RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 TRIOO75962 3097 aa2.09□□□□□ -2.08
PDS5A-209ENST00000512643 CFAP47Q6ZTR5 3102 aa2.08□□□□□ -2.08
PDS5A-209ENST00000512643 HIVEP3Q5T1R4 2406 aa2.08□□□□□ -2.08
PDS5A-209ENST00000512643 VWFP04275 2813 aa2.08□□□□□ -2.08
PDS5A-209ENST00000512643 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
PDS5A-209ENST00000512643 CHD9Q3L8U1 2897 aa2.08□□□□□ -2.08
PDS5A-209ENST00000512643 PRRC2CQ9Y520 2896 aaKnown RBP2.08□□□□□ -2.08
PDS5A-209ENST00000512643 SONP18583 2426 aaKnown RBP2.07□□□□□ -2.08
PDS5A-209ENST00000512643 DMBT1Q9UGM3 2413 aaPredicted RBP2.07□□□□□ -2.08
PDS5A-209ENST00000512643 CEP290O15078 2479 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 SZT2Q5T011 3432 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 FRYQ5TBA9 3013 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 NF1P21359 2839 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 NCOR2Q9Y618 2525 aa2.07□□□□□ -2.08
PDS5A-209ENST00000512643 MKI67P46013 3256 aaKnown RBP2.06□□□□□ -2.08
PDS5A-209ENST00000512643 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
PDS5A-209ENST00000512643 LRBAP50851 2863 aa2.06□□□□□ -2.08
PDS5A-209ENST00000512643 BOD1L1Q8NFC6 3051 aa2.06□□□□□ -2.08
PDS5A-209ENST00000512643 COL6A5A8TX70 2615 aa2.04□□□□□ -2.08
PDS5A-209ENST00000512643 SPTBN5Q9NRC6 3674 aaKnown RBP2.04□□□□□ -2.08
PDS5A-209ENST00000512643 SETD2Q9BYW2 2564 aaPredicted RBP2.04□□□□□ -2.08
PDS5A-209ENST00000512643 DEFB4AO15263 64 aa2.03□□□□□ -2.08
PDS5A-209ENST00000512643 COL12A1Q99715 3063 aa2.03□□□□□ -2.08
PDS5A-209ENST00000512643 DNAH11Q96DT5 4516 aa2.02□□□□□ -2.09
PDS5A-209ENST00000512643 ABCA12Q86UK0 2595 aa2.02□□□□□ -2.09
PDS5A-209ENST00000512643 DEFB135Q30KP9 77 aa2.02□□□□□ -2.09
PDS5A-209ENST00000512643 C5orf42Q9H799 3197 aa2.02□□□□□ -2.09
PDS5A-209ENST00000512643 SPTAN1Q13813 2472 aaKnown RBP2.01□□□□□ -2.09
PDS5A-209ENST00000512643 AKAP9Q99996 3911 aa2.01□□□□□ -2.09
PDS5A-209ENST00000512643 XIRP2A4UGR9 3374 aa2.01□□□□□ -2.09
PDS5A-209ENST00000512643 TLN1Q9Y490 2541 aaKnown RBP2.01□□□□□ -2.09
PDS5A-209ENST00000512643 DMDP11532 3685 aa2.01□□□□□ -2.09
PDS5A-209ENST00000512643 TTC28Q96AY4 2481 aa2□□□□□ -2.09
PDS5A-209ENST00000512643 LAMA2P24043 3122 aaKnown RBP2□□□□□ -2.09
PDS5A-209ENST00000512643 CELSR1Q9NYQ6 3014 aa2□□□□□ -2.09
PDS5A-209ENST00000512643 USP34Q70CQ2 3546 aa2□□□□□ -2.09
PDS5A-209ENST00000512643 HECTD1Q9ULT8 2610 aa2□□□□□ -2.09
PDS5A-209ENST00000512643 SPEGQ15772 3267 aa1.99□□□□□ -2.09
PDS5A-209ENST00000512643 NBPF19A0A087WUL8 3843 aa1.99□□□□□ -2.09
PDS5A-209ENST00000512643 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
PDS5A-209ENST00000512643 DMXL1Q9Y485 3027 aa1.99□□□□□ -2.09
PDS5A-209ENST00000512643 PTPN13Q12923 2485 aa1.98□□□□□ -2.09
PDS5A-209ENST00000512643 DNAH12Q6ZR08 3092 aa1.98□□□□□ -2.09
PDS5A-209ENST00000512643 UNC80Q8N2C7 3258 aa1.98□□□□□ -2.09
PDS5A-209ENST00000512643 MEGF8Q7Z7M0 2845 aa1.98□□□□□ -2.09
PDS5A-209ENST00000512643 LRRK2Q5S007 2527 aa1.97□□□□□ -2.09
PDS5A-209ENST00000512643 APCP25054 2843 aa1.97□□□□□ -2.09
PDS5A-209ENST00000512643 EP400Q96L91 3159 aa1.96□□□□□ -2.1
PDS5A-209ENST00000512643 CELSR3Q9NYQ7 3312 aa1.96□□□□□ -2.1
PDS5A-209ENST00000512643 TACC2O95359 2948 aa1.96□□□□□ -2.1
PDS5A-209ENST00000512643 ZFHX4Q86UP3 3567 aa1.95□□□□□ -2.1
PDS5A-209ENST00000512643 RPS29P62273 56 aaKnown RBP1.95□□□□□ -2.1
PDS5A-209ENST00000512643 FREM2Q5SZK8 3169 aa1.95□□□□□ -2.1
PDS5A-209ENST00000512643 USP9XQ93008 2570 aaPredicted RBP1.95□□□□□ -2.1
PDS5A-209ENST00000512643 ACANP16112 2415 aa1.95□□□□□ -2.1
PDS5A-209ENST00000512643 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
PDS5A-209ENST00000512643 NIPBLQ6KC79 2804 aaeCLIP1.94□□□□□ -2.1
PDS5A-209ENST00000512643 ATMQ13315 3056 aa1.94□□□□□ -2.1
PDS5A-209ENST00000512643 TLN2Q9Y4G6 2542 aa1.94□□□□□ -2.1
PDS5A-209ENST00000512643 LAMA1P25391 3075 aa1.94□□□□□ -2.1
PDS5A-209ENST00000512643 TEX15Q9BXT5 2789 aa1.93□□□□□ -2.1
PDS5A-209ENST00000512643 HELZ2Q9BYK8 2649 aaKnown RBP1.93□□□□□ -2.1
PDS5A-209ENST00000512643 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
PDS5A-209ENST00000512643 OBSCNQ5VST9 7968 aa1.92□□□□□ -2.1
PDS5A-209ENST00000512643 MTORP42345 2549 aa1.92□□□□□ -2.1
PDS5A-209ENST00000512643 EPG5Q9HCE0 2579 aa1.92□□□□□ -2.1
PDS5A-209ENST00000512643 BDP1A6H8Y1 2624 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 DCHS2Q6V1P9 2916 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 DMXL2Q8TDJ6 3036 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 TNP1P09430 55 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 CFAP46Q8IYW2 2715 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
PDS5A-209ENST00000512643 DNAH14Q0VDD8 3507 aa1.9□□□□□ -2.1
PDS5A-209ENST00000512643 UTP20O75691 2785 aaKnown RBP1.9□□□□□ -2.1
PDS5A-209ENST00000512643 USP9YO00507 2555 aaPredicted RBP1.9□□□□□ -2.11
PDS5A-209ENST00000512643 CENPEQ02224 2701 aa1.9□□□□□ -2.11
PDS5A-209ENST00000512643 ZFYVE26Q68DK2 2539 aa1.9□□□□□ -2.11
PDS5A-209ENST00000512643 DOPEY1Q5JWR5 2465 aa1.9□□□□□ -2.11
PDS5A-209ENST00000512643 DNAH1Q9P2D7 4330 aa1.89□□□□□ -2.11
PDS5A-209ENST00000512643 CHD8Q9HCK8 2581 aa1.89□□□□□ -2.11
PDS5A-209ENST00000512643 SPENQ96T58 3664 aaKnown RBP1.89□□□□□ -2.11
PDS5A-209ENST00000512643 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
PDS5A-209ENST00000512643 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
PDS5A-209ENST00000512643 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
PDS5A-209ENST00000512643 ITPR3Q14573 2671 aa1.88□□□□□ -2.11
PDS5A-209ENST00000512643 LAMA5O15230 3695 aa1.88□□□□□ -2.11
PDS5A-209ENST00000512643 USP24Q9UPU5 2620 aa1.87□□□□□ -2.11
PDS5A-209ENST00000512643 TGP01266 2768 aa1.87□□□□□ -2.11
PDS5A-209ENST00000512643 FRAS1Q86XX4 4008 aa1.87□□□□□ -2.11
PDS5A-209ENST00000512643 CSMD1Q96PZ7 3565 aa1.87□□□□□ -2.11
PDS5A-209ENST00000512643 LAMA3Q16787 3333 aa1.87□□□□□ -2.11
PDS5A-209ENST00000512643 ZNF292O60281 2723 aa1.86□□□□□ -2.11
PDS5A-209ENST00000512643 POLQO75417 2590 aa1.86□□□□□ -2.11
PDS5A-209ENST00000512643 SETXQ7Z333 2677 aaKnown RBP1.86□□□□□ -2.11
PDS5A-209ENST00000512643 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
PDS5A-209ENST00000512643 BSNQ9UPA5 3926 aa1.85□□□□□ -2.11
PDS5A-209ENST00000512643 COL7A1Q02388 2944 aa1.84□□□□□ -2.11
PDS5A-209ENST00000512643 PIEZO1Q92508 2521 aa1.84□□□□□ -2.11
PDS5A-209ENST00000512643 LOC400499M0QZD8 3231 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms