RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
DDX41-216ENST00000513562 PSMB2P49721 201 aa5.19□□□□□ -1.58
DDX41-216ENST00000513562 SIGMAR1Q99720 223 aa5.19□□□□□ -1.58
DDX41-216ENST00000513562 COX6CP09669 75 aa5.17□□□□□ -1.58
DDX41-216ENST00000513562 COL5A1-AS1Q5SY13 56 aa5.16□□□□□ -1.58
DDX41-216ENST00000513562 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
DDX41-216ENST00000513562 KMT2DO14686 5537 aa5.15□□□□□ -1.58
DDX41-216ENST00000513562 TRIAP1O43715 76 aa5.15□□□□□ -1.59
DDX41-216ENST00000513562 SNCGO76070 127 aa5.15□□□□□ -1.59
DDX41-216ENST00000513562 H0YGX0 51 aa5.14□□□□□ -1.59
DDX41-216ENST00000513562 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
DDX41-216ENST00000513562 C9orf118A6NHY6 69 aa5.12□□□□□ -1.59
DDX41-216ENST00000513562 IGKV4-1P06312 121 aa5.12□□□□□ -1.59
DDX41-216ENST00000513562 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
DDX41-216ENST00000513562 SPINK7P58062 85 aa5.12□□□□□ -1.59
DDX41-216ENST00000513562 NAA38Q9BRA0 125 aaKnown RBP5.12□□□□□ -1.59
DDX41-216ENST00000513562 A6NN06 94 aa5.11□□□□□ -1.59
DDX41-216ENST00000513562 TAX1BP3O14907 124 aa5.11□□□□□ -1.59
DDX41-216ENST00000513562 DNAL4O96015 105 aa5.11□□□□□ -1.59
DDX41-216ENST00000513562 A0A1B0GX51 115 aa5.1□□□□□ -1.59
DDX41-216ENST00000513562 FABP2P12104 132 aa5.1□□□□□ -1.59
DDX41-216ENST00000513562 NDUFV3P56181 108 aaKnown RBP5.1□□□□□ -1.59
DDX41-216ENST00000513562 A0A1W2PNM2 257 aa5.09□□□□□ -1.59
DDX41-216ENST00000513562 A0A1W2PPM0 123 aa5.09□□□□□ -1.59
DDX41-216ENST00000513562 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
DDX41-216ENST00000513562 ZCCHC13Q8WW36 166 aaKnown RBP5.08□□□□□ -1.6
DDX41-216ENST00000513562 IGHV6-1A0A0B4J1U7 121 aa5.07□□□□□ -1.6
DDX41-216ENST00000513562 H3BMG7 143 aa5.07□□□□□ -1.6
DDX41-216ENST00000513562 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
DDX41-216ENST00000513562 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
DDX41-216ENST00000513562 TRACP01848 142 aa5.06□□□□□ -1.6
DDX41-216ENST00000513562 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
DDX41-216ENST00000513562 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
DDX41-216ENST00000513562 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
DDX41-216ENST00000513562 H3BQ85 93 aa5.05□□□□□ -1.6
DDX41-216ENST00000513562 LINC00472Q9H8W2 130 aa5.05□□□□□ -1.6
DDX41-216ENST00000513562 ORMDL1Q9P0S3 153 aa5.05□□□□□ -1.6
DDX41-216ENST00000513562 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
DDX41-216ENST00000513562 TRBV7-4A0A0J9YYF1 115 aa5.03□□□□□ -1.6
DDX41-216ENST00000513562 C8orf87E5RJ46 101 aa5.03□□□□□ -1.6
DDX41-216ENST00000513562 GTF2H5Q6ZYL4 71 aa5.03□□□□□ -1.6
DDX41-216ENST00000513562 K7EP34 96 aa5.02□□□□□ -1.61
DDX41-216ENST00000513562 MT1BP07438 61 aa5.02□□□□□ -1.61
DDX41-216ENST00000513562 C9JAW5 83 aa5.01□□□□□ -1.61
DDX41-216ENST00000513562 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
DDX41-216ENST00000513562 A0A1B0GVX0 72 aa5□□□□□ -1.61
DDX41-216ENST00000513562 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
DDX41-216ENST00000513562 C21orf62-AS1Q17RA5 79 aa4.99□□□□□ -1.61
DDX41-216ENST00000513562 H3BT86 120 aa4.98□□□□□ -1.61
DDX41-216ENST00000513562 BAALC-AS2P0C853 105 aa4.98□□□□□ -1.61
DDX41-216ENST00000513562 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
DDX41-216ENST00000513562 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
DDX41-216ENST00000513562 UBE2V1Q13404 147 aa4.97□□□□□ -1.61
DDX41-216ENST00000513562 A0A1B0GV72 72 aa4.96□□□□□ -1.62
DDX41-216ENST00000513562 A0A1B0GV90 55 aa4.96□□□□□ -1.62
DDX41-216ENST00000513562 Q5VV11 94 aa4.96□□□□□ -1.62
DDX41-216ENST00000513562 JMJD7-PLA2G4BH0Y9G9 81 aa4.94□□□□□ -1.62
DDX41-216ENST00000513562 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
DDX41-216ENST00000513562 F8W1H4 67 aa4.93□□□□□ -1.62
DDX41-216ENST00000513562 CCKP06307 115 aa4.93□□□□□ -1.62
DDX41-216ENST00000513562 RBM3P98179 157 aaKnown RBP4.93□□□□□ -1.62
DDX41-216ENST00000513562 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
DDX41-216ENST00000513562 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
DDX41-216ENST00000513562 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
DDX41-216ENST00000513562 PDE6GP18545 87 aa4.89□□□□□ -1.63
DDX41-216ENST00000513562 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
DDX41-216ENST00000513562 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
DDX41-216ENST00000513562 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
DDX41-216ENST00000513562 J3KT08 172 aa4.88□□□□□ -1.63
DDX41-216ENST00000513562 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
DDX41-216ENST00000513562 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
DDX41-216ENST00000513562 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
DDX41-216ENST00000513562 SPRR2EP22531 72 aa4.87□□□□□ -1.63
DDX41-216ENST00000513562 SPRR2BP35325 72 aa4.87□□□□□ -1.63
DDX41-216ENST00000513562 SPRR2AP35326 72 aa4.87□□□□□ -1.63
DDX41-216ENST00000513562 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
DDX41-216ENST00000513562 FAM236AA0A1B0GUQ0 79 aa4.86□□□□□ -1.63
DDX41-216ENST00000513562 FAM236BA0A1B0GV22 79 aa4.86□□□□□ -1.63
DDX41-216ENST00000513562 Q6ZQT0 140 aa4.85□□□□□ -1.63
DDX41-216ENST00000513562 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
DDX41-216ENST00000513562 C8orf17Q9NRJ1 99 aa4.85□□□□□ -1.63
DDX41-216ENST00000513562 NDUFB1O75438 58 aa4.84□□□□□ -1.63
DDX41-216ENST00000513562 A0A1B0GW54 56 aa4.82□□□□□ -1.64
DDX41-216ENST00000513562 Q6ZVQ6 151 aa4.81□□□□□ -1.64
DDX41-216ENST00000513562 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
DDX41-216ENST00000513562 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
DDX41-216ENST00000513562 J3QR89 54 aa4.78□□□□□ -1.64
DDX41-216ENST00000513562 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
DDX41-216ENST00000513562 IMUPQ9GZP8 106 aa4.77□□□□□ -1.65
DDX41-216ENST00000513562 ACYP1P07311 99 aa4.76□□□□□ -1.65
DDX41-216ENST00000513562 NREPQ16612 68 aa4.76□□□□□ -1.65
DDX41-216ENST00000513562 UBL5Q9BZL1 73 aa4.76□□□□□ -1.65
DDX41-216ENST00000513562 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
DDX41-216ENST00000513562 FAM240AA0A1B0GVK7 77 aa4.75□□□□□ -1.65
DDX41-216ENST00000513562 H3BS24 57 aa4.75□□□□□ -1.65
DDX41-216ENST00000513562 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
DDX41-216ENST00000513562 C7orf65Q6ZTY9 151 aa4.75□□□□□ -1.65
DDX41-216ENST00000513562 MRPL34Q9BQ48 92 aaKnown RBP4.75□□□□□ -1.65
DDX41-216ENST00000513562 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
DDX41-216ENST00000513562 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms