9BXW9 1451 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 H0YGX0 51 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 NIPBLQ6KC79 2804 aaeCLIP0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 SPTAN1Q13813 2472 aaKnown RBP0.42□□□□□ -2.34
LDHBP3-201ENST00000514909 C5orf42Q9H799 3197 aa0.42□□□□□ -2.34
LDHBP3-201ENST00000514909 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 H3BUA1 57 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 MTORP42345 2549 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 CENPFP49454 3210 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 CEP250Q9BV73 2442 aa0.4□□□□□ -2.34
LDHBP3-201ENST00000514909 WDR87Q6ZQQ6 2873 aa0.4□□□□□ -2.34
LDHBP3-201ENST00000514909 FAM186AA6NE01 2351 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 LINC00308Q8TCZ7 52 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 MUC3AQ02505 3323 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 LRBAP50851 2863 aa0.38□□□□□ -2.35
LDHBP3-201ENST00000514909 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 CRYBG3Q68DQ2 2970 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 CEP290O15078 2479 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 PLNP26678 52 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 NBASA2RRP1 2371 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
LDHBP3-201ENST00000514909 TIMM8BQ9Y5J9 83 aaPredicted RBP0.36□□□□□ -2.35
LDHBP3-201ENST00000514909 PKD1P98161 4303 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms