RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
SMAD1-212ENST00000514168 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
SMAD1-212ENST00000514168 IGKV4-1P06312 121 aa6.6□□□□□ -1.35
SMAD1-212ENST00000514168 J3KT08 172 aa6.59□□□□□ -1.35
SMAD1-212ENST00000514168 DEFB116Q30KQ4 102 aa6.59□□□□□ -1.35
SMAD1-212ENST00000514168 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
SMAD1-212ENST00000514168 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
SMAD1-212ENST00000514168 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
SMAD1-212ENST00000514168 Q6ZVQ6 151 aa6.57□□□□□ -1.36
SMAD1-212ENST00000514168 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
SMAD1-212ENST00000514168 IMUPQ9GZP8 106 aa6.55□□□□□ -1.36
SMAD1-212ENST00000514168 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
SMAD1-212ENST00000514168 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
SMAD1-212ENST00000514168 BPY2O14599 106 aa6.53□□□□□ -1.36
SMAD1-212ENST00000514168 NDUFB1O75438 58 aa6.53□□□□□ -1.36
SMAD1-212ENST00000514168 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
SMAD1-212ENST00000514168 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
SMAD1-212ENST00000514168 A8MWP4 228 aa6.51□□□□□ -1.37
SMAD1-212ENST00000514168 DSCR10P59022 87 aa6.5□□□□□ -1.37
SMAD1-212ENST00000514168 IGHV6-1A0A0B4J1U7 121 aa6.49□□□□□ -1.37
SMAD1-212ENST00000514168 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
SMAD1-212ENST00000514168 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
SMAD1-212ENST00000514168 LINC00313P59037 77 aa6.48□□□□□ -1.37
SMAD1-212ENST00000514168 XP32Q5T750 250 aa6.47□□□□□ -1.37
SMAD1-212ENST00000514168 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
SMAD1-212ENST00000514168 K7EQZ3 153 aa6.46□□□□□ -1.38
SMAD1-212ENST00000514168 CXCL6P80162 114 aa6.45□□□□□ -1.38
SMAD1-212ENST00000514168 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
SMAD1-212ENST00000514168 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
SMAD1-212ENST00000514168 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
SMAD1-212ENST00000514168 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
SMAD1-212ENST00000514168 Q8N9L7 120 aa6.43□□□□□ -1.38
SMAD1-212ENST00000514168 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
SMAD1-212ENST00000514168 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
SMAD1-212ENST00000514168 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
SMAD1-212ENST00000514168 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
SMAD1-212ENST00000514168 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
SMAD1-212ENST00000514168 Q75L30 129 aa6.39□□□□□ -1.39
SMAD1-212ENST00000514168 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
SMAD1-212ENST00000514168 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
SMAD1-212ENST00000514168 A8MUU9 505 aa6.38□□□□□ -1.39
SMAD1-212ENST00000514168 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
SMAD1-212ENST00000514168 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
SMAD1-212ENST00000514168 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
SMAD1-212ENST00000514168 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
SMAD1-212ENST00000514168 CASC2Q6XLA1 102 aa6.36□□□□□ -1.39
SMAD1-212ENST00000514168 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
SMAD1-212ENST00000514168 HCG22E2RYF7 251 aa6.35□□□□□ -1.39
SMAD1-212ENST00000514168 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
SMAD1-212ENST00000514168 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
SMAD1-212ENST00000514168 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
SMAD1-212ENST00000514168 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
SMAD1-212ENST00000514168 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
SMAD1-212ENST00000514168 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
SMAD1-212ENST00000514168 ATOX1O00244 68 aa6.32□□□□□ -1.4
SMAD1-212ENST00000514168 PCOTHQ58A44 107 aa6.32□□□□□ -1.4
SMAD1-212ENST00000514168 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
SMAD1-212ENST00000514168 NDUFS5O43920 106 aa6.3□□□□□ -1.4
SMAD1-212ENST00000514168 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
SMAD1-212ENST00000514168 A0A087WVE0 104 aa6.27□□□□□ -1.41
SMAD1-212ENST00000514168 UQCRQO14949 82 aa6.27□□□□□ -1.41
SMAD1-212ENST00000514168 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
SMAD1-212ENST00000514168 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
SMAD1-212ENST00000514168 COX7CP15954 63 aa6.24□□□□□ -1.41
SMAD1-212ENST00000514168 SERP2Q8N6R1 65 aa6.23□□□□□ -1.41
SMAD1-212ENST00000514168 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
SMAD1-212ENST00000514168 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
SMAD1-212ENST00000514168 MT1HP80294 61 aa6.2□□□□□ -1.42
SMAD1-212ENST00000514168 Q5W150 140 aa6.18□□□□□ -1.42
SMAD1-212ENST00000514168 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
SMAD1-212ENST00000514168 TRAV7A0A075B6U4 112 aa6.15□□□□□ -1.42
SMAD1-212ENST00000514168 SPINK7P58062 85 aa6.14□□□□□ -1.43
SMAD1-212ENST00000514168 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
SMAD1-212ENST00000514168 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
SMAD1-212ENST00000514168 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-212ENST00000514168 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
SMAD1-212ENST00000514168 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
SMAD1-212ENST00000514168 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
SMAD1-212ENST00000514168 TMEM258P61165 79 aa6.09□□□□□ -1.43
SMAD1-212ENST00000514168 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.44
SMAD1-212ENST00000514168 H0Y9P7 68 aa6.08□□□□□ -1.44
SMAD1-212ENST00000514168 HRES1P13985 223 aa6.07□□□□□ -1.44
SMAD1-212ENST00000514168 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
SMAD1-212ENST00000514168 NDUFC1O43677 76 aa6.06□□□□□ -1.44
SMAD1-212ENST00000514168 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
SMAD1-212ENST00000514168 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
SMAD1-212ENST00000514168 MP68P56378 58 aa6.05□□□□□ -1.44
SMAD1-212ENST00000514168 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
SMAD1-212ENST00000514168 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
SMAD1-212ENST00000514168 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
SMAD1-212ENST00000514168 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
SMAD1-212ENST00000514168 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
SMAD1-212ENST00000514168 LINC00208Q96KT6 92 aa6.02□□□□□ -1.45
SMAD1-212ENST00000514168 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
SMAD1-212ENST00000514168 H3BPC8 53 aa6.01□□□□□ -1.45
SMAD1-212ENST00000514168 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
SMAD1-212ENST00000514168 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
SMAD1-212ENST00000514168 FAM236CP0DP71 79 aa6□□□□□ -1.45
SMAD1-212ENST00000514168 ATP5EP56381 51 aaPredicted RBP5.99□□□□□ -1.45
SMAD1-212ENST00000514168 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms