RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FAT1Q14517 4588 aa8.63□□□□□ -1.03
VCAN-211ENST00000513984 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
VCAN-211ENST00000513984 H7BZZ5 65 aa8.63□□□□□ -1.03
VCAN-211ENST00000513984 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
VCAN-211ENST00000513984 NDUFC1O43677 76 aa8.61□□□□□ -1.03
VCAN-211ENST00000513984 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
VCAN-211ENST00000513984 RYR3Q15413 4870 aa8.59□□□□□ -1.03
VCAN-211ENST00000513984 C1orf195Q5TG92 126 aa8.59□□□□□ -1.03
VCAN-211ENST00000513984 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
VCAN-211ENST00000513984 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
VCAN-211ENST00000513984 SPINK1P00995 79 aa8.57□□□□□ -1.04
VCAN-211ENST00000513984 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
VCAN-211ENST00000513984 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
VCAN-211ENST00000513984 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
VCAN-211ENST00000513984 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
VCAN-211ENST00000513984 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
VCAN-211ENST00000513984 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
VCAN-211ENST00000513984 LINC00304Q8N9R0 145 aa8.54□□□□□ -1.04
VCAN-211ENST00000513984 MP68P56378 58 aa8.53□□□□□ -1.04
VCAN-211ENST00000513984 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
VCAN-211ENST00000513984 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
VCAN-211ENST00000513984 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
VCAN-211ENST00000513984 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
VCAN-211ENST00000513984 H0Y9P7 68 aa8.51□□□□□ -1.05
VCAN-211ENST00000513984 H3BPC8 53 aa8.51□□□□□ -1.05
VCAN-211ENST00000513984 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
VCAN-211ENST00000513984 TRAV22A0A0B4J277 110 aa8.5□□□□□ -1.05
VCAN-211ENST00000513984 HSPG2P98160 4391 aa8.49□□□□□ -1.05
VCAN-211ENST00000513984 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
VCAN-211ENST00000513984 NDUFS5O43920 106 aa8.47□□□□□ -1.05
VCAN-211ENST00000513984 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
VCAN-211ENST00000513984 LINC00313P59037 77 aa8.47□□□□□ -1.05
VCAN-211ENST00000513984 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
VCAN-211ENST00000513984 Q5VSD8 79 aa8.45□□□□□ -1.06
VCAN-211ENST00000513984 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
VCAN-211ENST00000513984 RYR1P21817 5038 aa8.43□□□□□ -1.06
VCAN-211ENST00000513984 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
VCAN-211ENST00000513984 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
VCAN-211ENST00000513984 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
VCAN-211ENST00000513984 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
VCAN-211ENST00000513984 OXTP01178 125 aa8.36□□□□□ -1.07
VCAN-211ENST00000513984 Q5W150 140 aa8.36□□□□□ -1.07
VCAN-211ENST00000513984 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
VCAN-211ENST00000513984 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
VCAN-211ENST00000513984 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
VCAN-211ENST00000513984 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
VCAN-211ENST00000513984 TNXBP22105 4242 aa8.32□□□□□ -1.08
VCAN-211ENST00000513984 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
VCAN-211ENST00000513984 LOC101927531A0A1B0GV80 90 aa8.31□□□□□ -1.08
VCAN-211ENST00000513984 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
VCAN-211ENST00000513984 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
VCAN-211ENST00000513984 Q8N1X5 172 aa8.29□□□□□ -1.08
VCAN-211ENST00000513984 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.08
VCAN-211ENST00000513984 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
VCAN-211ENST00000513984 PCOTHQ58A44 107 aa8.26□□□□□ -1.09
VCAN-211ENST00000513984 PRR4Q16378 134 aa8.25□□□□□ -1.09
VCAN-211ENST00000513984 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
VCAN-211ENST00000513984 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
VCAN-211ENST00000513984 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
VCAN-211ENST00000513984 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
VCAN-211ENST00000513984 SMIM26A0A096LP01 95 aa8.18□□□□□ -1.1
VCAN-211ENST00000513984 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
VCAN-211ENST00000513984 A8MUU9 505 aa8.17□□□□□ -1.1
VCAN-211ENST00000513984 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
VCAN-211ENST00000513984 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.11
VCAN-211ENST00000513984 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
VCAN-211ENST00000513984 J3QL48 77 aa8.12□□□□□ -1.11
VCAN-211ENST00000513984 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
VCAN-211ENST00000513984 HRES1P13985 223 aa8.1□□□□□ -1.11
VCAN-211ENST00000513984 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
VCAN-211ENST00000513984 Q75L30 129 aa8.08□□□□□ -1.12
VCAN-211ENST00000513984 COA5Q86WW8 74 aa8.08□□□□□ -1.12
VCAN-211ENST00000513984 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
VCAN-211ENST00000513984 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
VCAN-211ENST00000513984 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
VCAN-211ENST00000513984 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
VCAN-211ENST00000513984 ACYP2P14621 99 aa8□□□□□ -1.13
VCAN-211ENST00000513984 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
VCAN-211ENST00000513984 Q1T7F1 81 aa7.99□□□□□ -1.13
VCAN-211ENST00000513984 XP32Q5T750 250 aa7.96□□□□□ -1.13
VCAN-211ENST00000513984 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
VCAN-211ENST00000513984 V9GYY9 64 aa7.93□□□□□ -1.14
VCAN-211ENST00000513984 SPINK7P58062 85 aa7.92□□□□□ -1.14
VCAN-211ENST00000513984 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
VCAN-211ENST00000513984 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.14
VCAN-211ENST00000513984 A8MUN3 132 aa7.89□□□□□ -1.15
VCAN-211ENST00000513984 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
VCAN-211ENST00000513984 HERC2O95714 4834 aa7.86□□□□□ -1.15
VCAN-211ENST00000513984 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
VCAN-211ENST00000513984 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
VCAN-211ENST00000513984 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
VCAN-211ENST00000513984 PSPHP1O15172 72 aa7.82□□□□□ -1.16
VCAN-211ENST00000513984 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
VCAN-211ENST00000513984 LCE2BO14633 110 aa7.79□□□□□ -1.16
VCAN-211ENST00000513984 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
VCAN-211ENST00000513984 Q5VV11 94 aa7.77□□□□□ -1.17
VCAN-211ENST00000513984 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
VCAN-211ENST00000513984 LRP2P98164 4655 aa7.73□□□□□ -1.17
VCAN-211ENST00000513984 LPAP08519 4548 aa7.71□□□□□ -1.18
VCAN-211ENST00000513984 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms