RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 TEN1Q86WV5 123 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 PPDPFLQ8WWR9 84 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 LINC01600Q96MT4 127 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 C9orf153Q5TBE3 101 aa4.09□□□□□ -1.75
RFC1-213ENST00000512275 C14orf132Q9NPU4 83 aa4.09□□□□□ -1.75
RFC1-213ENST00000512275 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
RFC1-213ENST00000512275 JMJD7-PLA2G4BH0Y9G9 81 aa4.07□□□□□ -1.76
RFC1-213ENST00000512275 RBM3P98179 157 aaKnown RBP4.07□□□□□ -1.76
RFC1-213ENST00000512275 MOBPQ13875 183 aa4.07□□□□□ -1.76
RFC1-213ENST00000512275 OBSCN-AS1Q96MR7 158 aa4.07□□□□□ -1.76
RFC1-213ENST00000512275 VPS25Q9BRG1 176 aa4.06□□□□□ -1.76
RFC1-213ENST00000512275 CRYGAP11844 174 aa4.05□□□□□ -1.76
RFC1-213ENST00000512275 FAM229BQ4G0N7 80 aa4.05□□□□□ -1.76
RFC1-213ENST00000512275 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
RFC1-213ENST00000512275 IGFL1Q6UW32 110 aa4.05□□□□□ -1.76
RFC1-213ENST00000512275 DSCR8Q96T75 97 aa4.05□□□□□ -1.76
RFC1-213ENST00000512275 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
RFC1-213ENST00000512275 TRBV7-4A0A0J9YYF1 115 aa4.04□□□□□ -1.76
RFC1-213ENST00000512275 Q6ZQT0 140 aa4.04□□□□□ -1.76
RFC1-213ENST00000512275 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
RFC1-213ENST00000512275 CCKP06307 115 aa4.03□□□□□ -1.76
RFC1-213ENST00000512275 Q6JHZ5 121 aa4.03□□□□□ -1.76
RFC1-213ENST00000512275 HRCT1Q6UXD1 115 aa4.03□□□□□ -1.76
RFC1-213ENST00000512275 HERC2O95714 4834 aa4.03□□□□□ -1.76
RFC1-213ENST00000512275 FLG2Q5D862 2391 aaPredicted RBP4.03□□□□□ -1.76
RFC1-213ENST00000512275 A0A1B0GVX0 72 aa4.02□□□□□ -1.77
RFC1-213ENST00000512275 PDE6GP18545 87 aa4□□□□□ -1.77
RFC1-213ENST00000512275 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
RFC1-213ENST00000512275 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
RFC1-213ENST00000512275 J3QR89 54 aa3.99□□□□□ -1.77
RFC1-213ENST00000512275 K7ERU9 68 aa3.99□□□□□ -1.77
RFC1-213ENST00000512275 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
RFC1-213ENST00000512275 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
RFC1-213ENST00000512275 A0A087WSZ3 146 aa3.98□□□□□ -1.77
RFC1-213ENST00000512275 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
RFC1-213ENST00000512275 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
RFC1-213ENST00000512275 Q6Q795 121 aa3.97□□□□□ -1.77
RFC1-213ENST00000512275 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
RFC1-213ENST00000512275 FAM240AA0A1B0GVK7 77 aa3.96□□□□□ -1.78
RFC1-213ENST00000512275 ACYP1P07311 99 aa3.95□□□□□ -1.78
RFC1-213ENST00000512275 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
RFC1-213ENST00000512275 CD164Q04900 197 aa3.95□□□□□ -1.78
RFC1-213ENST00000512275 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 DEFB116Q30KQ4 102 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 Q8N9L7 120 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
RFC1-213ENST00000512275 NREPQ16612 68 aa3.93□□□□□ -1.78
RFC1-213ENST00000512275 SPAG11AQ6PDA7 123 aa3.93□□□□□ -1.78
RFC1-213ENST00000512275 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
RFC1-213ENST00000512275 TNXBP22105 4242 aa3.92□□□□□ -1.78
RFC1-213ENST00000512275 A0A1B0GW54 56 aa3.92□□□□□ -1.78
RFC1-213ENST00000512275 SPINK1P00995 79 aa3.92□□□□□ -1.78
RFC1-213ENST00000512275 LIMD2Q9BT23 127 aa3.92□□□□□ -1.78
RFC1-213ENST00000512275 IGKV3D-7A0A0C4DH55 119 aa3.91□□□□□ -1.78
RFC1-213ENST00000512275 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 BPY2O14599 106 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 Q96NJ1 140 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 SIGMAR1Q99720 223 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 RETNLBQ9BQ08 111 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
RFC1-213ENST00000512275 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
RFC1-213ENST00000512275 RPS29P62273 56 aaKnown RBP3.89□□□□□ -1.79
RFC1-213ENST00000512275 C1orf195Q5TG92 126 aa3.89□□□□□ -1.79
RFC1-213ENST00000512275 Q5W150 140 aa3.89□□□□□ -1.79
RFC1-213ENST00000512275 Q5XG85 94 aa3.89□□□□□ -1.79
RFC1-213ENST00000512275 LINC00643Q86TS7 51 aa3.89□□□□□ -1.79
RFC1-213ENST00000512275 DMBT1Q9UGM3 2413 aaPredicted RBP3.88□□□□□ -1.79
RFC1-213ENST00000512275 MT-ATP8P03928 68 aa3.88□□□□□ -1.79
RFC1-213ENST00000512275 ASB16-AS1Q495Z4 193 aa3.88□□□□□ -1.79
RFC1-213ENST00000512275 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
RFC1-213ENST00000512275 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
RFC1-213ENST00000512275 J3KT08 172 aa3.86□□□□□ -1.79
RFC1-213ENST00000512275 K7EQZ3 153 aa3.86□□□□□ -1.79
RFC1-213ENST00000512275 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
RFC1-213ENST00000512275 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
RFC1-213ENST00000512275 A8MWP4 228 aa3.85□□□□□ -1.79
RFC1-213ENST00000512275 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
RFC1-213ENST00000512275 A0A087WVE0 104 aa3.84□□□□□ -1.79
RFC1-213ENST00000512275 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
RFC1-213ENST00000512275 NDUFB1O75438 58 aa3.83□□□□□ -1.8
RFC1-213ENST00000512275 V9GYY9 64 aa3.83□□□□□ -1.8
RFC1-213ENST00000512275 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
RFC1-213ENST00000512275 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
RFC1-213ENST00000512275 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
RFC1-213ENST00000512275 C9orf92A6NGG3 77 aa3.81□□□□□ -1.8
RFC1-213ENST00000512275 WFDC13Q8IUB5 93 aa3.81□□□□□ -1.8
RFC1-213ENST00000512275 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
RFC1-213ENST00000512275 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
RFC1-213ENST00000512275 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
RFC1-213ENST00000512275 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
RFC1-213ENST00000512275 PSPHP1O15172 72 aa3.79□□□□□ -1.8
RFC1-213ENST00000512275 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
RFC1-213ENST00000512275 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
RFC1-213ENST00000512275 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
RFC1-213ENST00000512275 LINC00313P59037 77 aa3.78□□□□□ -1.8
RFC1-213ENST00000512275 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
RFC1-213ENST00000512275 IMUPQ9GZP8 106 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms