RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340		H0YGX0	51 aa		4.41	□□□□□ -1.7
NR1I3-231	ENST00000512340	MPLKIP	Q8TAP9	179 aa		4.41	□□□□□ -1.7
NR1I3-231	ENST00000512340	FAT3	Q8TDW7	4589 aa		4.41	□□□□□ -1.7
NR1I3-231	ENST00000512340	RNF213	Q63HN8	5207 aa		4.41	□□□□□ -1.7
NR1I3-231	ENST00000512340	IGLV9-49	A0A0B4J1Y8	123 aa		4.4	□□□□□ -1.71
NR1I3-231	ENST00000512340		H7C2G1	150 aa		4.4	□□□□□ -1.71
NR1I3-231	ENST00000512340	DNAL4	O96015	105 aa		4.4	□□□□□ -1.71
NR1I3-231	ENST00000512340		Q8NBF4	154 aa		4.4	□□□□□ -1.71
NR1I3-231	ENST00000512340	DEFB105A	Q8NG35	78 aa		4.4	□□□□□ -1.71
NR1I3-231	ENST00000512340	PKHD1L1	Q86WI1	4243 aa		4.39	□□□□□ -1.71
NR1I3-231	ENST00000512340	SPINK1	P00995	79 aa		4.39	□□□□□ -1.71
NR1I3-231	ENST00000512340	SPRR1B	P22528	89 aa		4.39	□□□□□ -1.71
NR1I3-231	ENST00000512340	MOBP	Q13875	183 aa		4.39	□□□□□ -1.71
NR1I3-231	ENST00000512340	LRP2	P98164	4655 aa		4.39	□□□□□ -1.71
NR1I3-231	ENST00000512340		A0A0A0MQY5	61 aa		4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340		H3BQ85	93 aa		4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340	MP68	P56378	58 aa		4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340	KRTAP13-2	Q52LG2	175 aa		4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340	LINC00575	Q6W349	94 aa		4.38	□□□□□ -1.71
NR1I3-231	ENST00000512340	IGKV3D-7	A0A0C4DH55	119 aa		4.37	□□□□□ -1.71
NR1I3-231	ENST00000512340		A6NN06	94 aa		4.37	□□□□□ -1.71
NR1I3-231	ENST00000512340	PRR4	Q16378	134 aa		4.37	□□□□□ -1.71
NR1I3-231	ENST00000512340	ST20-AS1	Q8NBB2	130 aa		4.37	□□□□□ -1.71
NR1I3-231	ENST00000512340		A0A087WVE0	104 aa		4.36	□□□□□ -1.71
NR1I3-231	ENST00000512340	RPS29	P62273	56 aa	Known RBP	4.36	□□□□□ -1.71
NR1I3-231	ENST00000512340	LIMD2	Q9BT23	127 aa		4.36	□□□□□ -1.71
NR1I3-231	ENST00000512340	IGLV5-48	A0A075B6I7	105 aa		4.35	□□□□□ -1.71
NR1I3-231	ENST00000512340	BAALC-AS2	P0C853	105 aa		4.35	□□□□□ -1.71
NR1I3-231	ENST00000512340	LINC00313	P59037	77 aa		4.35	□□□□□ -1.71
NR1I3-231	ENST00000512340		Q6ZQY7	126 aa		4.35	□□□□□ -1.71
NR1I3-231	ENST00000512340	OBSCN-AS1	Q96MR7	158 aa		4.35	□□□□□ -1.71
NR1I3-231	ENST00000512340	hDV103S1	A0JD37	113 aa		4.34	□□□□□ -1.71
NR1I3-231	ENST00000512340	ASB16-AS1	Q495Z4	193 aa		4.34	□□□□□ -1.71
NR1I3-231	ENST00000512340	LINC01554	Q52M75	96 aa		4.34	□□□□□ -1.71
NR1I3-231	ENST00000512340	CYP4F30P	Q9H0H9	118 aa		4.34	□□□□□ -1.71
NR1I3-231	ENST00000512340	CLEC2B	Q92478	149 aa		4.33	□□□□□ -1.72
NR1I3-231	ENST00000512340	LINC00846	Q9NV44	126 aa		4.33	□□□□□ -1.72
NR1I3-231	ENST00000512340	TRBV7-4	A0A0J9YYF1	115 aa		4.32	□□□□□ -1.72
NR1I3-231	ENST00000512340	TRAV22	A0A0B4J277	110 aa		4.31	□□□□□ -1.72
NR1I3-231	ENST00000512340	LCE2C	Q5TA81	110 aa		4.31	□□□□□ -1.72
NR1I3-231	ENST00000512340		Q8N377	158 aa		4.31	□□□□□ -1.72
NR1I3-231	ENST00000512340	IGLV7-46	A0A075B6I9	117 aa		4.3	□□□□□ -1.72
NR1I3-231	ENST00000512340	ORMDL1	Q9P0S3	153 aa		4.3	□□□□□ -1.72
NR1I3-231	ENST00000512340	SNURF	Q9Y675	71 aa		4.3	□□□□□ -1.72
NR1I3-231	ENST00000512340	TNXB	P22105	4242 aa		4.3	□□□□□ -1.72
NR1I3-231	ENST00000512340	PSPHP1	O15172	72 aa		4.29	□□□□□ -1.72
NR1I3-231	ENST00000512340	LINC01547	P58512	204 aa	Predicted RBP	4.29	□□□□□ -1.72
NR1I3-231	ENST00000512340	NOTCH2NL	Q7Z3S9	236 aa		4.29	□□□□□ -1.72
NR1I3-231	ENST00000512340	SMIM29	Q86T20	159 aa		4.28	□□□□□ -1.72
NR1I3-231	ENST00000512340	TMEM254	Q8TBM7	123 aa		4.28	□□□□□ -1.72
NR1I3-231	ENST00000512340	UBL5	Q9BZL1	73 aa		4.28	□□□□□ -1.72
NR1I3-231	ENST00000512340	IGLV8-61	A0A075B6I0	122 aa		4.27	□□□□□ -1.73
NR1I3-231	ENST00000512340	HCG22	E2RYF7	251 aa		4.27	□□□□□ -1.73
NR1I3-231	ENST00000512340	RETNLB	Q9BQ08	111 aa		4.27	□□□□□ -1.73
NR1I3-231	ENST00000512340	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.26	□□□□□ -1.73
NR1I3-231	ENST00000512340	TPRXL	Q17RH7	258 aa		4.26	□□□□□ -1.73
NR1I3-231	ENST00000512340		Q5VV11	94 aa		4.26	□□□□□ -1.73
NR1I3-231	ENST00000512340	FAM218A	Q96MZ4	157 aa		4.26	□□□□□ -1.73
NR1I3-231	ENST00000512340	CDC42SE1	Q9NRR8	79 aa		4.26	□□□□□ -1.73
NR1I3-231	ENST00000512340	IGHV6-1	A0A0B4J1U7	121 aa		4.25	□□□□□ -1.73
NR1I3-231	ENST00000512340		Q75L30	129 aa		4.25	□□□□□ -1.73
NR1I3-231	ENST00000512340	LCE2A	Q5TA79	106 aa	Predicted RBP	4.24	□□□□□ -1.73
NR1I3-231	ENST00000512340	SPTSSB	Q8NFR3	76 aa		4.24	□□□□□ -1.73
NR1I3-231	ENST00000512340	NREP	Q16612	68 aa		4.23	□□□□□ -1.73
NR1I3-231	ENST00000512340	IGFL1	Q6UW32	110 aa		4.23	□□□□□ -1.73
NR1I3-231	ENST00000512340	C14orf132	Q9NPU4	83 aa		4.23	□□□□□ -1.73
NR1I3-231	ENST00000512340		A0A1B0GW54	56 aa		4.22	□□□□□ -1.73
NR1I3-231	ENST00000512340	CHKB-CPT1B	H3BT56	60 aa		4.22	□□□□□ -1.73
NR1I3-231	ENST00000512340	C1orf64	Q8NEQ6	169 aa		4.21	□□□□□ -1.74
NR1I3-231	ENST00000512340	KRTAP9-2	Q9BYQ4	174 aa		4.21	□□□□□ -1.74
NR1I3-231	ENST00000512340	LOC101927531	A0A1B0GV80	90 aa		4.2	□□□□□ -1.74
NR1I3-231	ENST00000512340	PDE6G	P18545	87 aa		4.2	□□□□□ -1.74
NR1I3-231	ENST00000512340	LOR	P23490	312 aa	Predicted RBP	4.19	□□□□□ -1.74
NR1I3-231	ENST00000512340	SEC61B	P60468	96 aa	Known RBP	4.19	□□□□□ -1.74
NR1I3-231	ENST00000512340		A0A0G2JQZ4	141 aa		4.18	□□□□□ -1.74
NR1I3-231	ENST00000512340	KRTAP13-3	Q3SY46	172 aa		4.18	□□□□□ -1.74
NR1I3-231	ENST00000512340		A0A087WSZ3	146 aa		4.17	□□□□□ -1.74
NR1I3-231	ENST00000512340	KRTAP9-6	A0A140TA67	174 aa		4.17	□□□□□ -1.74
NR1I3-231	ENST00000512340	CASC2	Q6XLA1	102 aa		4.17	□□□□□ -1.74
NR1I3-231	ENST00000512340		A6NED7	52 aa		4.16	□□□□□ -1.74
NR1I3-231	ENST00000512340	BPY2	O14599	106 aa		4.16	□□□□□ -1.74
NR1I3-231	ENST00000512340	NDUFB1	O75438	58 aa		4.16	□□□□□ -1.74
NR1I3-231	ENST00000512340	MUC2	Q02817	5179 aa		4.15	□□□□□ -1.74
NR1I3-231	ENST00000512340	LOC110117498	A0A087WWA1	95 aa		4.15	□□□□□ -1.75
NR1I3-231	ENST00000512340		Q8N9P0	234 aa	Predicted RBP	4.15	□□□□□ -1.75
NR1I3-231	ENST00000512340	OCR1	Q9BZK8	76 aa		4.15	□□□□□ -1.75
NR1I3-231	ENST00000512340	FAT4	Q6V0I7	4981 aa		4.14	□□□□□ -1.75
NR1I3-231	ENST00000512340		A8MU10	97 aa		4.14	□□□□□ -1.75
NR1I3-231	ENST00000512340		A0A1W2PNM2	257 aa		4.13	□□□□□ -1.75
NR1I3-231	ENST00000512340	C9orf92	A6NGG3	77 aa		4.13	□□□□□ -1.75
NR1I3-231	ENST00000512340	XP32	Q5T750	250 aa		4.13	□□□□□ -1.75
NR1I3-231	ENST00000512340	PRR15L	Q9BU68	103 aa		4.13	□□□□□ -1.75
NR1I3-231	ENST00000512340	ZCCHC13	Q8WW36	166 aa	Known RBP	4.12	□□□□□ -1.75
NR1I3-231	ENST00000512340	IGKV4-1	P06312	121 aa		4.11	□□□□□ -1.75
NR1I3-231	ENST00000512340	LPA	P08519	4548 aa		4.11	□□□□□ -1.75
NR1I3-231	ENST00000512340	SPANXA2-OT1	Q8N9U9	137 aa		4.1	□□□□□ -1.75
NR1I3-231	ENST00000512340		Q6ZQT0	140 aa		4.09	□□□□□ -1.75
NR1I3-231	ENST00000512340		Q96NJ1	140 aa		4.08	□□□□□ -1.76
NR1I3-231	ENST00000512340	RPL37	P61927	97 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms