RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 C3orf79P0CE67 100 aa4.94□□□□□ -1.62
SFXN1-210ENST00000513725 TEN1Q86WV5 123 aa4.94□□□□□ -1.62
SFXN1-210ENST00000513725 H3BUT2 72 aa4.93□□□□□ -1.62
SFXN1-210ENST00000513725 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
SFXN1-210ENST00000513725 IFI27L1Q96BM0 104 aa4.93□□□□□ -1.62
SFXN1-210ENST00000513725 A0A1B0GX51 115 aa4.92□□□□□ -1.62
SFXN1-210ENST00000513725 HERVK_113P61574 105 aa4.92□□□□□ -1.62
SFXN1-210ENST00000513725 Q6ZQY7 126 aa4.92□□□□□ -1.62
SFXN1-210ENST00000513725 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
SFXN1-210ENST00000513725 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
SFXN1-210ENST00000513725 KLKP1Q107X0 134 aa4.9□□□□□ -1.63
SFXN1-210ENST00000513725 SEC11CQ9BY50 192 aa4.9□□□□□ -1.63
SFXN1-210ENST00000513725 A6NDN8 102 aa4.88□□□□□ -1.63
SFXN1-210ENST00000513725 J3KT08 172 aa4.88□□□□□ -1.63
SFXN1-210ENST00000513725 MT1XP80297 61 aa4.88□□□□□ -1.63
SFXN1-210ENST00000513725 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
SFXN1-210ENST00000513725 SERF1AO75920 110 aa4.87□□□□□ -1.63
SFXN1-210ENST00000513725 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
SFXN1-210ENST00000513725 C18orf32Q8TCD1 76 aa4.87□□□□□ -1.63
SFXN1-210ENST00000513725 LITAFQ99732 161 aa4.87□□□□□ -1.63
SFXN1-210ENST00000513725 hADV29S1A0JD25 119 aa4.85□□□□□ -1.63
SFXN1-210ENST00000513725 HSD52Q0P140 79 aa4.85□□□□□ -1.63
SFXN1-210ENST00000513725 LINC00575Q6W349 94 aa4.85□□□□□ -1.63
SFXN1-210ENST00000513725 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
SFXN1-210ENST00000513725 DSCR8Q96T75 97 aa4.85□□□□□ -1.63
SFXN1-210ENST00000513725 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 TIMM17BO60830 172 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 PLNP26678 52 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 HIST3H2BBQ8N257 126 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
SFXN1-210ENST00000513725 PRR15Q8IV56 129 aa4.83□□□□□ -1.64
SFXN1-210ENST00000513725 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
SFXN1-210ENST00000513725 RBM3P98179 157 aaKnown RBP4.82□□□□□ -1.64
SFXN1-210ENST00000513725 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
SFXN1-210ENST00000513725 SMIM11BQ8TCY0 68 aa4.82□□□□□ -1.64
SFXN1-210ENST00000513725 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
SFXN1-210ENST00000513725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.8□□□□□ -1.64
SFXN1-210ENST00000513725 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
SFXN1-210ENST00000513725 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
SFXN1-210ENST00000513725 UQCR10Q9UDW1 63 aa4.79□□□□□ -1.64
SFXN1-210ENST00000513725 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
SFXN1-210ENST00000513725 DPM2O94777 84 aa4.78□□□□□ -1.64
SFXN1-210ENST00000513725 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
SFXN1-210ENST00000513725 LCA10Q71F78 164 aa4.78□□□□□ -1.64
SFXN1-210ENST00000513725 HIST1H2BLQ99880 126 aa4.78□□□□□ -1.64
SFXN1-210ENST00000513725 C9JAW5 83 aa4.77□□□□□ -1.65
SFXN1-210ENST00000513725 BATFQ16520 125 aa4.77□□□□□ -1.65
SFXN1-210ENST00000513725 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
SFXN1-210ENST00000513725 RAB37Q96AX2 223 aa4.77□□□□□ -1.65
SFXN1-210ENST00000513725 FABP4P15090 132 aa4.76□□□□□ -1.65
SFXN1-210ENST00000513725 VAMP8Q9BV40 100 aa4.76□□□□□ -1.65
SFXN1-210ENST00000513725 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
SFXN1-210ENST00000513725 E9PLD3 99 aa4.75□□□□□ -1.65
SFXN1-210ENST00000513725 IGKCP01834 107 aa4.75□□□□□ -1.65
SFXN1-210ENST00000513725 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
SFXN1-210ENST00000513725 CHCHD1Q96BP2 118 aaKnown RBP4.74□□□□□ -1.65
SFXN1-210ENST00000513725 LINC00472Q9H8W2 130 aa4.73□□□□□ -1.65
SFXN1-210ENST00000513725 HIST1H2BKO60814 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BJP06899 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BOP23527 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BBP33778 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BDP58876 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BCP62807 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST2H2BEQ16778 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BHQ93079 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BNQ99877 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 HIST1H2BMQ99879 126 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 TRAPPC1Q9Y5R8 145 aa4.71□□□□□ -1.66
SFXN1-210ENST00000513725 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
SFXN1-210ENST00000513725 NDUFV3P56181 108 aaKnown RBP4.69□□□□□ -1.66
SFXN1-210ENST00000513725 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
SFXN1-210ENST00000513725 F8W1H4 67 aa4.68□□□□□ -1.66
SFXN1-210ENST00000513725 IFITM1P13164 125 aa4.68□□□□□ -1.66
SFXN1-210ENST00000513725 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
SFXN1-210ENST00000513725 S4R3F8 94 aa4.68□□□□□ -1.66
SFXN1-210ENST00000513725 K7EP34 96 aa4.67□□□□□ -1.66
SFXN1-210ENST00000513725 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
SFXN1-210ENST00000513725 FAM240AA0A1B0GVK7 77 aa4.66□□□□□ -1.66
SFXN1-210ENST00000513725 H3BMG7 143 aa4.66□□□□□ -1.66
SFXN1-210ENST00000513725 TRGC2P03986 189 aa4.66□□□□□ -1.66
SFXN1-210ENST00000513725 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
SFXN1-210ENST00000513725 LEPROTL1O95214 131 aa4.65□□□□□ -1.67
SFXN1-210ENST00000513725 TRBV7-4A0A0J9YYF1 115 aa4.64□□□□□ -1.67
SFXN1-210ENST00000513725 TAX1BP3O14907 124 aa4.64□□□□□ -1.67
SFXN1-210ENST00000513725 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-210ENST00000513725 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
SFXN1-210ENST00000513725 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
SFXN1-210ENST00000513725 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
SFXN1-210ENST00000513725 TMEM258P61165 79 aa4.62□□□□□ -1.67
SFXN1-210ENST00000513725 MUSTN1Q8IVN3 82 aa4.62□□□□□ -1.67
SFXN1-210ENST00000513725 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
SFXN1-210ENST00000513725 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
SFXN1-210ENST00000513725 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
SFXN1-210ENST00000513725 UQCRQO14949 82 aa4.6□□□□□ -1.67
SFXN1-210ENST00000513725 TRIAP1O43715 76 aa4.6□□□□□ -1.67
SFXN1-210ENST00000513725 PAM16Q9Y3D7 125 aa4.6□□□□□ -1.67
SFXN1-210ENST00000513725 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms