RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
PCDHA4-202ENST00000512229 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
PCDHA4-202ENST00000512229 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
PCDHA4-202ENST00000512229 Q8N1X5 172 aa7.76□□□□□ -1.17
PCDHA4-202ENST00000512229 A0A087X002 238 aa7.74□□□□□ -1.17
PCDHA4-202ENST00000512229 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
PCDHA4-202ENST00000512229 UQCR11O14957 56 aa7.73□□□□□ -1.17
PCDHA4-202ENST00000512229 HRES1P13985 223 aa7.73□□□□□ -1.17
PCDHA4-202ENST00000512229 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
PCDHA4-202ENST00000512229 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
PCDHA4-202ENST00000512229 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.18
PCDHA4-202ENST00000512229 Q5VSD8 79 aa7.7□□□□□ -1.18
PCDHA4-202ENST00000512229 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
PCDHA4-202ENST00000512229 KRTAP29-1A8MX34 341 aaPredicted RBP7.68□□□□□ -1.18
PCDHA4-202ENST00000512229 Q5W150 140 aa7.67□□□□□ -1.18
PCDHA4-202ENST00000512229 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
PCDHA4-202ENST00000512229 RBM12B-AS1Q9P1G2 102 aa7.66□□□□□ -1.18
PCDHA4-202ENST00000512229 Q1T7F1 81 aa7.62□□□□□ -1.19
PCDHA4-202ENST00000512229 Q6ZSA8 131 aa7.62□□□□□ -1.19
PCDHA4-202ENST00000512229 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
PCDHA4-202ENST00000512229 NOTCH2NLQ7Z3S9 236 aa7.6□□□□□ -1.19
PCDHA4-202ENST00000512229 SRRM2Q9UQ35 2752 aaKnown RBP7.59□□□□□ -1.19
PCDHA4-202ENST00000512229 SPINK7P58062 85 aa7.59□□□□□ -1.2
PCDHA4-202ENST00000512229 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
PCDHA4-202ENST00000512229 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
PCDHA4-202ENST00000512229 FP248Q71RG6 208 aaPredicted RBP7.56□□□□□ -1.2
PCDHA4-202ENST00000512229 OXTP01178 125 aa7.54□□□□□ -1.2
PCDHA4-202ENST00000512229 Q5XG85 94 aa7.5□□□□□ -1.21
PCDHA4-202ENST00000512229 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
PCDHA4-202ENST00000512229 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
PCDHA4-202ENST00000512229 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
PCDHA4-202ENST00000512229 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
PCDHA4-202ENST00000512229 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
PCDHA4-202ENST00000512229 Q75L30 129 aa7.45□□□□□ -1.22
PCDHA4-202ENST00000512229 A0A1B0GU33 70 aa7.42□□□□□ -1.22
PCDHA4-202ENST00000512229 A0A0D9SG42 100 aa7.41□□□□□ -1.22
PCDHA4-202ENST00000512229 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
PCDHA4-202ENST00000512229 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
PCDHA4-202ENST00000512229 Q5VV11 94 aa7.38□□□□□ -1.23
PCDHA4-202ENST00000512229 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
PCDHA4-202ENST00000512229 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
PCDHA4-202ENST00000512229 KRTAP1-4P0C5Y4 121 aa7.36□□□□□ -1.23
PCDHA4-202ENST00000512229 S4R3F8 94 aa7.35□□□□□ -1.23
PCDHA4-202ENST00000512229 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
PCDHA4-202ENST00000512229 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
PCDHA4-202ENST00000512229 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
PCDHA4-202ENST00000512229 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
PCDHA4-202ENST00000512229 FBN3Q75N90 2809 aa7.27□□□□□ -1.25
PCDHA4-202ENST00000512229 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
PCDHA4-202ENST00000512229 M0R2T5 61 aa7.23□□□□□ -1.25
PCDHA4-202ENST00000512229 A8MUU9 505 aa7.2□□□□□ -1.26
PCDHA4-202ENST00000512229 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
PCDHA4-202ENST00000512229 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
PCDHA4-202ENST00000512229 LCA10Q71F78 164 aa7.18□□□□□ -1.26
PCDHA4-202ENST00000512229 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
PCDHA4-202ENST00000512229 R4GN34 69 aa7.16□□□□□ -1.26
PCDHA4-202ENST00000512229 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
PCDHA4-202ENST00000512229 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
PCDHA4-202ENST00000512229 A0A1B0GVY2 172 aa7.1□□□□□ -1.27
PCDHA4-202ENST00000512229 A8MU10 97 aa7.07□□□□□ -1.28
PCDHA4-202ENST00000512229 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
PCDHA4-202ENST00000512229 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
PCDHA4-202ENST00000512229 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
PCDHA4-202ENST00000512229 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
PCDHA4-202ENST00000512229 M0QZ58 72 aa7.04□□□□□ -1.28
PCDHA4-202ENST00000512229 XP32Q5T750 250 aa7.03□□□□□ -1.28
PCDHA4-202ENST00000512229 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
PCDHA4-202ENST00000512229 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
PCDHA4-202ENST00000512229 ROMO1P60602 79 aa6.9□□□□□ -1.3
PCDHA4-202ENST00000512229 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
PCDHA4-202ENST00000512229 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
PCDHA4-202ENST00000512229 DNHD1Q96M86 4753 aa6.85□□□□□ -1.31
PCDHA4-202ENST00000512229 A6NN06 94 aa6.82□□□□□ -1.32
PCDHA4-202ENST00000512229 ANK2Q01484 3957 aa6.78□□□□□ -1.32
PCDHA4-202ENST00000512229 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
PCDHA4-202ENST00000512229 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
PCDHA4-202ENST00000512229 DNAH9Q9NYC9 4486 aa6.67□□□□□ -1.34
PCDHA4-202ENST00000512229 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
PCDHA4-202ENST00000512229 H0YAA0 97 aa6.64□□□□□ -1.35
PCDHA4-202ENST00000512229 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
PCDHA4-202ENST00000512229 P0C880 135 aa6.6□□□□□ -1.35
PCDHA4-202ENST00000512229 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
PCDHA4-202ENST00000512229 LYSTQ99698 3801 aa6.59□□□□□ -1.35
PCDHA4-202ENST00000512229 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
PCDHA4-202ENST00000512229 PRKDCP78527 4128 aaKnown RBP6.56□□□□□ -1.36
PCDHA4-202ENST00000512229 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
PCDHA4-202ENST00000512229 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
PCDHA4-202ENST00000512229 H3BS24 57 aa6.53□□□□□ -1.36
PCDHA4-202ENST00000512229 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
PCDHA4-202ENST00000512229 STARD9Q9P2P6 4700 aa6.47□□□□□ -1.37
PCDHA4-202ENST00000512229 TNP1P09430 55 aa6.47□□□□□ -1.37
PCDHA4-202ENST00000512229 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
PCDHA4-202ENST00000512229 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
PCDHA4-202ENST00000512229 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
PCDHA4-202ENST00000512229 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
PCDHA4-202ENST00000512229 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
PCDHA4-202ENST00000512229 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
PCDHA4-202ENST00000512229 DNAH7Q8WXX0 4024 aa6.38□□□□□ -1.39
PCDHA4-202ENST00000512229 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
PCDHA4-202ENST00000512229 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms