RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 UBL5Q9BZL1 73 aa10.77□□□□□ -0.69
SMAD1-211ENST00000512019 C9orf92A6NGG3 77 aa10.76□□□□□ -0.69
SMAD1-211ENST00000512019 LINC00846Q9NV44 126 aa10.76□□□□□ -0.69
SMAD1-211ENST00000512019 Q6ZVQ6 151 aa10.75□□□□□ -0.69
SMAD1-211ENST00000512019 ACYP1P07311 99 aa10.74□□□□□ -0.69
SMAD1-211ENST00000512019 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
SMAD1-211ENST00000512019 NDUFB1O75438 58 aa10.72□□□□□ -0.69
SMAD1-211ENST00000512019 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
SMAD1-211ENST00000512019 A8MWP4 228 aa10.7□□□□□ -0.7
SMAD1-211ENST00000512019 BPY2O14599 106 aa10.7□□□□□ -0.7
SMAD1-211ENST00000512019 XP32Q5T750 250 aa10.69□□□□□ -0.7
SMAD1-211ENST00000512019 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
SMAD1-211ENST00000512019 J3QR89 54 aa10.67□□□□□ -0.7
SMAD1-211ENST00000512019 C8orf87E5RJ46 101 aa10.65□□□□□ -0.7
SMAD1-211ENST00000512019 DSCR10P59022 87 aa10.65□□□□□ -0.7
SMAD1-211ENST00000512019 LINC00313P59037 77 aa10.65□□□□□ -0.7
SMAD1-211ENST00000512019 IGKV3D-7A0A0C4DH55 119 aa10.63□□□□□ -0.71
SMAD1-211ENST00000512019 PRR15Q8IV56 129 aa10.62□□□□□ -0.71
SMAD1-211ENST00000512019 K7EQZ3 153 aa10.59□□□□□ -0.71
SMAD1-211ENST00000512019 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.72
SMAD1-211ENST00000512019 CXCL6P80162 114 aa10.57□□□□□ -0.72
SMAD1-211ENST00000512019 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
SMAD1-211ENST00000512019 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
SMAD1-211ENST00000512019 SEC61BP60468 96 aaKnown RBP10.55□□□□□ -0.72
SMAD1-211ENST00000512019 RPL37P61927 97 aaKnown RBP10.55□□□□□ -0.72
SMAD1-211ENST00000512019 ATP5EP2Q5VTU8 51 aa10.54□□□□□ -0.72
SMAD1-211ENST00000512019 Q75L30 129 aa10.54□□□□□ -0.72
SMAD1-211ENST00000512019 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
SMAD1-211ENST00000512019 Q8N9L7 120 aa10.53□□□□□ -0.72
SMAD1-211ENST00000512019 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
SMAD1-211ENST00000512019 KRTAP4-1Q9BYQ7 146 aa10.52□□□□□ -0.73
SMAD1-211ENST00000512019 MMP24-AS1A0A0U1RRL7 71 aa10.5□□□□□ -0.73
SMAD1-211ENST00000512019 A8MUU9 505 aa10.5□□□□□ -0.73
SMAD1-211ENST00000512019 K7ERU9 68 aa10.5□□□□□ -0.73
SMAD1-211ENST00000512019 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
SMAD1-211ENST00000512019 hDV103S1A0JD37 113 aa10.46□□□□□ -0.73
SMAD1-211ENST00000512019 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
SMAD1-211ENST00000512019 TMEM254Q8TBM7 123 aa10.45□□□□□ -0.74
SMAD1-211ENST00000512019 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
SMAD1-211ENST00000512019 CASC2Q6XLA1 102 aa10.42□□□□□ -0.74
SMAD1-211ENST00000512019 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
SMAD1-211ENST00000512019 HCG22E2RYF7 251 aa10.41□□□□□ -0.74
SMAD1-211ENST00000512019 WFDC13Q8IUB5 93 aa10.41□□□□□ -0.74
SMAD1-211ENST00000512019 Q8N9P0 234 aaPredicted RBP10.41□□□□□ -0.74
SMAD1-211ENST00000512019 HIST1H4AP62805 103 aaKnown RBP10.36□□□□□ -0.75
SMAD1-211ENST00000512019 NDUFS5O43920 106 aa10.34□□□□□ -0.75
SMAD1-211ENST00000512019 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
SMAD1-211ENST00000512019 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
SMAD1-211ENST00000512019 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
SMAD1-211ENST00000512019 A0A087WVE0 104 aa10.24□□□□□ -0.77
SMAD1-211ENST00000512019 KRTAP19-2Q3LHN2 52 aa10.23□□□□□ -0.77
SMAD1-211ENST00000512019 FSIP2Q5CZC0 6907 aa10.22□□□□□ -0.77
SMAD1-211ENST00000512019 IMUPQ9GZP8 106 aa10.2□□□□□ -0.78
SMAD1-211ENST00000512019 TP53AIP1Q9HCN2 124 aa10.2□□□□□ -0.78
SMAD1-211ENST00000512019 MT-ATP8P03928 68 aa10.19□□□□□ -0.78
SMAD1-211ENST00000512019 CRCT1Q9UGL9 99 aa10.19□□□□□ -0.78
SMAD1-211ENST00000512019 MT1HP80294 61 aa10.16□□□□□ -0.78
SMAD1-211ENST00000512019 Q5W150 140 aa10.13□□□□□ -0.79
SMAD1-211ENST00000512019 SPINK7P58062 85 aa10.09□□□□□ -0.79
SMAD1-211ENST00000512019 UQCRQO14949 82 aa10.06□□□□□ -0.8
SMAD1-211ENST00000512019 SCGB1A1P11684 91 aa10.05□□□□□ -0.8
SMAD1-211ENST00000512019 C7orf65Q6ZTY9 151 aa10.04□□□□□ -0.8
SMAD1-211ENST00000512019 IGKV2D-30A0A075B6S6 120 aa10.03□□□□□ -0.8
SMAD1-211ENST00000512019 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
SMAD1-211ENST00000512019 IGKV2-30P06310 120 aa10.03□□□□□ -0.8
SMAD1-211ENST00000512019 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
SMAD1-211ENST00000512019 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
SMAD1-211ENST00000512019 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
SMAD1-211ENST00000512019 HRES1P13985 223 aa10□□□□□ -0.81
SMAD1-211ENST00000512019 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
SMAD1-211ENST00000512019 OCR1Q9BZK8 76 aa10□□□□□ -0.81
SMAD1-211ENST00000512019 ATOX1O00244 68 aa9.97□□□□□ -0.81
SMAD1-211ENST00000512019 COX6B2Q6YFQ2 88 aa9.97□□□□□ -0.81
SMAD1-211ENST00000512019 RBM12B-AS1Q9P1G2 102 aa9.97□□□□□ -0.81
SMAD1-211ENST00000512019 FLGP20930 4061 aaPredicted RBP9.97□□□□□ -0.81
SMAD1-211ENST00000512019 H0Y9P7 68 aa9.95□□□□□ -0.82
SMAD1-211ENST00000512019 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
SMAD1-211ENST00000512019 LOC101927531A0A1B0GV80 90 aa9.93□□□□□ -0.82
SMAD1-211ENST00000512019 SMIM20Q8N5G0 67 aa9.93□□□□□ -0.82
SMAD1-211ENST00000512019 FAM236DA0A1B0GTK5 79 aa9.91□□□□□ -0.82
SMAD1-211ENST00000512019 FAM236CP0DP71 79 aa9.91□□□□□ -0.82
SMAD1-211ENST00000512019 MP68P56378 58 aa9.91□□□□□ -0.82
SMAD1-211ENST00000512019 M0R2T5 61 aa9.9□□□□□ -0.82
SMAD1-211ENST00000512019 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
SMAD1-211ENST00000512019 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
SMAD1-211ENST00000512019 TRAV7A0A075B6U4 112 aa9.85□□□□□ -0.83
SMAD1-211ENST00000512019 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
SMAD1-211ENST00000512019 H3BPC8 53 aa9.83□□□□□ -0.84
SMAD1-211ENST00000512019 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
SMAD1-211ENST00000512019 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
SMAD1-211ENST00000512019 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
SMAD1-211ENST00000512019 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
SMAD1-211ENST00000512019 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
SMAD1-211ENST00000512019 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
SMAD1-211ENST00000512019 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
SMAD1-211ENST00000512019 USH2AO75445 5202 aa9.59□□□□□ -0.88
SMAD1-211ENST00000512019 COX7CP15954 63 aa9.58□□□□□ -0.88
SMAD1-211ENST00000512019 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
SMAD1-211ENST00000512019 SSPOA2VEC9 5147 aa9.57□□□□□ -0.88
SMAD1-211ENST00000512019 KRTAP9-8Q9BYQ0 159 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms